| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
|---|
| | Cupriavidus basilensis FW507-4G11 | RR42_RS06550 | | LuxR family transcriptional regulator | insig. | 100 | 100 |
| o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS01835 | | LuxR family transcriptional regulator | insig. | 78 | 100 |
| o | Ralstonia solanacearum UW163 | UW163_RS15145 | | LuxR family transcriptional regulator | insig. | 78 | 100 |
| o | Ralstonia solanacearum PSI07 | RPSI07_RS15655 | | PAS domain-containing protein | insig. | 78 | 100 |
| o | Ralstonia solanacearum GMI1000 | RS_RS07900 | | PAS domain-containing protein | insig. | 78 | 100 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS13775 | | LuxR C-terminal-related transcriptional regulator | insig. | 76 | 100 |
| o | Paraburkholderia graminis OAS925 | ABIE53_002910 | | PAS domain S-box-containing protein | insig. | 72 | 100 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS13680 | | LuxR family transcriptional regulator | insig. | 71 | 100 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04494 | | transcriptional regulator, LuxR family | no data | 71 | 100 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS05240 | | PAS and helix-turn-helix domain-containing protein | insig. | 68 | 100 |
| o | Acidovorax sp. GW101-3H11 | Ac3H11_133 | | Transcriptional regulator, LuxR family | sig. | 63 | 97 |
| o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF5198 | | Response regulator | insig. | 63 | 97 |
| o | Variovorax sp. SCN45 | GFF7370 | | PAS domain with LuxR-type DNA-binding domain | insig. | 56 | 99 |
| o | Variovorax sp. OAS795 | ABID97_RS19445 | | LuxR C-terminal-related transcriptional regulator | no data | 55 | 99 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS23195 | | LuxR family transcriptional regulator | sig. | 56 | 98 |
| | Variovorax sp. SCN45 | GFF1605 | | no description | insig. | 50 | 98 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF5261 | | Transcriptional regulator, LuxR family | insig. | 47 | 94 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS34345 | | PAS and helix-turn-helix domain-containing protein | no data | 47 | 85 |
| o | Phaeobacter inhibens DSM 17395 | PGA1_c12620 | | putative transcriptional regulator, araC family | insig. | 42 | 94 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c23630 | | putative transcriptional regulator | insig. | 41 | 94 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_05790 | | LuxR family transcriptional regulator | insig. | 35 | 94 |
| o | Pseudomonas sp. SVBP6 | COO64_RS25290 | | LuxR C-terminal-related transcriptional regulator | insig. | 38 | 94 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_446 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | strong | 30 | 65 |
| | Dechlorosoma suillum PS | Dsui_2382 | | PAS domain S-box | cofit | 28 | 71 |
| | Dechlorosoma suillum PS | Dsui_1429 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | cofit | 26 | 85 |
| | Dechlorosoma suillum PS | Dsui_2240 | | PAS domain S-box | cofit | 28 | 66 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_446 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | strong | 27 | 72 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_2715 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | insig. | 26 | 92 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS09315 | | PAS domain S-box protein | cofit | 27 | 64 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_1105 | | GGDEF domain protein | insig. | 25 | 62 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_4674 | | Nitrogen regulation protein NR(I) | no data | 44 | 34 |
| | Azospirillum brasilense Sp245 | AZOBR_RS24030 | | chemotaxis protein CheY | no data | 52 | 32 |
