| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Mycobacterium tuberculosis H37Rv | Rv1364c | | Possible sigma factor regulatory protein | sig. | 100 | 100 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.2114.1 | | histidine kinase/response regulator hybrid protein | insig. | 40 | 21 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS06580 | | HWE histidine kinase domain-containing protein | strong | 39 | 21 |
| | Azospirillum sp. SherDot2 | MPMX19_05885 | | Sensor histidine kinase RcsC | insig. | 38 | 21 |
| | Pseudomonas stutzeri RCH2 | Psest_2411 | | PAS domain S-box | sig. | 37 | 20 |
| | Azospirillum brasilense Sp245 | AZOBR_RS31670 | | hypothetical protein | insig. | 34 | 24 |
| | Azospirillum sp. SherDot2 | MPMX19_02821 | | Sensor histidine kinase RcsC | insig. | 37 | 19 |
| | Pseudomonas stutzeri RCH2 | Psest_4139 | | PAS domain S-box | sig. | 29 | 25 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVUA0099 | | HAMP domain protein (TIGR) | insig. | 30 | 39 |
| | Xanthobacter sp. DMC5 | GFF4183 | | hypothetical protein | insig. | 33 | 30 |
| | Lysobacter sp. OAE881 | ABIE51_RS15200 | | PAS domain-containing protein | insig. | 37 | 21 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS05675 | | Serine phosphatase RsbU regulator sigma subunit | insig. | 30 | 32 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS13255 | | SpoIIE family protein phosphatase | insig. | 29 | 36 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS08215 | | PAS domain-containing protein | cofit | 33 | 25 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.3197.1 | | Histidine kinase/response regulator hybrid protein | insig. | 33 | 24 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS12450 | | histidine kinase | cofit | 34 | 18 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS20310 | | PP2C family protein-serine/threonine phosphatase | insig. | 26 | 43 |
| | Fusobacterium nucleatum SB010 | HUW76_06690 | | PP2C family protein-serine/threonine phosphatase | strong | 27 | 36 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS08215 | | PAS domain-containing protein | cofit | 32 | 21 |
| | Pseudomonas stutzeri RCH2 | Psest_0693 | | His Kinase A (phosphoacceptor) domain./PAS fold./Response regulator receiver domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | strong | 33 | 23 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS05510 | | PP2C family protein-serine/threonine phosphatase | no data | 26 | 35 |
| | Bosea sp. OAE506 | ABIE41_RS10310 | | PAS domain S-box protein | insig. | 32 | 19 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS15800 | | PP2C family protein-serine/threonine phosphatase | insig. | 31 | 25 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_03900 | | serine/threonine protein phosphatase | sig. | 27 | 44 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2410 | | protein serine/threonine phosphatase (RefSeq) | insig. | 31 | 30 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_17130 | | histidine kinase | insig. | 32 | 21 |
| | Rhizobium sp. OAE497 | ABIE40_RS30340 | | response regulator | insig. | 29 | 21 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS17805 | | HAMP domain-containing protein | cofit | 27 | 33 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS06650 | | hypothetical protein | insig. | 29 | 20 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4462 | | Serine phosphatase RsbU, regulator of sigma subunit | insig. | 32 | 26 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS17190 | | PP2C family protein-serine/threonine phosphatase | cofit | 29 | 28 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS10220 | | PAS domain S-box protein | cofit | 33 | 19 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS01690 | | serine phosphatase | insig. | 29 | 40 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS20390 | | SpoIIE family protein phosphatase | insig. | 25 | 53 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_0084 | | Serine phosphatase RsbU, regulator of sigma subunit | strong | 25 | 32 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS06270 | | SpoIIE family protein phosphatase | insig. | 28 | 41 |
| | Azospirillum brasilense Sp245 | AZOBR_RS21970 | | protein phosphatase | insig. | 28 | 42 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.748.1 | | Serine phosphatase RsbU, regulator of sigma subunit | insig. | 29 | 32 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0254 | | response regulator receiver modulated serine phosphatase (RefSeq) | sig. | 25 | 31 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_2473 | | serine phosphatase | no data | 25 | 26 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_04080 | | PAS domain-containing sensor histidine kinase | insig. | 32 | 20 |
| | Azospirillum sp. SherDot2 | MPMX19_05007 | | hypothetical protein | insig. | 30 | 30 |
| | Azospirillum sp. SherDot2 | MPMX19_01958 | | Protein-glutamate methylesterase/protein-glutamine glutaminase | insig. | 29 | 31 |
| | Shewanella sp. ANA-3 | Shewana3_2013 | | response regulator receiver modulated serine phosphatase (RefSeq) | cofit | 25 | 36 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS07875 | | PAS domain-containing sensor histidine kinase | insig. | 30 | 22 |
| | Xanthobacter sp. DMC5 | GFF1909 | | hypothetical protein | insig. | 30 | 22 |
| | Azospirillum brasilense Sp245 | AZOBR_RS14285 | | transcriptional regulator | strong | 27 | 45 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_06202 | | PAS domain S-box-containing protein | insig. | 28 | 19 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS23280 | | PAS domain-containing sensor histidine kinase | insig. | 29 | 22 |
