Homologs of RR42_RS29055 from Cupriavidus basilensis FW507-4G11

AraC family transcriptional regulator
SEED: Transcriptional regulator PobR, AraC family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Cupriavidus basilensis FW507-4G11 RR42_RS29055 AraC family transcriptional regulator strong 100 100
o Castellaniella sp019104865 MT123 ABCV34_RS06925 helix-turn-helix domain-containing protein insig. 38 98
o Paraburkholderia sabiae LMG 24235 QEN71_RS15620 helix-turn-helix domain-containing protein insig. 40 95
o Pseudomonas putida KT2440 PP_3538 transcriptional regulator strong 37 95
o Rhizobium sp. OAE497 ABIE40_RS19570 helix-turn-helix domain-containing protein strong 41 97
o Pseudomonas sp. BP01 JOY50_RS27470 helix-turn-helix domain-containing protein insig. 36 95
  Paraburkholderia sabiae LMG 24235 QEN71_RS39060 helix-turn-helix domain-containing protein insig. 38 99
o Pseudomonas sp. SVBP6 COO64_RS26250 helix-turn-helix domain-containing protein insig. 39 95
o Pseudomonas fluorescens SBW25 PFLU_RS07430 helix-turn-helix domain-containing protein insig. 37 97
o Pseudomonas fluorescens SBW25-INTG PFLU_RS07430 helix-turn-helix domain-containing protein strong 37 97
o Pseudomonas syringae pv. syringae B728a Psyr_3499 transcriptional regulator, AraC family insig. 35 95
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3499 transcriptional regulator, AraC family insig. 35 95
o Paraburkholderia graminis OAS925 ABIE53_001115 AraC family transcriptional activator of pobA insig. 38 95
o Pseudomonas simiae WCS417 PS417_07325 AraC family transcriptional regulator insig. 37 97
  Pseudomonas sp. BP01 JOY50_RS21410 helix-turn-helix domain-containing protein insig. 38 96
o Pseudomonas aeruginosa PA14 IKLFDK_24340 AraC family transcriptional regulator insig. 37 95
o Azospirillum sp. SherDot2 MPMX19_05530 hypothetical protein insig. 38 95
o Klebsiella pneumoniae MKP103 KDGMDA_12295 AraC family transcriptional regulator insig. 35 96
  Castellaniella sp019104865 MT123 ABCV34_RS02730 helix-turn-helix domain-containing protein insig. 36 97
o Pseudomonas sp. DMC3 GFF5054 HTH-type transcriptional activator RhaS cofit 34 97
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.465.1 Transcriptional regulator PobR, AraC family insig. 39 95
o Pseudomonas sp. RS175 PFR28_00546 HTH-type transcriptional activator RhaS strong 35 95
o Pseudomonas fluorescens FW300-N2E3 AO353_03890 AraC family transcriptional regulator insig. 34 97
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_702 Transcriptional regulator PobR, AraC family insig. 32 97
o Azospirillum brasilense Sp245 AZOBR_RS28145 putative transcriptional regulator AraC/XylS family insig. 38 96
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01603 HTH-type transcriptional activator RhaS insig. 36 97
o Pseudomonas fluorescens FW300-N2C3 AO356_05290 AraC family transcriptional regulator insig. 35 95
o Phaeobacter inhibens DSM 17395 PGA1_c02800 putative transcriptional regulator, AraC family strong 36 96
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2913 Transcriptional regulator PobR, AraC family strong 33 95
o Pseudomonas stutzeri RCH2 Psest_2188 AraC-type DNA-binding domain-containing proteins sig. 36 95
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1788 Transcriptional regulator PobR, AraC family insig. 33 97
o Acidovorax sp. GW101-3H11 Ac3H11_3419 Transcriptional regulator PobR, AraC family insig. 38 98
o Sphingobium sp. HT1-2 GFF2375 hypothetical protein cofit 34 95
o Herbaspirillum seropedicae SmR1 HSERO_RS19910 AraC family transcriptional regulator insig. 37 95
  Castellaniella sp019104865 MT123 ABCV34_RS02740 helix-turn-helix domain-containing protein insig. 34 95
o Caulobacter crescentus NA1000 CCNA_02486 AraC-family transcriptional regulator insig. 34 95
o Caulobacter crescentus NA1000 Δfur CCNA_02486 AraC-family transcriptional regulator cofit 34 95
o Agrobacterium fabrum C58 Atu4545 AraC family transcriptional regulator sig. 33 95
  Castellaniella sp019104865 MT123 ABCV34_RS06745 4-hydroxyphenylacetate catabolism regulatory protein HpaA insig. 34 88
  Pseudomonas aeruginosa PA14 IKLFDK_21220 4-hydroxyphenylacetate catabolism regulatory protein HpaA insig. 33 89
o Rhodopseudomonas palustris CGA009 TX73_005185 helix-turn-helix domain-containing protein cofit 33 95
  Paraburkholderia sabiae LMG 24235 QEN71_RS39670 helix-turn-helix domain-containing protein insig. 32 96
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF447 Transcriptional regulator, AraC family insig. 35 86
  Klebsiella pneumoniae MKP103 KDGMDA_12085 4-hydroxyphenylacetate catabolism regulatory protein HpaA insig. 32 89
  Pseudomonas sp. SVBP6 COO64_RS13800 hpaA 4-hydroxyphenylacetate catabolism regulatory protein HpaA insig. 32 89
  Paraburkholderia graminis OAS925 ABIE53_006323 AraC family transcriptional activator of pobA insig. 31 97
  Pseudomonas fluorescens SBW25 PFLU_RS15915 4-hydroxyphenylacetate catabolism regulatory protein HpaA insig. 29 89
  Pseudomonas fluorescens SBW25-INTG PFLU_RS15915 4-hydroxyphenylacetate catabolism regulatory protein HpaA strong 29 89
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02389 hypothetical protein cofit 30 89
  Pseudomonas simiae WCS417 PS417_17825 AraC family transcriptional regulator insig. 32 95