| | Shewanella sp. ANA-3 | Shewana3_3697 | | two component LuxR family transcriptional regulator (RefSeq) | insig. | 32 | 54 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS14750 | | PAS domain S-box protein | insig. | 27 | 71 |
| | Dechlorosoma suillum PS | Dsui_1581 | | response regulator | strong | 49 | 30 |
| | Shewanella oneidensis MR-1 | SO4157 | | DNA-binding response regulator (NCBI ptt file) | insig. | 32 | 54 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_00871 | | Transcriptional regulatory protein LiaR | insig. | 26 | 87 |
| | Escherichia coli ECRC100 | OKFHMN_19850 | ygeK | Uncharacterized response regulatory protein YgeK | no data | 26 | 87 |
| | Escherichia coli ECRC101 | MCAODC_10375 | ygeK | Uncharacterized response regulatory protein YgeK | insig. | 26 | 87 |
| | Escherichia coli ECRC102 | NIAGMN_17620 | ygeK | Uncharacterized response regulatory protein YgeK | no data | 26 | 87 |
| | Escherichia coli ECRC99 | KEDOAH_08280 | ygeK | Uncharacterized response regulatory protein YgeK | no data | 26 | 87 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_21605 | | two-component system response regulator BfiR | insig. | 50 | 29 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS13990 | | response regulator | insig. | 44 | 34 |
| | Serratia liquefaciens MT49 | IAI46_00435 | | transcriptional regulator UhpA | insig. | 36 | 41 |
| | Variovorax sp. OAS795 | ABID97_RS01990 | | response regulator | no data | 38 | 43 |
| | Variovorax sp. SCN45 | GFF5447 | | Two-component transcriptional response regulator, LuxR family | no data | 37 | 43 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_22405 | | DNA-binding response regulator | insig. | 36 | 48 |
| | Rhodopseudomonas palustris CGA009 | TX73_008645 | | response regulator | cofit | 43 | 32 |
| | Escherichia coli ECRC98 | JDDGAC_23495 | ygeK | Uncharacterized response regulatory protein YgeK | insig. | 35 | 38 |
| | Escherichia coli ECOR27 | NOLOHH_11735 | ygeK | Uncharacterized response regulatory protein YgeK | no data | 35 | 38 |
| | Pseudomonas stutzeri RCH2 | Psest_3659 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 36 | 48 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_1126 | | Response regulator | insig. | 49 | 26 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS13745 | | response regulator | no data | 45 | 32 |
| | Pseudomonas sp. S08-1 | OH686_15085 | | DNA-binding response regulator, LuxR family, near polyamine transporter | insig. | 36 | 48 |
| | Shewanella loihica PV-4 | Shew_3240 | | two component LuxR family transcriptional regulator (RefSeq) | insig. | 41 | 38 |
| | Variovorax sp. SCN45 | GFF1320 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | insig. | 23 | 62 |
| | Sphingobium sp. HT1-2 | GFF3048 | | Two-component nitrogen fixation transcriptional regulator FixJ | cofit | 53 | 26 |
| | Klebsiella michiganensis M5al | BWI76_RS14640 | | DNA-binding response regulator | no data | 34 | 54 |
| | Azospirillum sp. SherDot2 | MPMX19_03016 | | Response regulator protein TmoT | no data | 53 | 29 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS15535 | | response regulator | no data | 47 | 29 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_3952 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 40 | 31 |
| | Variovorax sp. SCN45 | GFF192 | | Nitrogen regulation protein NR(I), GlnG (=NtrC) | no data | 40 | 33 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1673 | | Nitrogen regulation protein NR(I) | insig. | 42 | 30 |
| | Escherichia coli BL21 | ECD_03553 | | response regulator in two-component regulatory system wtih UhpB | insig. | 40 | 31 |
| | Escherichia fergusonii Becca | EFB2_00029 | | Transcriptional regulatory protein UhpA | insig. | 40 | 31 |
| | Escherichia coli ECOR27 | NOLOHH_07335 | uhpA_G97D | DNA-binding response regulator UhpA | insig. | 40 | 31 |
