Conservation of cofitness between b0726 and b2414 in Escherichia coli BW25113

65 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0726 sucA alpha-ketoglutarate decarboxylase (NCBI) 1.0 b2414 cysK cysteine synthase A, O-acetylserine sulfhydrolase A subunit (NCBI) 0.69 9
Escherichia coli ECRC102 1.00 NIAGMN_04975 sucA 2-oxoglutarate dehydrogenase E1 component 1.00 NIAGMN_19970 cysK cysteine synthase A
Escherichia coli ECRC98 1.00 JDDGAC_10580 sucA 2-oxoglutarate dehydrogenase E1 component 1.00 JDDGAC_26150 cysK cysteine synthase A
Escherichia coli ECRC101 1.00 MCAODC_26145 sucA 2-oxoglutarate dehydrogenase E1 component 1.00 MCAODC_12730 cysK cysteine synthase A
Escherichia fergusonii Becca 1.00 EFB2_03380 2-oxoglutarate dehydrogenase E1 component 1.00 EFB2_01462 Cysteine synthase A
Escherichia coli ECRC101 1.00 OKFHMN_06925 sucA 2-oxoglutarate dehydrogenase E1 component 1.00 OKFHMN_22200 cysK cysteine synthase A
Escherichia coli ECRC99 1.00 KEDOAH_21040 sucA 2-oxoglutarate dehydrogenase E1 component 1.00 KEDOAH_06020 cysK cysteine synthase A
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02991 2-oxoglutarate dehydrogenase E1 component 1.00 OHPLBJKB_01309 Cysteine synthase A low > 73
Escherichia coli BL21 1.00 ECD_00685 2-oxoglutarate decarboxylase, thiamine triphosphate-binding 1.00 ECD_02314 cysteine synthase A, O-acetylserine sulfhydrolase A subunit
Escherichia coli ECRC62 1.00 BNILDI_21310 sucA 2-oxoglutarate dehydrogenase E1 component 1.00 BNILDI_12745 cysK cysteine synthase A
Escherichia coli ECOR38 1.00 HEPCGN_01305 sucA 2-oxoglutarate dehydrogenase E1 component 1.00 HEPCGN_21380 cysK cysteine synthase A low > 85
Escherichia coli ECOR27 1.00 NOLOHH_23315 sucA 2-oxoglutarate dehydrogenase E1 component 1.00 NOLOHH_13880 cysK cysteine synthase A
Escherichia coli Nissle 1917 1.00 ECOLIN_RS03870 2-oxoglutarate dehydrogenase E1 component 1.00 ECOLIN_RS13870 cysteine synthase A
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.96 GFF4639 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) 0.94 GFF2044 Cysteine synthase (EC 2.5.1.47) low > 78
Enterobacter asburiae PDN3 0.95 EX28DRAFT_2266 2-oxoglutarate dehydrogenase, E1 component 0.93 EX28DRAFT_0214 cysteine synthase A
Enterobacter sp. TBS_079 0.94 MPMX20_01354 2-oxoglutarate dehydrogenase E1 component 0.93 MPMX20_03308 Cysteine synthase A low > 85
Klebsiella michiganensis M5al 0.94 BWI76_RS08415 2-oxoglutarate dehydrogenase subunit E1 0.94 BWI76_RS20640 cysteine synthase A
Pantoea sp. MT58 0.90 IAI47_13745 2-oxoglutarate dehydrogenase E1 component 0.90 IAI47_05440 cysteine synthase A low > 76
Serratia liquefaciens MT49 0.90 IAI46_06275 2-oxoglutarate dehydrogenase E1 component 0.82 IAI46_18445 cysteine synthase A low > 86
Rahnella sp. WP5 0.89 EX31_RS23440 2-oxoglutarate dehydrogenase E1 component 0.81 EX31_RS20175 cysteine synthase A 0.82 2
Dickeya dadantii 3937 0.89 DDA3937_RS06460 2-oxoglutarate dehydrogenase E1 component 0.86 DDA3937_RS04490 cysteine synthase A
