Conservation of cofitness between b1800 and b0439 in Escherichia coli BW25113

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b1800 yeaU predicted dehydrogenase (NCBI) 1.0 b0439 lon DNA-binding ATP-dependent protease La (NCBI) 0.24 9
Escherichia coli ECRC62 1.00 BNILDI_15930 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 1.00 BNILDI_22670 lon_P403L Lon protease — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01933 D-malate dehydrogenase [decarboxylating] 1.00 OHPLBJKB_03234 Lon protease low > 73
Escherichia coli ECRC99 1.00 KEDOAH_01485 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 1.00 KEDOAH_19645 Lon protease — —
Escherichia coli ECRC101 1.00 OKFHMN_26625 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 1.00 OKFHMN_08320 Lon protease — —
Escherichia coli ECRC102 1.00 NIAGMN_01440 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 1.00 NIAGMN_06375 Lon protease — —
Escherichia coli ECRC98 1.00 JDDGAC_01200 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 1.00 JDDGAC_11975 Lon protease — —
Escherichia coli ECRC101 1.00 MCAODC_18785 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 1.00 MCAODC_27545 Lon protease — —
Escherichia coli BL21 1.00 ECD_01770 D-malate oxidase, NAD-dependent; putative tartrate dehydrogenase 1.00 ECD_00391 DNA-binding ATP-dependent protease La low > 60
Escherichia coli ECOR27 1.00 NOLOHH_17145 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 1.00 NOLOHH_01255 lon_P403L Lon protease — —
Escherichia coli ECOR38 1.00 HEPCGN_05015 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 1.00 HEPCGN_06935 lon_P403L Lon protease low > 85
Klebsiella michiganensis M5al 0.89 BWI76_RS10680 tartrate dehydrogenase 0.98 BWI76_RS06535 endopeptidase La low > 92
Serratia liquefaciens MT49 0.84 IAI46_21025 tartrate dehydrogenase 0.94 IAI46_05020 endopeptidase La low > 86
Pseudomonas fluorescens FW300-N2E3 0.80 AO353_28225 tartrate dehydrogenase 0.70 AO353_20185 DNA-binding protein low > 101
Pseudomonas fluorescens FW300-N1B4 0.79 Pf1N1B4_4932 Tartrate dehydrogenase (EC 1.1.1.93) / Tartrate decarboxylase (EC 4.1.1.73) / D-malic enzyme (EC 1.1.1.83) 0.70 Pf1N1B4_3947 ATP-dependent protease La (EC 3.4.21.53) Type I — —
Pseudomonas fluorescens FW300-N2C3 0.78 AO356_26735 tartrate dehydrogenase 0.70 AO356_01740 DNA-binding protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.78 Pf6N2E2_369 Tartrate dehydrogenase (EC 1.1.1.93) @ Tartrate decarboxylase (EC 4.1.1.73) @ D-malic enzyme (EC 1.1.1.83) 0.70 Pf6N2E2_2216 ATP-dependent protease La (EC 3.4.21.53) Type I — —
Pseudomonas fluorescens SBW25 0.78 PFLU_RS19735 tartrate dehydrogenase 0.69 PFLU_RS19160 endopeptidase La low > 109
Pseudomonas fluorescens SBW25-INTG 0.78 PFLU_RS19735 tartrate dehydrogenase 0.69 PFLU_RS19160 endopeptidase La low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.77 Psyr_2396 Tartrate dehydrogenase 0.69 Psyr_1749 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 low > 86
Pseudomonas syringae pv. syringae B728a 0.77 Psyr_2396 Tartrate dehydrogenase 0.69 Psyr_1749 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 low > 86
Herbaspirillum seropedicae SmR1 0.75 HSERO_RS07390 tartrate dehydrogenase 0.68 HSERO_RS12905 peptidase — —
Ralstonia solanacearum PSI07 0.74 RPSI07_RS04610 tartrate dehydrogenase 0.70 RPSI07_RS16135 endopeptidase La — —
Ralstonia sp. UNC404CL21Col 0.74 ABZR87_RS21505 tartrate dehydrogenase 0.70 ABZR87_RS12785 endopeptidase La low > 80
Ralstonia solanacearum IBSBF1503 0.74 RALBFv3_RS18940 tartrate dehydrogenase 0.70 RALBFv3_RS01340 endopeptidase La — —
Ralstonia solanacearum UW163 0.74 UW163_RS20190 tartrate dehydrogenase 0.70 UW163_RS14650 endopeptidase La — —
Acidovorax sp. GW101-3H11 0.73 Ac3H11_3259 Tartrate dehydrogenase (EC 1.1.1.93) @ Tartrate decarboxylase (EC 4.1.1.73) @ D-malic enzyme (EC 1.1.1.83) 0.67 Ac3H11_937 ATP-dependent protease La (EC 3.4.21.53) Type I low > 79
