Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2986 | | Transcriptional regulator, LuxR family | strong | 100 | 100 |
o | Pseudomonas fluorescens FW300-N2C3 | AO356_05640 | | LuxR family transcriptional regulator | strong | 98 | 100 |
o | Pseudomonas sp. RS175 | PFR28_00478 | | Transcriptional regulatory protein DegU | strong | 97 | 100 |
o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4662 | | Transcriptional regulator, LuxR family | insig. | 92 | 99 |
o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3150 | | Transcriptional regulator, LuxR family | no data | 93 | 99 |
o | Pseudomonas fluorescens FW300-N2E3 | AO353_16835 | | LuxR family transcriptional regulator | sig. | 92 | 99 |
o | Pseudomonas fluorescens SBW25 | PFLU_RS05910 | | response regulator transcription factor | no data | 89 | 99 |
o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS05910 | | response regulator transcription factor | sig. | 89 | 99 |
o | Pseudomonas simiae WCS417 | PS417_05840 | | LuxR family transcriptional regulator | strong | 88 | 99 |
o | Pseudomonas putida KT2440 | PP_1635 | | DNA-binding response regulator | strong | 88 | 99 |
o | Pseudomonas sp. S08-1 | OH686_18240 | | Two-component transcriptional response regulator, LuxR family | cofit | 85 | 100 |
o | Pseudomonas syringae pv. syringae B728a | Psyr_1384 | | regulatory protein, LuxR:Response regulator receiver | no data | 85 | 98 |
o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1384 | | regulatory protein, LuxR:Response regulator receiver | no data | 85 | 98 |
o | Pseudomonas stutzeri RCH2 | Psest_2864 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | strong | 81 | 98 |
o | Marinobacter adhaerens HP15 | HP15_812 | | two component transcriptional regulator, LuxR family | no data | 60 | 97 |
o | Shewanella amazonensis SB2B | Sama_2076 | | response regulator receiver protein (RefSeq) | strong | 56 | 95 |
o | Acinetobacter radioresistens SK82 | MPMX26_02902 | | Transcriptional activator protein ExaE | strong | 56 | 94 |
o | Vibrio cholerae E7946 ATCC 55056 | CSW01_13640 | | DNA-binding response regulator | insig. | 52 | 96 |
o | Shewanella loihica PV-4 | Shew_1545 | | two component LuxR family transcriptional regulator (RefSeq) | no data | 53 | 95 |
o | Shewanella sp. ANA-3 | Shewana3_1732 | | two component LuxR family transcriptional regulator (RefSeq) | strong | 51 | 95 |
o | Bosea sp. OAE506 | ABIE41_RS24085 | | response regulator transcription factor | no data | 53 | 94 |
o | Shewanella oneidensis MR-1 | SO2648 | | DNA-binding response regulator, LuxR family (NCBI ptt file) | strong | 51 | 95 |
o | Rhodanobacter denitrificans MT42 | LRK55_RS08190 | | response regulator transcription factor | cofit | 54 | 98 |
o | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS08425 | | response regulator transcription factor | strong | 54 | 98 |
o | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS15195 | | response regulator transcription factor | strong | 53 | 98 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.5158.1 | | Transcriptional regulator, LuxR family | strong | 54 | 94 |
o | Rhizobium sp. OAE497 | ABIE40_RS02405 | | response regulator transcription factor | insig. | 49 | 97 |
o | Rhodanobacter sp. FW510-T8 | OKGIIK_15195 | | LuxR family transcriptional regulator | insig. | 54 | 95 |
o | Rhodopseudomonas palustris CGA009 | TX73_004390 | | response regulator transcription factor | strong | 53 | 94 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.1030.1 | | Transcriptional regulator, LuxR family | no data | 49 | 97 |
o | Agrobacterium fabrum C58 | Atu0484 | | two component response regulator | strong | 50 | 98 |
o | Lysobacter sp. OAE881 | ABIE51_RS08520 | | response regulator transcription factor | insig. | 48 | 97 |
| Lysobacter sp. OAE881 | ABIE51_RS01665 | | response regulator transcription factor | no data | 55 | 94 |