Dickeya dianthicola ME23 0.89 DZA65_RS06845 2-oxoglutarate dehydrogenase E1 component 0.85 DZA65_RS04370 cysteine synthase A
Dickeya dianthicola 67-19 0.88 HGI48_RS06500 2-oxoglutarate dehydrogenase E1 component 0.85 HGI48_RS04450 cysteine synthase A
Erwinia tracheiphila SCR3 0.88 LU632_RS16095 sucA 2-oxoglutarate dehydrogenase E1 component 0.87 LU632_RS06625 cysK cysteine synthase A low > 74
Pectobacterium carotovorum WPP14 0.86 HER17_RS14930 2-oxoglutarate dehydrogenase E1 component 0.84 HER17_RS17170 cysteine synthase A
Vibrio cholerae E7946 ATCC 55056 0.73 CSW01_10430 2-oxoglutarate dehydrogenase subunit E1 0.78 CSW01_04945 cysteine synthase A
Shewanella loihica PV-4 0.71 Shew_1655 kgd alpha-ketoglutarate decarboxylase (RefSeq) 0.70 Shew_2382 cysteine synthase A (RefSeq)
Shewanella oneidensis MR-1 0.70 SO1930 sucA 2-oxoglutarate dehydrogenase, E1 component (NCBI ptt file) 0.73 SO2903 cysK cysteine synthase A (NCBI ptt file)
Shewanella sp. ANA-3 0.70 Shewana3_1710 sucA 2-oxoglutarate dehydrogenase E1 component (RefSeq) 0.73 Shewana3_1561 cysteine synthase (RefSeq)
Alteromonas macleodii MIT1002 0.70 MIT1002_01948 2-oxoglutarate dehydrogenase E1 component 0.71 MIT1002_02237 Cysteine synthase A
Shewanella amazonensis SB2B 0.69 Sama_1427 sucA 2-oxoglutarate dehydrogenase E1 component (RefSeq) 0.71 Sama_1508 cysteine synthase A (RefSeq)
Pseudomonas sp. RS175 0.60 PFR28_03096 2-oxoglutarate dehydrogenase E1 component 0.68 PFR28_00734 Cysteine synthase A
Pseudomonas fluorescens GW456-L13 0.60 PfGW456L13_4269 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) 0.67 PfGW456L13_4472 Cysteine synthase (EC 2.5.1.47)
Pseudomonas fluorescens FW300-N1B4 0.60 Pf1N1B4_3681 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) 0.67 Pf1N1B4_3374 Cysteine synthase (EC 2.5.1.47)
Pseudomonas fluorescens FW300-N2E2 0.60 Pf6N2E2_5855 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) 0.68 Pf6N2E2_2700 Cysteine synthase (EC 2.5.1.47)
Pseudomonas sp. S08-1 0.60 OH686_01970 oxoglutarate dehydrogenase (succinyl-transferring), E1 component 0.68 OH686_05215 cysteine synthase A
Pseudomonas fluorescens FW300-N2C3 0.60 AO356_19695 2-oxoglutarate dehydrogenase subunit E1 0.68 AO356_04305 cysteine synthase
Pseudomonas fluorescens FW300-N2E3 0.59 AO353_01835 2-oxoglutarate dehydrogenase subunit E1 0.68 AO353_18020 cysteine synthase
Pseudomonas stutzeri RCH2 0.59 Psest_2494 2-oxoglutarate dehydrogenase, E1 component 0.64 Psest_1855 cysteine synthase A
Marinobacter adhaerens HP15 0.59 HP15_1521 alpha-ketoglutarate decarboxylase 0.70 HP15_3453 cysteine synthase A
Pseudomonas syringae pv. syringae B728a 0.59 Psyr_2009 2-oxoglutarate dehydrogenase E1 component 0.66 Psyr_1583 cysteine synthase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.59 Psyr_2009 2-oxoglutarate dehydrogenase E1 component 0.66 Psyr_1583 cysteine synthase
Pseudomonas simiae WCS417 0.58 PS417_08895 2-oxoglutarate dehydrogenase 0.67 PS417_07505 cysteine synthase