Variovorax sp. OAS795 0.73 ABID97_RS25885 tartrate dehydrogenase 0.67 ABID97_RS17590 endopeptidase La low > 91
Ralstonia solanacearum GMI1000 0.72 RS_RS24845 tartrate dehydrogenase 0.70 RS_RS08655 endopeptidase La — —
Castellaniella sp019104865 MT123 0.72 ABCV34_RS14695 tartrate dehydrogenase 0.67 ABCV34_RS05125 endopeptidase La — —
Paraburkholderia sabiae LMG 24235 0.72 QEN71_RS32005 tartrate dehydrogenase 0.68 QEN71_RS21975 endopeptidase La low > 153
Burkholderia phytofirmans PsJN 0.71 BPHYT_RS30235 tartrate dehydrogenase 0.68 BPHYT_RS09460 peptidase — —
Paraburkholderia graminis OAS925 0.71 ABIE53_005023 tartrate dehydrogenase/decarboxylase/D-malate dehydrogenase 0.66 ABIE53_002117 ATP-dependent Lon protease low > 113
Paraburkholderia bryophila 376MFSha3.1 0.71 H281DRAFT_06345 tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase 0.68 H281DRAFT_00898 ATP-dependent proteinase. Serine peptidase. MEROPS family S16 — —
Pantoea sp. MT58 0.67 IAI47_17525 tartrate dehydrogenase 0.93 IAI47_14645 endopeptidase La — —
Cupriavidus basilensis FW507-4G11 0.66 RR42_RS02600 tartrate dehydrogenase 0.67 RR42_RS09030 DNA-binding protein — —
Bosea sp. OAE506 0.66 ABIE41_RS22540 tartrate dehydrogenase 0.61 ABIE41_RS18050 endopeptidase La — —
Dickeya dadantii 3937 0.66 DDA3937_RS04645 tartrate dehydrogenase 0.94 DDA3937_RS05650 endopeptidase La low > 74
Dinoroseobacter shibae DFL-12 0.66 Dshi_0775 tartrate dehydrogenase (RefSeq) 0.60 Dshi_1777 ATP-dependent protease La (RefSeq) low > 64
Dickeya dianthicola ME23 0.66 DZA65_RS04525 tartrate dehydrogenase 0.93 DZA65_RS06020 endopeptidase La low > 75
Variovorax sp. SCN45 0.66 GFF2854 D-malate dehydrogenase [decarboxylating] (EC 1.1.1.83) 0.65 GFF487 ATP-dependent protease La (EC 3.4.21.53) Type I low > 127
Rhodopseudomonas palustris CGA009 0.66 TX73_008960 tartrate dehydrogenase 0.64 TX73_015345 endopeptidase La — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.65 GFF3852 Tartrate dehydrogenase (EC 1.1.1.93) / Tartrate decarboxylase (EC 4.1.1.73) / D-malic enzyme (EC 1.1.1.83) 0.67 GFF4044 ATP-dependent protease La (EC 3.4.21.53) Type I 0.44 58
Dickeya dianthicola 67-19 0.65 HGI48_RS04605 tartrate dehydrogenase 0.93 HGI48_RS05695 endopeptidase La low > 71
Phaeobacter inhibens DSM 17395 0.55 PGA1_c17990 D-malate dehydrogenase 0.60 PGA1_c20540 ATP-dependent protease La — —
Magnetospirillum magneticum AMB-1 0.49 AMB_RS16020 tartrate dehydrogenase 0.66 AMB_RS14035 endopeptidase La — —
Agrobacterium fabrum C58 0.46 Atu3402 3-isopropylmalate dehydrogenase 0.63 Atu1261 ATP-dependent protease LA — —
Sinorhizobium meliloti 1021 0.45 SMa1846 3-isopropylmalate dehydrogenase 0.63 SMc01905 ATP-dependent protease LA protein — —
Azospirillum sp. SherDot2 0.45 MPMX19_06850 putative tartrate dehydrogenase/decarboxylase TtuC' 0.66 MPMX19_01545 Lon protease low > 112
Marinobacter adhaerens HP15 0.35 HP15_817 3-isopropylmalate dehydrogenase 0.67 HP15_2183 DNA-binding ATP-dependent protease La low > 73
Dyella japonica UNC79MFTsu3.2 0.28 ABZR86_RS00740 isocitrate dehydrogenase 0.67 ABZR86_RS07320 endopeptidase La — —
Lysobacter sp. OAE881 0.27 ABIE51_RS14200 isocitrate dehydrogenase 0.67 ABIE51_RS14145 endopeptidase La — —
Rhodanobacter denitrificans FW104-10B01 0.27 LRK54_RS15050 isocitrate dehydrogenase 0.66 LRK54_RS16735 endopeptidase La — —
Xanthomonas campestris pv. campestris strain 8004 0.27 Xcc-8004.4057.1 Isocitrate dehydrogenase [NAD] (EC 1.1.1.41) 0.66 Xcc-8004.4046.1 ATP-dependent protease La (EC 3.4.21.53) Type I — —
Rhodanobacter denitrificans MT42 0.27 LRK55_RS14765 isocitrate dehydrogenase 0.66 LRK55_RS16460 endopeptidase La — —
Rhodanobacter sp. FW510-T8 0.26 OKGIIK_03810 leuB isocitrate dehydrogenase 0.66 OKGIIK_08030 lon endopeptidase La — —

Not shown: 4 genomes with orthologs for b1800 only; 42 genomes with orthologs for b0439 only