Homologs of Psyr_3403 from Pseudomonas syringae pv. syringae B728a

conserved hypothetical protein
SEED: LSU rRNA 2'-O-methyl-C2498 methyltransferase RlmM
KEGG: ribosomal RNA large subunit methyltransferase M

67 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas syringae pv. syringae B728a Psyr_3403 conserved hypothetical protein insig. 100 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3403 conserved hypothetical protein sig. 100 100
o Pseudomonas fluorescens FW300-N2C3 AO356_02380 23S rRNA methyltransferase insig. 89 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2300 LSU rRNA 2'-O-methyl-C2498 methyltransferase RlmM insig. 88 99
o Pseudomonas fluorescens SBW25 PFLU_RS07600 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM insig. 86 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS07600 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM insig. 86 100
o Pseudomonas simiae WCS417 PS417_07520 23S rRNA methyltransferase no data 86 99
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01636 Ribosomal RNA large subunit methyltransferase M cofit 86 99
o Pseudomonas sp. RS175 PFR28_01100 Ribosomal RNA large subunit methyltransferase M insig. 86 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3890 LSU rRNA 2'-O-methyl-C2498 methyltransferase RlmM no data 86 99
o Pseudomonas sp. SVBP6 COO64_RS05200 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM insig. 85 98
o Pseudomonas fluorescens FW300-N2E3 AO353_00560 23S rRNA methyltransferase sig. 87 99
o Pseudomonas sp. DMC3 GFF1261 Ribosomal RNA large subunit methyltransferase M cofit 85 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4051 LSU rRNA 2'-O-methyl-C2498 methyltransferase RlmM insig. 86 99
o Pseudomonas putida KT2440 PP_2113 Ribosomal RNA large subunit methyltransferase M insig. 81 98
o Pseudomonas sp. BP01 JOY50_RS22010 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM insig. 81 98
o Pseudomonas segetis P6 MPMX49_02323 Ribosomal RNA large subunit methyltransferase M insig. 83 98
o Pseudomonas sp. S08-1 OH686_02095 23S rRNA (cytidine(2498)-2'-O)-methyltransferase insig. 80 98
o Pseudomonas stutzeri RCH2 Psest_2520 Predicted SAM-dependent methyltransferase insig. 79 98
o Pseudomonas aeruginosa PA14 IKLFDK_07475 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM insig. 74 98
o Klebsiella michiganensis M5al BWI76_RS22945 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM insig. 51 100
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS16935 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM cofit 50 100
o Klebsiella pneumoniae MKP103 KDGMDA_03505 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM insig. 51 100
o Enterobacter asburiae PDN3 EX28DRAFT_2881 Predicted SAM-dependent methyltransferase insig. 50 100
o Pantoea sp. MT58 IAI47_04035 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM insig. 50 100
o Enterobacter sp. TBS_079 MPMX20_03669 Ribosomal RNA large subunit methyltransferase M insig. 50 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4863 'LSU rRNA 2'-O-methyl-C2498 methyltransferase RlmM' transl_table=11 insig. 49 100
o Rahnella sp. WP5 EX31_RS13100 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM insig. 49 100
o Escherichia coli BL21 ECD_02657 23S rRNA C2498 2'-O-ribose methyltransferase, SAM-dependent cofit 49 100
o Escherichia coli ECOR27 NOLOHH_12010 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM insig. 49 100
o Escherichia coli ECOR38 HEPCGN_19385 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM insig. 49 100
o Escherichia coli ECRC100 OKFHMN_20130 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM insig. 49 100
o Escherichia coli ECRC101 MCAODC_10655 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM insig. 49 100
o Escherichia coli ECRC102 NIAGMN_17900 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM insig. 49 100
o Escherichia coli ECRC62 BNILDI_10515 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM insig. 49 100
o Escherichia coli ECRC98 JDDGAC_23795 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM insig. 49 100
o Escherichia coli ECRC99 KEDOAH_08000 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM no data 49 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00925 Ribosomal RNA large subunit methyltransferase M insig. 49 100
o Escherichia coli BW25113 b2806 ygdE predicted methyltransferase (NCBI) sig. 49 100
o Escherichia fergusonii Becca EFB2_01111 Ribosomal RNA large subunit methyltransferase M insig. 49 100
o Escherichia coli Nissle 1917 ECOLIN_RS15640 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM insig. 49 100
o Pectobacterium carotovorum WPP14 HER17_RS16405 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM cofit 49 100
o Serratia liquefaciens MT49 IAI46_20330 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM insig. 49 100
o Shewanella sp. ANA-3 Shewana3_2891 putative RNA 2'-O-ribose methyltransferase (RefSeq) strong 47 97
o Shewanella oneidensis MR-1 SO1536 conserved hypothetical protein (NCBI ptt file) sig. 47 97
o Erwinia tracheiphila SCR3 LU632_RS06265 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM insig. 49 100
o Dickeya dianthicola ME23 DZA65_RS05400 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM insig. 48 98
o Erwinia amylovora T8 OLJFJH_09180 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM insig. 49 100
o Dickeya dadantii 3937 DDA3937_RS05060 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM cofit 48 98
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_17285 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM insig. 48 100
o Dickeya dianthicola 67-19 HGI48_RS05060 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM insig. 48 98
o Shewanella loihica PV-4 Shew_2761 putative RNA 2'-O-ribose methyltransferase (RefSeq) insig. 47 97
o Shewanella amazonensis SB2B Sama_2426 putative RNA 2'-O-ribose methyltransferase (RefSeq) sig. 48 97
o Marinobacter adhaerens HP15 HP15_2104 putative RNA 2'-O-ribose methyltransferase insig. 43 97
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4242.1 LSU rRNA 2'-O-methyl-C2498 methyltransferase RlmM insig. 45 96
o Lysobacter sp. OAE881 ABIE51_RS05440 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM insig. 42 96
o Kangiella aquimarina DSM 16071 B158DRAFT_2158 Predicted SAM-dependent methyltransferase insig. 40 96
o Alteromonas macleodii MIT1002 MIT1002_01523 Ribosomal RNA large subunit methyltransferase M insig. 39 97
  Magnetospirillum magneticum AMB-1 AMB_RS20710 hypothetical protein cofit 35 41
  Azospirillum sp. SherDot2 MPMX19_00847 Ribosomal RNA large subunit methyltransferase M insig. 31 46
  Azospirillum brasilense Sp245 AZOBR_RS09640 methyltransferase insig. 30 37
  Desulfovibrio vulgaris Miyazaki F DvMF_2347 hypothetical protein (RefSeq) insig. 33 44
  Desulfovibrio vulgaris Hildenborough JW710 DVU3073 conserved domain protein (TIGR) insig. 32 25
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS11460 SAM-dependent methyltransferase insig. 35 19
  Ralstonia solanacearum UW163 UW163_RS02125 SAM-dependent methyltransferase insig. 35 19
  Azospirillum sp. SherDot2 MPMX19_02327 Ribosomal RNA small subunit methyltransferase B insig. 41 19
  Dinoroseobacter shibae DFL-12 Dshi_3033 Fmu (Sun) domain protein (RefSeq) sig. 42 17