| | Escherichia coli ECOR38 | HEPCGN_13905 | uhpA_G97D | DNA-binding response regulator UhpA | insig. | 40 | 31 |
| | Escherichia coli ECRC100 | OKFHMN_15180 | uhpA_G97D | DNA-binding response regulator UhpA | insig. | 40 | 31 |
| | Escherichia coli ECRC101 | MCAODC_05690 | uhpA_G97D | DNA-binding response regulator UhpA | insig. | 40 | 31 |
| | Escherichia coli ECRC102 | NIAGMN_12940 | uhpA_G97D | DNA-binding response regulator UhpA | insig. | 40 | 31 |
| | Escherichia coli ECRC62 | BNILDI_04190 | uhpA_G97D | DNA-binding response regulator UhpA | insig. | 40 | 31 |
| | Escherichia coli ECRC98 | JDDGAC_18805 | uhpA_G97D | DNA-binding response regulator UhpA | insig. | 40 | 31 |
| | Escherichia coli ECRC99 | KEDOAH_12965 | uhpA_G97D | DNA-binding response regulator UhpA | no data | 40 | 31 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_00031 | | Transcriptional regulatory protein UhpA | insig. | 40 | 31 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS21160 | | transcriptional regulator UhpA | insig. | 40 | 31 |
| | Escherichia coli BW25113 | b3669 | uhpA | DNA-binding response regulator in two-component regulatory system wtih UhpB (NCBI) | sig. | 40 | 31 |
| | Klebsiella michiganensis M5al | BWI76_RS27800 | | DNA-binding response regulator | sig. | 39 | 31 |
| | Dickeya dadantii 3937 | DDA3937_RS02865 | | transcriptional regulator UhpA | strong | 40 | 31 |
| | Dickeya dianthicola 67-19 | HGI48_RS02840 | | transcriptional regulator UhpA | insig. | 40 | 31 |
| | Dickeya dianthicola ME23 | DZA65_RS03015 | | transcriptional regulator UhpA | insig. | 40 | 31 |
| | Ralstonia solanacearum GMI1000 | RS_RS11600 | | DNA-binding response regulator | insig. | 42 | 29 |
| | Enterobacter sp. TBS_079 | MPMX20_00033 | | Transcriptional regulatory protein UhpA | sig. | 40 | 31 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF304 | | Transcriptional regulatory protein UhpA | insig. | 39 | 31 |
| | Klebsiella michiganensis M5al | BWI76_RS06060 | | DNA-binding response regulator | sig. | 38 | 36 |
| | Azospirillum sp. SherDot2 | MPMX19_03583 | | Response regulator protein TodT | no data | 37 | 42 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS08630 | | transcriptional regulator UhpA | insig. | 40 | 31 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_08505 | | transcriptional regulator UhpA | insig. | 39 | 31 |
| | Marinobacter adhaerens HP15 | HP15_1037 | | two-component response regulator | sig. | 49 | 26 |
| | Pseudomonas sp. SVBP6 | COO64_RS17310 | | response regulator transcription factor | insig. | 48 | 25 |
| | Serratia liquefaciens MT49 | IAI46_04860 | | response regulator transcription factor | sig. | 47 | 30 |
| | Sphingobium sp. HT1-2 | GFF1112 | | Two-component transcriptional response regulator, LuxR family | cofit | 42 | 33 |
| | Pseudomonas putida KT2440 | PP_3551 | | DNA-binding response regulator, LuxR family | strong | 44 | 29 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS30895 | | response regulator transcription factor | insig. | 40 | 29 |
| | Variovorax sp. OAS795 | ABID97_RS16350 | | response regulator | no data | 38 | 33 |
| | Xanthobacter sp. DMC5 | GFF670 | | Response regulator protein TmoT | no data | 33 | 43 |
| | Pseudomonas sp. BP01 | JOY50_RS28135 | | response regulator transcription factor | insig. | 42 | 29 |
| | Escherichia coli ECRC100 | OKFHMN_08705 | citB | DNA-binding response regulator | insig. | 38 | 32 |
| | Escherichia coli ECRC101 | MCAODC_27935 | citB | DNA-binding response regulator | insig. | 38 | 32 |
| | Escherichia coli ECRC102 | NIAGMN_06760 | citB | DNA-binding response regulator | insig. | 38 | 32 |
| | Escherichia coli ECRC98 | JDDGAC_12360 | citB | DNA-binding response regulator | insig. | 38 | 32 |