| | Ralstonia solanacearum UW163 | UW163_RS16530 | | PAS domain-containing sensor histidine kinase | insig. | 29 | 22 |
| | Azospirillum brasilense Sp245 | AZOBR_RS12605 | | regulator | insig. | 30 | 32 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_0637 | | Serine phosphatase RsbU, regulator of sigma subunit | strong | 28 | 28 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS14395 | | hypothetical protein | insig. | 35 | 14 |
| | Acinetobacter baumannii LAC-4 | RR41_RS15865 | | RsbU family protein phosphatase GigA | insig. | 26 | 30 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS08215 | | PAS domain-containing protein | cofit | 29 | 21 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS14395 | | hypothetical protein | insig. | 27 | 17 |
| | Marinobacter adhaerens HP15 | HP15_p187g14 | | protein containing sporulation stage II, protein E C-terminal domain | strong | 26 | 35 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS12335 | | hypothetical protein | insig. | 35 | 14 |
| | Acinetobacter radioresistens SK82 | MPMX26_00582 | | hypothetical protein | no data | 27 | 17 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c34880 | | putative response regulator | strong | 23 | 36 |
| | Paraburkholderia graminis OAS925 | ABIE53_005539 | | signal transduction histidine kinase/CheY-like chemotaxis protein | insig. | 29 | 21 |
| | Ralstonia solanacearum GMI1000 | RS_RS25145 | | hybrid sensor histidine kinase/response regulator | cofit | 28 | 22 |
| | Cellulophaga baltica 18 | M666_RS20015 | | PAS domain-containing sensor histidine kinase | insig. | 30 | 15 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_15825 | | hypothetical protein | insig. | 29 | 20 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_1146 | | Serine phosphatase RsbU, regulator of sigma subunit | insig. | 26 | 35 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS02075 | | ATP-binding protein | insig. | 41 | 14 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS13380 | | fused response regulator/phosphatase | insig. | 32 | 23 |
| | Dechlorosoma suillum PS | Dsui_1715 | | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | cofit | 26 | 31 |
| | Pseudomonas protegens RBAN4 | FABNJH_11540 | | histidine kinase | insig. | 26 | 23 |
| | Pseudomonas stutzeri RCH2 | Psest_2379 | | PAS domain S-box | strong | 25 | 23 |
| | Sinorhizobium meliloti 1021 | SM_b20450 | | regulatory protein | sig. | 24 | 42 |
| | Sphingobium sp. HT1-2 | GFF2585 | | Two-component system sensor histidine kinase/response regulator hybrid | insig. | 34 | 18 |
| | Azospirillum sp. SherDot2 | MPMX19_00501 | | Protein-glutamate methylesterase/protein-glutamine glutaminase | insig. | 28 | 31 |
| | Azospirillum brasilense Sp245 | AZOBR_RS14305 | | transcriptional regulator | cofit | 27 | 37 |
| | Azospirillum brasilense Sp245 | AZOBR_RS28395 | | hypothetical protein | insig. | 36 | 15 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS12335 | | hypothetical protein | insig. | 27 | 23 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS14395 | | hypothetical protein | insig. | 34 | 15 |
| | Azospirillum sp. SherDot2 | MPMX19_04555 | | Sensor histidine kinase RcsC | insig. | 31 | 19 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.1458.1 | | Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) | insig. | 27 | 25 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS02080 | | PAS domain-containing protein | insig. | 30 | 18 |
| | Azospirillum sp. SherDot2 | MPMX19_01262 | | hypothetical protein | insig. | 28 | 31 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_22345 | | ATPase | sig. | 26 | 23 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0252 | | anti-sigma-factor antagonist (RefSeq) | strong | 36 | 11 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.2114.1 | | histidine kinase/response regulator hybrid protein | insig. | 30 | 18 |
| | Pseudomonas aeruginosa MRSN321 | PFGADD_03886 | | histidine kinase | sig. | 37 | 12 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_05870 | | hybrid sensor histidine kinase/response regulator | sig. | 37 | 12 |
| | Pseudomonas aeruginosa PUPa3 | NPBIFN_03937 | | histidine kinase | insig. | 37 | 12 |
| | Rhodopseudomonas palustris CGA009 | TX73_002905 | | PAS domain-containing protein | insig. | 30 | 17 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_10745 | | hypothetical protein | insig. | 26 | 22 |
| | Rhodospirillum rubrum S1H | Rru_A0099 | | Serine phosphatase (NCBI) | insig. | 25 | 27 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01884 | | two-component system, chemotaxis family, CheB/CheR fusion protein | insig. | 26 | 21 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01418 | | Signal transduction histidine kinase | insig. | 27 | 21 |
| | Agrobacterium fabrum C58 | Atu5528 | | two component sensor kinase | insig. | 33 | 15 |
| | Dechlorosoma suillum PS | Dsui_2547 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | insig. | 29 | 20 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS01685 | | anti-sigma factor antagonist | insig. | 37 | 12 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3531 | | Sensory box histidine kinase/response regulator | strong | 25 | 23 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_1912 | | Response regulator receiver:Stage II sporulation E | no data | 24 | 34 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1912 | | Response regulator receiver:Stage II sporulation E | no data | 24 | 34 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS17900 | | serine phosphatase | insig. | 25 | 22 |