Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Cupriavidus basilensis FW507-4G11 | RR42_RS00430 | | histidine kinase | sig. | 100 | 100 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS10280 | | response regulator transcription factor | insig. | 42 | 100 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS14550 | | DNA-binding response regulator | cofit | 42 | 100 |
| Ralstonia solanacearum UW163 | UW163_RS12015 | | DNA-binding response regulator | insig. | 42 | 100 |
| Ralstonia solanacearum GMI1000 | RS_RS05330 | | DNA-binding response regulator | insig. | 41 | 100 |
| Ralstonia solanacearum PSI07 | RPSI07_RS18910 | | DNA-binding response regulator | insig. | 41 | 100 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS22005 | | transcriptional regulator | insig. | 39 | 98 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS29935 | | response regulator transcription factor | insig. | 39 | 100 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS00435 | | transcriptional regulator | insig. | 41 | 98 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS07870 | | response regulator transcription factor | insig. | 40 | 98 |
| Variovorax sp. SCN45 | GFF4909 | | Two-component transcriptional response regulator, OmpR family | insig. | 40 | 100 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS41900 | | response regulator transcription factor | insig. | 39 | 100 |
| Paraburkholderia graminis OAS925 | ABIE53_004242 | | two-component system OmpR family response regulator | insig. | 39 | 99 |
| Variovorax sp. OAS795 | ABID97_RS27135 | | response regulator transcription factor | insig. | 39 | 98 |
| Ralstonia solanacearum PSI07 | RPSI07_RS21305 | | DNA-binding response regulator | insig. | 39 | 98 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS11895 | | DNA-binding response regulator | insig. | 39 | 98 |
| Ralstonia solanacearum UW163 | UW163_RS01695 | | DNA-binding response regulator | insig. | 39 | 98 |
| Ralstonia solanacearum GMI1000 | RS_RS02715 | | DNA-binding response regulator | insig. | 40 | 98 |
| Paraburkholderia graminis OAS925 | ABIE53_006190 | | DNA-binding response OmpR family regulator | sig. | 36 | 99 |
| Acidovorax sp. GW101-3H11 | Ac3H11_4648 | | DNA-binding response regulator | insig. | 38 | 98 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_06535 | | two component transcriptional regulator, winged helix family | insig. | 36 | 99 |
| Burkholderia phytofirmans PsJN | BPHYT_RS24795 | | XRE family transcriptional regulator | insig. | 35 | 100 |
| Variovorax sp. OAS795 | ABID97_RS04425 | | response regulator transcription factor | insig. | 37 | 99 |
| Acidovorax sp. GW101-3H11 | Ac3H11_1761 | | DNA-binding response regulator | insig. | 37 | 100 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS08680 | | response regulator transcription factor | insig. | 39 | 100 |
| Marinobacter adhaerens HP15 | HP15_1185 | | two component transcriptional regulator, winged helix family | insig. | 35 | 99 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS20255 | | response regulator transcription factor | insig. | 35 | 97 |
| Paraburkholderia graminis OAS925 | ABIE53_004087 | | two-component system phosphate regulon response regulator PhoB | sig. | 34 | 97 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03209 | | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain | insig. | 34 | 97 |
| Burkholderia phytofirmans PsJN | BPHYT_RS22630 | | transcriptional regulator | insig. | 35 | 97 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF5520 | | DNA-binding response regulator | insig. | 35 | 98 |
| Caulobacter crescentus NA1000 | CCNA_03434 | | two-component response regulator | insig. | 32 | 98 |
| Caulobacter crescentus NA1000 Δfur | CCNA_03434 | | two-component response regulator | cofit | 32 | 98 |
| Ralstonia solanacearum GMI1000 | RS_RS09555 | | DNA-binding response regulator | insig. | 31 | 100 |
| Ralstonia solanacearum PSI07 | RPSI07_RS14970 | | DNA-binding response regulator | insig. | 31 | 100 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_10565 | | transcriptional regulator | insig. | 32 | 99 |
| Pseudomonas sp. RS175 | PFR28_04596 | | hypothetical protein | sig. | 32 | 99 |
| Pseudomonas sp. DMC3 | GFF580 | | Transcriptional regulatory protein CseB | insig. | 33 | 99 |
| Pseudomonas fluorescens SBW25 | PFLU_RS00025 | | response regulator transcription factor | insig. | 32 | 99 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS00025 | | response regulator transcription factor | insig. | 32 | 99 |
| Pseudomonas simiae WCS417 | PS417_00025 | | transcriptional regulator | cofit | 32 | 99 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS16615 | | response regulator transcription factor | insig. | 33 | 97 |
| Pseudomonas lactucae CFBP13502 | GEMAOFIL_00213 | | Transcriptional regulatory protein CseB | cofit | 33 | 99 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1925 | | Two-component response regulator | insig. | 32 | 99 |
| Pseudomonas aeruginosa PA14 | IKLFDK_20790 | | DNA-binding response regulator | insig. | 32 | 99 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_11620 | | transcriptional regulator | strong | 33 | 99 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4194 | | Two-component response regulator | cofit | 32 | 99 |
| Ralstonia solanacearum PSI07 | RPSI07_RS03595 | | DNA-binding response regulator | insig. | 32 | 100 |
| Ralstonia solanacearum GMI1000 | RS_RS21205 | | DNA-binding response regulator | cofit | 33 | 99 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS10300 | | response regulator transcription factor | insig. | 32 | 98 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS14565 | | DNA-binding response regulator | insig. | 30 | 98 |
