Homologs of PFR28_01780 from Pseudomonas sp. RS175

Octopine transport system permease protein OccM
SEED: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
KEGG: putative glutamine transport system permease protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas sp. RS175 PFR28_01780 Octopine transport system permease protein OccM strong 100 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_674 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) insig. 96 100
o Pseudomonas fluorescens FW300-N2C3 AO356_24925 ABC transporter permease insig. 96 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5972 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) insig. 90 100
o Pseudomonas sp. S08-1 OH686_13140 4-hydroxyproline ABC transporter, permease protein1 insig. 85 100
o Pseudomonas fluorescens FW300-N2E3 AO353_14895 ABC transporter permease insig. 70 100
o Sinorhizobium meliloti 1021 SM_b20264 amino acid ABC transporter permease insig. 62 100
o Agrobacterium fabrum C58 Atu4679 amino acid ABC transporter permease insig. 61 100
o Marinobacter adhaerens HP15 HP15_1420 putative amino acid ABC transporter permease protein sig. 46 99
  Sinorhizobium meliloti 1021 SMa0501 ABC transporter permease insig. 35 96
  Agrobacterium fabrum C58 Atu4537 amino acid ABC transporter permease strong 32 99
  Agrobacterium fabrum C58 Atu4688 amino acid ABC transporter permease strong 33 91
  Bosea sp. OAE506 ABIE41_RS09795 amino acid ABC transporter permease cofit 35 89
  Rhizobium sp. OAE497 ABIE40_RS21000 amino acid ABC transporter permease insig. 33 88
  Castellaniella sp019104865 MT123 ABCV34_RS08645 amino acid ABC transporter permease insig. 33 91
  Sinorhizobium meliloti 1021 SMa0079 ABC transporter permease insig. 31 99
  Cupriavidus basilensis FW507-4G11 RR42_RS04400 ABC transporter permease insig. 33 93
  Castellaniella sp019104865 MT123 ABCV34_RS07805 amino acid ABC transporter permease insig. 32 90
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5723 polar amino acid ABC transporter, inner membrane subunit insig. 32 90
  Paraburkholderia sabiae LMG 24235 QEN71_RS33840 amino acid ABC transporter permease insig. 30 98
  Paraburkholderia graminis OAS925 ABIE53_004871 polar amino acid transport system permease protein sig. 30 98
  Azospirillum brasilense Sp245 AZOBR_RS15675 ABC transporter permease insig. 29 91
  Herbaspirillum seropedicae SmR1 HSERO_RS19335 ABC transporter permease strong 31 91
  Pseudomonas stutzeri RCH2 Psest_0136 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family strong 31 89
  Variovorax sp. SCN45 GFF2912 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) insig. 30 99
  Pseudomonas simiae WCS417 PS417_01810 ABC transporter permease insig. 35 93
  Castellaniella sp019104865 MT123 ABCV34_RS12040 amino acid ABC transporter permease insig. 34 94
  Vibrio cholerae E7946 ATCC 55056 CSW01_00045 amino acid ABC transporter permease insig. 32 95
  Castellaniella sp019104865 MT123 ABCV34_RS03445 ABC transporter permease subunit insig. 33 90
  Pseudomonas putida KT2440 PP_5023 Amino acid ABC transporter, permease protein sig. 35 90
  Burkholderia phytofirmans PsJN BPHYT_RS08555 ABC transporter permease insig. 32 94
  Pseudomonas fluorescens SBW25 PFLU_RS01855 amino acid ABC transporter permease insig. 35 93
  Pseudomonas fluorescens SBW25-INTG PFLU_RS01855 amino acid ABC transporter permease sig. 35 93
  Cupriavidus basilensis FW507-4G11 RR42_RS09490 ABC transporter permease insig. 33 96
  Pseudomonas fluorescens FW300-N2E3 AO353_11670 amino acid ABC transporter permease insig. 32 99
  Pseudomonas sp. S08-1 OH686_14490 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) cofit 31 96
  Pseudomonas fluorescens GW456-L13 PfGW456L13_445 Cystine ABC transporter, permease protein insig. 32 99
  Desulfovibrio vulgaris Hildenborough JW710 DVU0967 amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) strong 34 90
  Pseudomonas fluorescens FW300-N2E3 AO353_12325 ABC transporter permease insig. 34 91
  Desulfovibrio vulgaris Miyazaki F DvMF_1568 polar amino acid ABC transporter, inner membrane subunit (RefSeq) sig. 31 90
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1694 Cystine ABC transporter, permease protein sig. 33 95
  Acidovorax sp. GW101-3H11 Ac3H11_2554 ABC transporter for L-Histidine, permease component 1 (from data) strong 31 98
  Variovorax sp. SCN45 GFF5397 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) insig. 30 93
  Pseudomonas fluorescens FW300-N2E3 AO353_08865 ABC transporter permease insig. 31 99
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1966 Arginine/ornithine ABC transporter, permease protein AotM strong 30 100
  Ralstonia solanacearum PSI07 RPSI07_RS02860 amino acid ABC transporter permease insig. 32 92
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05871 amino acid ABC transporter membrane protein 1, PAAT family (TC 3.A.1.3.-) insig. 29 98
  Rhizobium sp. OAE497 ABIE40_RS23915 ABC transporter permease subunit insig. 33 87
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00741 amino acid ABC transporter membrane protein, PAAT family insig. 32 94