o | Acidovorax sp. GW101-3H11 | Ac3H11_716 | | Transcriptional regulator, LuxR family | no data | 49 | 96 |
o | Sinorhizobium meliloti 1021 | SMc02248 | | transcriptional regulator | cofit | 46 | 99 |
o | Azospirillum sp. SherDot2 | MPMX19_06084 | | Transcriptional regulatory protein LnrK | insig. | 48 | 96 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS08535 | | response regulator transcription factor | insig. | 48 | 95 |
| Rhodanobacter sp. FW510-T8 | OKGIIK_06500 | citB | DNA-binding response regulator | no data | 48 | 97 |
| Shewanella amazonensis SB2B | Sama_0522 | | response regulator receiver protein (RefSeq) | insig. | 46 | 97 |
| Shewanella sp. ANA-3 | Shewana3_3459 | | two component LuxR family transcriptional regulator (RefSeq) | cofit | 46 | 97 |
| Azospirillum sp. SherDot2 | MPMX19_05507 | | Transcriptional regulatory protein DegU | insig. | 46 | 94 |
| Rhodanobacter denitrificans MT42 | LRK55_RS00525 | | response regulator transcription factor | cofit | 49 | 97 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS00750 | | response regulator transcription factor | insig. | 49 | 97 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS08575 | | response regulator transcription factor | no data | 51 | 91 |
| Shewanella loihica PV-4 | Shew_2614 | | two component LuxR family transcriptional regulator (RefSeq) | insig. | 49 | 95 |
o | Alteromonas macleodii MIT1002 | MIT1002_03515 | | Protease production enhancer protein | strong | 48 | 95 |
| Azospirillum sp. SherDot2 | MPMX19_05115 | | Transcriptional regulatory protein DegU | insig. | 45 | 94 |
| Alteromonas macleodii MIT1002 | MIT1002_02224 | | Protease production enhancer protein | cofit | 44 | 95 |
o | Azospirillum brasilense Sp245 | AZOBR_RS12735 | | transcriptional regulator | cofit | 46 | 95 |
| Alteromonas macleodii MIT1002 | MIT1002_01453 | | Protease production enhancer protein | insig. | 44 | 98 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_22350 | | LuxR family transcriptional regulator | sig. | 46 | 93 |
o | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS15200 | | response regulator transcription factor | no data | 48 | 95 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1399 | | Transcriptional regulator, LuxR family | strong | 44 | 94 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_3528 | | Transcriptional regulator, LuxR family | sig. | 42 | 93 |
| Pseudomonas putida KT2440 | PP_2665 | | Glycerol metabolism activator | strong | 45 | 93 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_28105 | | LuxR family transcriptional regulator | strong | 43 | 93 |
| Alteromonas macleodii MIT1002 | MIT1002_03317 | | Transcriptional regulatory protein DevR (DosR) | strong | 39 | 92 |
| Pseudomonas simiae WCS417 | PS417_17505 | | LuxR family transcriptional regulator | strong | 44 | 93 |
| Pseudomonas sp. RS175 | PFR28_01803 | | Transcriptional regulatory protein DegU | sig. | 43 | 93 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4489 | | Transcriptional regulator, LuxR family | insig. | 42 | 93 |
| Pseudomonas stutzeri RCH2 | Psest_2038 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | strong | 44 | 93 |
| Marinobacter adhaerens HP15 | HP15_3183 | | two component transcriptional regulator, LuxR family | strong | 42 | 93 |
| Shewanella oneidensis MR-1 | SO3305 | | DNA-binding response regulator, LuxR family (NCBI ptt file) | insig. | 40 | 96 |
| Sinorhizobium meliloti 1021 | SM_b20162 | | transcriptional regulator | insig. | 37 | 94 |
o | Phaeobacter inhibens DSM 17395 | PGA1_c22610 | | putative transcriptional regulator, containing response regulator domain | insig. | 41 | 94 |
| Azospirillum brasilense Sp245 | AZOBR_RS20235 | | transcriptional regulator | strong | 41 | 96 |
| Azospirillum sp. SherDot2 | MPMX19_01612 | | Transcriptional regulatory protein DegU | insig. | 39 | 95 |