| Ralstonia solanacearum UW163 | UW163_RS12030 | | DNA-binding response regulator | insig. | 30 | 98 |
| Ralstonia solanacearum GMI1000 | RS_RS05345 | | DNA-binding response regulator | insig. | 30 | 98 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS19615 | | DNA-binding response regulator | strong | 32 | 99 |
| Ralstonia solanacearum UW163 | UW163_RS19560 | | DNA-binding response regulator | insig. | 32 | 99 |
| Pseudomonas syringae pv. syringae B728a | Psyr_1497 | | Heavy metal response regulator | insig. | 34 | 89 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1497 | | Heavy metal response regulator | insig. | 34 | 89 |
| Ralstonia solanacearum PSI07 | RPSI07_RS18895 | | DNA-binding response regulator | insig. | 30 | 98 |
| Paraburkholderia graminis OAS925 | ABIE53_003661 | | two-component system OmpR family response regulator | insig. | 34 | 98 |
| Pseudomonas sp. DMC3 | GFF3411 | | Transcriptional activator protein CopR | cofit | 35 | 89 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS27660 | | response regulator transcription factor | insig. | 32 | 99 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS29170 | | hypothetical protein | insig. | 33 | 98 |
| Variovorax sp. SCN45 | GFF4686 | | Copper-sensing two-component system response regulator CusR | insig. | 35 | 89 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS04145 | | hisitidine kinase | insig. | 28 | 90 |
| Burkholderia phytofirmans PsJN | BPHYT_RS17505 | | transcriptional regulator | insig. | 35 | 99 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05694 | | two component transcriptional regulator, winged helix family | insig. | 33 | 98 |
| Rhodospirillum rubrum S1H | Rru_A2913 | | Two component Transcriptional regulator, Winged helix family (NCBI) | insig. | 35 | 89 |
| Magnetospirillum magneticum AMB-1 | AMB_RS06935 | | phosphate regulon transcriptional regulatory protein PhoB | insig. | 30 | 97 |
| Pseudomonas sp. BP01 | JOY50_RS08590 | | heavy metal response regulator transcription factor | insig. | 31 | 89 |
| Rhodopseudomonas palustris CGA009 | TX73_024820 | | phosphate regulon transcriptional regulator PhoB | insig. | 31 | 99 |
| Paraburkholderia graminis OAS925 | ABIE53_006052 | | DNA-binding response OmpR family regulator | insig. | 31 | 99 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS22300 | | chemotaxis protein CheY | insig. | 29 | 97 |
| Lysobacter sp. OAE881 | ABIE51_RS04165 | | response regulator transcription factor | insig. | 31 | 89 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS05370 | | response regulator transcription factor | insig. | 31 | 88 |
| Enterobacter asburiae PDN3 | EX28DRAFT_2093 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | insig. | 26 | 97 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1757 | | response regulator in two-component regulatory system with PhoQ | cofit | 32 | 88 |
| Marinobacter adhaerens HP15 | HP15_3947 | | two-component response regulator | insig. | 28 | 97 |
| Pseudomonas sp. BP01 | JOY50_RS20025 | | response regulator transcription factor | insig. | 36 | 86 |
| Pseudomonas putida KT2440 | PP_5383 | | transcriptional activator protein | insig. | 31 | 89 |
| Rhizobium sp. OAE497 | ABIE40_RS02310 | | phosphate regulon transcriptional regulator PhoB | insig. | 31 | 88 |
| Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS08970 | | phosphate regulon transcriptional regulator PhoB | no data | 30 | 97 |
| Caulobacter crescentus NA1000 | CCNA_02845 | | two-component response regulator | strong | 29 | 98 |
| Caulobacter crescentus NA1000 Δfur | CCNA_02845 | | two-component response regulator | cofit | 29 | 98 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_23125 | | transcriptional regulator | sig. | 35 | 64 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_26815 | | transcriptional regulator | insig. | 35 | 60 |
| Enterobacter sp. TBS_079 | MPMX20_01501 | | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP | insig. | 25 | 97 |
| Sinorhizobium meliloti 1021 | SMc02140 | | phosphate regulon transcriptional regulatory protein | strong | 30 | 88 |
| Pseudomonas aeruginosa PA14 | IKLFDK_04175 | | DNA-binding response regulator | insig. | 31 | 96 |
| Agrobacterium fabrum C58 | Atu0425 | | two component response regulator | no data | 30 | 88 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1120 | | DNA-binding heavy metal response regulator | insig. | 33 | 89 |
| Pseudomonas sp. RS175 | PFR28_02431 | | Regulator of RpoS | insig. | 33 | 90 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_504 | | DNA-binding response regulator | sig. | 30 | 90 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05017 | | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain | insig. | 26 | 100 |
| Pseudomonas stutzeri RCH2 | Psest_1598 | | heavy metal response regulator | insig. | 31 | 91 |
| Dechlorosoma suillum PS | Dsui_2644 | | heavy metal response regulator | cofit | 31 | 91 |
| Parabacteroides merdae CL09T00C40 | HMPREF1078_RS01665 | | response regulator transcription factor | insig. | 28 | 88 |
| Variovorax sp. SCN45 | GFF1238 | | Two-component transcriptional response regulator, OmpR family | insig. | 28 | 97 |
| Marinobacter adhaerens HP15 | HP15_3484 | | DNA-binding response regulator | no data | 28 | 90 |
| Klebsiella pneumoniae MKP103 | KDGMDA_17735 | | DNA-binding response regulator | insig. | 26 | 99 |
| Escherichia coli ECOR27 | NOLOHH_10660 | | Transcriptional regulatory protein QseB | insig. | 32 | 89 |