Homologs of PFLU_RS24635 from Pseudomonas fluorescens SBW25

L,D-transpeptidase family protein
SEED: Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)

63 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas fluorescens SBW25 PFLU_RS24635 L,D-transpeptidase family protein cofit 100 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS24635 L,D-transpeptidase family protein insig. 100 100
o Pseudomonas simiae WCS417 PS417_22975 hypothetical protein no data 96 100
o Pseudomonas fluorescens FW300-N2E3 AO353_04440 hypothetical protein insig. 83 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4828 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) insig. 81 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_885 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) sig. 82 100
o Pseudomonas sp. RS175 PFR28_03510 hypothetical protein insig. 82 100
o Pseudomonas fluorescens FW300-N2C3 AO356_17560 hypothetical protein insig. 80 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5435 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) strong 80 100
o Pseudomonas syringae pv. syringae B728a Psyr_1271 ErfK/YbiS/YcfS/YnhG sig. 64 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1271 ErfK/YbiS/YcfS/YnhG insig. 64 100
o Pseudomonas putida KT2440 PP_1451 conserved exported protein of unknown function strong 64 100
o Pseudomonas stutzeri RCH2 Psest_3142 Uncharacterized protein conserved in bacteria sig. 65 100
o Pseudomonas sp. S08-1 OH686_17665 L,D-transpeptidase cofit 65 100
o Shewanella oneidensis MR-1 SO2183 conserved hypothetical protein (NCBI ptt file) sig. 43 96
o Shewanella sp. ANA-3 Shewana3_2420 hypothetical protein (RefSeq) insig. 44 96
o Shewanella amazonensis SB2B Sama_2113 ErfK/YbiS/YcfS/YnhG (RefSeq) sig. 45 85
o Marinobacter adhaerens HP15 HP15_3828 ErfK/YbiS/YcfS/YnhG family protein insig. 43 96
  Shewanella loihica PV-4 Shew_1490 ErfK/YbiS/YcfS/YnhG family protein (RefSeq) insig. 46 91
o Dinoroseobacter shibae DFL-12 Dshi_3494 ErfK/YbiS/YcfS/YnhG family protein (RefSeq) insig. 42 85
o Phaeobacter inhibens DSM 17395 PGA1_c34790 Uncharacterized protein conserved in bacteria strong 40 98
  Shewanella sp. ANA-3 Shewana3_3390 hypothetical protein (RefSeq) insig. 41 87
o Vibrio cholerae E7946 ATCC 55056 CSW01_14820 hypothetical protein insig. 41 86
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS15445 hypothetical protein insig. 35 64
  Variovorax sp. OAS795 ABID97_RS24260 L,D-transpeptidase family protein insig. 32 89
  Variovorax sp. SCN45 GFF2215 L,D-transpeptidase insig. 35 65
  Acidovorax sp. GW101-3H11 Ac3H11_43 ErfK/YbiS/YcfS/YnhG family protein cofit 37 71
  Sinorhizobium meliloti 1021 SMc00689 lipoprotein strong 29 74
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5144 ErfK/YbiS/YcfS/YnhG family protein cofit 33 72
  Pantoea sp. MT58 IAI47_15180 murein L,D-transpeptidase insig. 31 75
  Klebsiella michiganensis M5al BWI76_RS05485 transpeptidase sig. 26 98
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1507 probable exported protein STY0357 insig. 29 75
  Dickeya dadantii 3937 DDA3937_RS16580 murein L,D-transpeptidase insig. 25 89
  Shewanella oneidensis MR-1 SO4656.3 conserved hypothetical protein (NCBI ptt file) insig. 37 35
  Serratia liquefaciens MT49 IAI46_04350 murein L,D-transpeptidase insig. 28 75
  Agrobacterium fabrum C58 Atu3631 hypothetical protein insig. 28 59
  Escherichia coli BL21 ECD_00219 L,D-transpeptidase-related protein insig. 29 98
  Escherichia fergusonii Becca EFB2_03793 hypothetical protein insig. 29 98
  Escherichia coli ECOR27 NOLOHH_02135 dpaA peptidoglycan meso-diaminopimelic acid protein amidase cofit 29 98
  Escherichia coli ECOR38 HEPCGN_07870 dpaA peptidoglycan meso-diaminopimelic acid protein amidase cofit 29 98
  Escherichia coli ECRC101 OKFHMN_09765 dpaA peptidoglycan meso-diaminopimelic acid protein amidase insig. 29 98
  Escherichia coli ECRC101 MCAODC_00285 dpaA peptidoglycan meso-diaminopimelic acid protein amidase insig. 29 98
  Escherichia coli ECRC102 NIAGMN_07625 dpaA peptidoglycan meso-diaminopimelic acid protein amidase insig. 29 98
  Escherichia coli ECRC62 BNILDI_00330 dpaA peptidoglycan meso-diaminopimelic acid protein amidase insig. 29 98
  Escherichia coli ECRC98 JDDGAC_13390 dpaA peptidoglycan meso-diaminopimelic acid protein amidase no data 29 98
  Escherichia coli ECRC99 KEDOAH_18390 dpaA peptidoglycan meso-diaminopimelic acid protein amidase no data 29 98
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03415 hypothetical protein insig. 29 98
  Escherichia coli Nissle 1917 ECOLIN_RS01760 peptidoglycan meso-diaminopimelic acid protein amidase cofit 29 98
  Escherichia coli BW25113 b0224 yafK hypothetical protein (NCBI) insig. 29 98
  Dickeya dianthicola 67-19 HGI48_RS16650 murein L,D-transpeptidase cofit 28 59
  Enterobacter sp. TBS_079 MPMX20_00913 hypothetical protein insig. 25 98
  Enterobacter asburiae PDN3 EX28DRAFT_2665 Uncharacterized protein conserved in bacteria cofit 25 98
  Rahnella sp. WP5 EX31_RS21010 murein L,D-transpeptidase insig. 31 57
  Pectobacterium carotovorum WPP14 HER17_RS04655 peptidoglycan meso-diaminopimelic acid protein amidase insig. 30 55
  Dickeya dianthicola ME23 DZA65_RS17740 murein L,D-transpeptidase insig. 28 59
  Bosea sp. OAE506 ABIE41_RS06010 murein L,D-transpeptidase family protein strong 27 66
  Erwinia tracheiphila SCR3 LU632_RS01145 dpaA peptidoglycan meso-diaminopimelic acid protein amidase insig. 29 64
  Rhodopseudomonas palustris CGA009 TX73_002640 hypothetical protein insig. 27 58
  Desulfovibrio vulgaris Hildenborough JW710 DVU2944 ErfK/YbiS/YcfS/YnhG family protein (TIGR) sig. 27 97
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4103 probable exported protein STY0357 cofit 27 75
  Rhizobium sp. OAE497 ABIE40_RS17695 murein L,D-transpeptidase family protein strong 27 59
  Herbaspirillum seropedicae SmR1 HSERO_RS09320 ErfK/YbiS/YcfS/YnhG family protein insig. 26 84
  Dechlorosoma suillum PS Dsui_3086 hypothetical protein insig. 33 59