Pseudomonas fluorescens SBW25 0.58 PFLU_RS08955 2-oxoglutarate dehydrogenase E1 component 0.66 PFLU_RS07585 cysteine synthase A
Pseudomonas fluorescens SBW25-INTG 0.58 PFLU_RS08955 2-oxoglutarate dehydrogenase E1 component 0.66 PFLU_RS07585 cysteine synthase A
Pseudomonas putida KT2440 0.58 PP_4189 2-oxoglutarate decarboxylase, thiamine-requiring E1 subunit 0.66 PP_4571 cysteine synthase A
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS12940 2-oxoglutarate dehydrogenase 0.36 RR42_RS21960 cysteine synthase
Dechlorosoma suillum PS 0.53 Dsui_2217 2-oxoglutarate dehydrogenase, E1 component 0.61 Dsui_2521 cysteine synthase A
Hydrogenophaga sp. GW460-11-11-14-LB1 0.52 GFF4878 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) 0.40 GFF4578 Cysteine synthase (EC 2.5.1.47)
Variovorax sp. SCN45 0.52 GFF979 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) 0.40 GFF4549 Cysteine synthase (EC 2.5.1.47)
Variovorax sp. OAS795 0.51 ABID97_RS14145 2-oxoglutarate dehydrogenase E1 component 0.40 ABID97_RS06080 cysteine synthase A
Acidovorax sp. GW101-3H11 0.51 Ac3H11_2467 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) 0.38 Ac3H11_1975 Cysteine synthase (EC 2.5.1.47)
Azospirillum brasilense Sp245 0.43 AZOBR_RS14075 MFS transporter 0.46 AZOBR_RS01080 cysteine synthase
Caulobacter crescentus NA1000 0.42 CCNA_00342 2-oxoglutarate dehydrogenase E1 component 0.41 CCNA_03740 cysteine synthase
Caulobacter crescentus NA1000 Δfur 0.42 CCNA_00342 2-oxoglutarate dehydrogenase E1 component 0.41 CCNA_03740 cysteine synthase
Azospirillum sp. SherDot2 0.42 MPMX19_00104 2-oxoglutarate dehydrogenase E1 component 0.44 MPMX19_00237 Cysteine synthase
Agrobacterium fabrum C58 0.42 Atu2636 oxoglutarate dehydrogenase E1 component 0.44 Atu0312 cysteine synthase
Bosea sp. OAE506 0.41 ABIE41_RS08975 2-oxoglutarate dehydrogenase E1 component 0.43 ABIE41_RS03545 cysteine synthase A
Dinoroseobacter shibae DFL-12 0.41 Dshi_2883 2-oxoglutarate dehydrogenase, E1 subunit (RefSeq) 0.29 Dshi_0891 cysteine synthase A (RefSeq)
Rhodopseudomonas palustris CGA009 0.41 TX73_000980 2-oxoglutarate dehydrogenase E1 component 0.44 TX73_002885 cysteine synthase A low > 86
Sinorhizobium meliloti 1021 0.41 SMc02482 2-oxoglutarate dehydrogenase E1 component 0.45 SMc00421 O-acetylserine sulfhydrylase A
Brevundimonas sp. GW460-12-10-14-LB2 0.41 A4249_RS14430 2-oxoglutarate dehydrogenase E1 component 0.45 A4249_RS10255 cysteine synthase A
Rhodospirillum rubrum S1H 0.41 Rru_A1213 kgd alpha-ketoglutarate decarboxylase (RefSeq) 0.48 Rru_A3794 Cysteine synthase (NCBI)
Magnetospirillum magneticum AMB-1 0.40 AMB_RS20040 2-oxoglutarate dehydrogenase E1 component 0.42 AMB_RS01005 cysteine synthase A
Sphingomonas koreensis DSMZ 15582 0.40 Ga0059261_1341 2-oxoglutarate dehydrogenase, E1 component 0.38 Ga0059261_3644 cysteine synthase A
Pontibacter actiniarum KMM 6156, DSM 19842 0.40 CA264_18485 2-oxoglutarate dehydrogenase subunit E1 0.39 CA264_13470 cysteine synthase A

Not shown: 23 genomes with orthologs for b0726 only; 12 genomes with orthologs for b2414 only