  Pseudomonas fluorescens FW300-N2C3 AO356_25600 AraC family transcriptional regulator insig. 31 89
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_03710 AraC family transcriptional regulator insig. 28 94
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1306 Transcriptional activator of 4-hydroxyphenylacetate 3-monooxygenase operon, XylS/AraC family insig. 31 89
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_18840 AraC family transcriptional regulator sig. 32 83
o Escherichia coli ECRC62 BNILDI_07850 hpaA 4-hydroxyphenylacetate catabolism regulatory protein HpaA insig. 31 89
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03717 HTH-type transcriptional activator RhaR insig. 31 89
o Escherichia coli BL21 ECD_04223 HpaA insig. 31 89
o Escherichia coli ECOR27 NOLOHH_03750 hpaA 4-hydroxyphenylacetate catabolism regulatory protein HpaA insig. 31 89
o Serratia liquefaciens MT49 IAI46_02765 4-hydroxyphenylacetate catabolism regulatory protein HpaA insig. 30 89
o Klebsiella michiganensis M5al BWI76_RS03835 4-hydroxyphenylacetate catabolism regulatory protein HpaA insig. 30 89
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_03705 AraC family transcriptional regulator insig. 29 91
o Enterobacter sp. TBS_079 MPMX20_00635 HTH-type transcriptional activator RhaR insig. 30 89
  Castellaniella sp019104865 MT123 ABCV34_RS05155 4-hydroxyphenylacetate catabolism regulatory protein HpaA insig. 37 79
o Enterobacter asburiae PDN3 EX28DRAFT_3540 4-hydroxyphenylacetate catabolism regulatory protein HpaA insig. 30 89
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS21715 AraC family transcriptional regulator insig. 32 83
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3285 Transcriptional activator of 4-hydroxyphenylacetate 3-monooxygenase operon, XylS/AraC family insig. 32 89
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS13170 helix-turn-helix domain-containing protein insig. 28 93
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_10555 AraC family transcriptional regulator insig. 26 91
o Cellulophaga baltica 18 M666_RS14335 helix-turn-helix domain-containing protein insig. 27 83
  Cellulophaga baltica 18 M666_RS02200 helix-turn-helix domain-containing protein insig. 24 99
  Cellulophaga baltica 18 M666_RS04530 AraC family transcriptional regulator insig. 25 83
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS12250 helix-turn-helix domain-containing protein insig. 29 90
  Phaeobacter inhibens DSM 17395 PGA1_c14190 putative transcriptional regulator, AraC family strong 27 82
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2924 AraC-type DNA-binding domain-containing proteins insig. 26 83
  Cellulophaga baltica 18 M666_RS16180 helix-turn-helix domain-containing protein insig. 26 81
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS03815 AraC family transcriptional regulator insig. 27 83
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3534 AraC-type DNA-binding domain-containing proteins insig. 42 32
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS19510 helix-turn-helix domain-containing protein insig. 31 53
  Cellulophaga baltica 18 M666_RS16805 helix-turn-helix domain-containing protein insig. 24 83
  Cellulophaga baltica 18 M666_RS17520 helix-turn-helix transcriptional regulator insig. 23 83
  Dinoroseobacter shibae DFL-12 Dshi_1491 transcriptional regulator, AraC family (RefSeq) insig. 36 45
o Bacteroides thetaiotaomicron VPI-5482 BT1385 transcriptional regulator (NCBI ptt file) sig. 25 81
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS01545 helix-turn-helix domain-containing protein strong 43 31
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_03675 hypothetical protein sig. 38 42
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4993.1 hypothetical protein insig. 28 82
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS07260 helix-turn-helix transcriptional regulator insig. 31 43
  Bacteroides thetaiotaomicron VPI-5482 BT2226 transcriptional regulator (NCBI ptt file) insig. 26 79
  Bacteroides ovatus ATCC 8483 BACOVA_00710 transcriptional regulator, AraC family insig. 31 33
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS00665 AraC family transcriptional regulator insig. 24 81
  Bacteroides stercoris CC31F HMPREF1181_RS10625 AraC family transcriptional regulator cofit 31 55
  Cellulophaga baltica 18 M666_RS04065 helix-turn-helix domain-containing protein insig. 25 76
  Bacteroides thetaiotaomicron VPI-5482 BT1797 putative transcriptional regulator (NCBI ptt file) insig. 26 49
  Agrobacterium fabrum C58 Atu4644 AraC family transcriptional regulator insig. 35 53
  Bacteroides thetaiotaomicron VPI-5482 BT0995 transcription regulator, AraC-type (NCBI ptt file) insig. 23 79
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12365 AraC family transcriptional regulator insig. 27 79
  Bacteroides ovatus ATCC 8483 BACOVA_02013 transcriptional regulator, AraC family insig. 21 80
  Bacteroides ovatus ATCC 8483 BACOVA_04278 transcriptional regulator, AraC family insig. 32 54
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS15720 helix-turn-helix transcriptional regulator strong 29 53
o Dickeya dianthicola ME23 DZA65_RS07400 helix-turn-helix domain-containing protein insig. 24 81
o Rahnella sp. WP5 EX31_RS10900 helix-turn-helix domain-containing protein insig. 23 87