  Pseudomonas fluorescens SBW25 PFLU_RS01210 cystine ABC transporter permease insig. 31 95
  Pseudomonas fluorescens SBW25-INTG PFLU_RS01210 cystine ABC transporter permease insig. 31 95
  Herbaspirillum seropedicae SmR1 HSERO_RS23035 ABC transporter permease insig. 31 91
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2212 amino acid ABC transporter, permease protein insig. 30 99
  Castellaniella sp019104865 MT123 ABCV34_RS12045 amino acid ABC transporter permease insig. 36 85
  Ralstonia solanacearum PSI07 RPSI07_RS07390 amino acid ABC transporter permease cofit 31 92
  Azospirillum brasilense Sp245 AZOBR_RS00675 ABC transporter permease strong 31 94
  Vibrio cholerae E7946 ATCC 55056 CSW01_19280 amino acid ABC transporter permease insig. 40 82
  Paraburkholderia sabiae LMG 24235 QEN71_RS40270 amino acid ABC transporter permease insig. 32 99
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1694 Cystine ABC transporter, permease protein insig. 30 95
  Dickeya dadantii 3937 DDA3937_RS08250 amino acid ABC transporter permease insig. 37 81
  Ralstonia solanacearum GMI1000 RS_RS21590 amino acid ABC transporter permease insig. 31 92
  Variovorax sp. SCN45 GFF2721 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) insig. 30 86
  Pantoea sp. MT58 IAI47_08180 cystine ABC transporter permease insig. 31 95
  Rhizobium sp. OAE497 ABIE40_RS20630 amino acid ABC transporter permease sig. 33 94
  Caulobacter crescentus NA1000 CCNA_01507 cystine transport system permease protein strong 36 87
  Caulobacter crescentus NA1000 Δfur CCNA_01507 cystine transport system permease protein cofit 36 87
  Variovorax sp. SCN45 GFF1280 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) insig. 36 86
  Rhizobium sp. OAE497 ABIE40_RS25690 ABC transporter permease insig. 34 87
  Enterobacter sp. TBS_079 MPMX20_02843 L-cystine transport system permease protein YecS insig. 29 95
  Variovorax sp. SCN45 GFF3048 Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4) insig. 33 90
  Paraburkholderia graminis OAS925 ABIE53_001952 cystine transport system permease protein insig. 32 94
  Azospirillum sp. SherDot2 MPMX19_02469 Octopine transport system permease protein OccM insig. 32 97
  Agrobacterium fabrum C58 Atu4689 amino acid ABC transporter permease strong 31 85
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1643 Amino acid ABC transporter, permease protein insig. 31 95
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4457 amino acid ABC transporter, permease protein insig. 30 91
  Pseudomonas syringae pv. syringae B728a Psyr_0297 amino acid ABC transporter membrane protein 1, PAAT family insig. 29 99
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0297 amino acid ABC transporter membrane protein 1, PAAT family insig. 29 99
  Azospirillum sp. SherDot2 MPMX19_05880 L-cystine transport system permease protein YecS insig. 29 91
  Azospirillum sp. SherDot2 MPMX19_03639 Octopine transport system permease protein OccM insig. 31 89
  Pseudomonas putida KT2440 PP_4484 histidine / lysine / arginine / ornithine ABC transporter - permease subunit strong 31 98
  Rahnella sp. WP5 EX31_RS21115 amino acid ABC transporter permease insig. 30 93
  Herbaspirillum seropedicae SmR1 HSERO_RS07525 ABC transporter permease insig. 30 90
  Herbaspirillum seropedicae SmR1 HSERO_RS01200 ABC transporter permease insig. 33 86
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05402 amino acid ABC transporter membrane protein 2, PAAT family insig. 33 90
  Pseudomonas sp. RS175 PFR28_04912 Octopine transport system permease protein OccM insig. 31 95
  Pseudomonas fluorescens FW300-N2E3 AO353_27980 amino acid ABC transporter permease insig. 30 96
  Escherichia coli ECRC101 OKFHMN_25800 tcyL cystine ABC transporter permease insig. 30 95
  Escherichia coli ECRC101 MCAODC_19590 tcyL cystine ABC transporter permease insig. 30 95
  Escherichia coli ECRC102 NIAGMN_02250 tcyL cystine ABC transporter permease insig. 30 95
  Escherichia coli ECRC98 JDDGAC_00390 tcyL cystine ABC transporter permease no data 30 95
  Escherichia coli ECRC99 KEDOAH_02290 tcyL cystine ABC transporter permease no data 30 95
  Pseudomonas fluorescens GW456-L13 PfGW456L13_878 amino acid ABC transporter, permease protein insig. 29 99
  Enterobacter asburiae PDN3 EX28DRAFT_0629 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family insig. 29 95
  Methanococcus maripaludis S2 MMP_RS02915 amino acid ABC transporter permease sig. 31 92
  Escherichia fergusonii Becca EFB2_02028 L-cystine transport system permease protein YecS insig. 30 95
  Escherichia coli ECOR27 NOLOHH_16420 tcyL cystine ABC transporter permease cofit 30 95
  Escherichia coli ECOR38 HEPCGN_04155 tcyL cystine ABC transporter permease cofit 30 95
  Escherichia coli ECRC62 BNILDI_15210 tcyL cystine ABC transporter permease insig. 30 95
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01811 L-cystine transport system permease protein YecS insig. 30 95
  Escherichia coli Nissle 1917 ECOLIN_RS10925 cystine ABC transporter permease no data 30 95