| Azospirillum brasilense Sp245 | AZOBR_RS12455 | | transcriptional regulator | sig. | 39 | 93 |
o | Dinoroseobacter shibae DFL-12 | Dshi_2674 | | two component transcriptional regulator, LuxR family (RefSeq) | insig. | 40 | 94 |
| Azospirillum sp. SherDot2 | MPMX19_04898 | | Transcriptional regulatory protein LnrK | sig. | 40 | 96 |
| Magnetospirillum magneticum AMB-1 | AMB_RS19675 | | DNA-binding response regulator | cofit | 38 | 98 |
| Azospirillum sp. SherDot2 | MPMX19_01390 | | Transcriptional regulatory protein LnrK | insig. | 39 | 91 |
| Acidovorax sp. GW101-3H11 | Ac3H11_1470 | | two component transcriptional regulator, LuxR family | insig. | 39 | 98 |
| Azospirillum brasilense Sp245 | AZOBR_RS10290 | | transcriptional regulator | strong | 40 | 91 |
o | Variovorax sp. OAS795 | ABID97_RS05205 | | response regulator transcription factor | insig. | 38 | 95 |
| Dinoroseobacter shibae DFL-12 | Dshi_0465 | | two component transcriptional regulator, LuxR family (RefSeq) | insig. | 36 | 94 |
| Magnetospirillum magneticum AMB-1 | AMB_RS13915 | | DNA-binding response regulator | cofit | 37 | 95 |
| Rhodospirillum rubrum S1H | Rru_A3229 | | Two Component Transcriptional Regulator, LuxR family (NCBI) | insig. | 37 | 95 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1492 | | Nitrate/nitrite response regulator protein | no data | 34 | 95 |
| Sinorhizobium meliloti 1021 | SMa1550 | | Response regulator | insig. | 36 | 91 |
| Escherichia coli BL21 | ECD_02120 | | response regulator in two-component regulatory system with NarQ | insig. | 32 | 95 |
| Escherichia coli ECOR27 | NOLOHH_14895 | narP | nitrate/nitrite response regulator protein NarP | cofit | 32 | 95 |
| Escherichia coli ECOR38 | HEPCGN_22585 | narP | nitrate/nitrite response regulator protein NarP | cofit | 32 | 95 |
| Escherichia coli ECRC101 | OKFHMN_23320 | narP | nitrate/nitrite response regulator protein NarP | insig. | 32 | 95 |
| Escherichia coli ECRC101 | MCAODC_14370 | narP | nitrate/nitrite response regulator protein NarP | insig. | 32 | 95 |
| Escherichia coli ECRC102 | NIAGMN_21085 | narP | nitrate/nitrite response regulator protein NarP | insig. | 32 | 95 |
| Escherichia coli ECRC62 | BNILDI_13815 | narP | nitrate/nitrite response regulator protein NarP | insig. | 32 | 95 |
| Escherichia coli ECRC98 | JDDGAC_27280 | narP | nitrate/nitrite response regulator protein NarP | no data | 32 | 95 |
| Escherichia coli ECRC99 | KEDOAH_04865 | narP | nitrate/nitrite response regulator protein NarP | no data | 32 | 95 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01518 | | Nitrate/nitrite response regulator protein NarL | cofit | 32 | 95 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS19300 | | response regulator transcription factor | insig. | 36 | 92 |
| Escherichia coli BW25113 | b2193 | narP | DNA-binding response regulator in two-component regulatory system with NarQ or NarX (NCBI) | insig. | 32 | 95 |
o | Variovorax sp. SCN45 | GFF5912 | | Two-component transcriptional response regulator, LuxR family, but with unusual receiver domain | insig. | 37 | 95 |
| Escherichia fergusonii Becca | EFB2_01663 | | Nitrate/nitrite response regulator protein NarL | insig. | 33 | 95 |
| Escherichia coli Nissle 1917 | ECOLIN_RS12820 | | nitrate/nitrite response regulator protein NarP | no data | 33 | 95 |
| Dechlorosoma suillum PS | Dsui_0382 | | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 39 | 95 |
o | Herbaspirillum seropedicae SmR1 | HSERO_RS06185 | | response regulator protein | sig. | 34 | 91 |
| Magnetospirillum magneticum AMB-1 | AMB_RS11155 | | DNA-binding response regulator | cofit | 34 | 98 |
o | Serratia liquefaciens MT49 | IAI46_06400 | | response regulator transcription factor | insig. | 38 | 87 |
| Phaeobacter inhibens DSM 17395 | PGA1_c19640 | | transcriptional regulator, containing response regulator domain | insig. | 35 | 94 |