| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Azospirillum sp. SherDot2 | MPMX19_00088 | | HTH-type transcriptional regulator HdfR | insig. | 100 | 100 |
| o | Azospirillum brasilense Sp245 | AZOBR_RS00870 | | LysR family transcriptional regulator | insig. | 78 | 92 |
| | Azospirillum sp. SherDot2 | MPMX19_05344 | | HTH-type transcriptional regulator YofA | insig. | 45 | 89 |
| o | Pseudomonas sp. S08-1 | OH686_22455 | | Transcriptional regulator, LysR family | insig. | 45 | 89 |
| o | Pseudomonas sp. SVBP6 | COO64_RS06030 | | LysR family transcriptional regulator | insig. | 45 | 89 |
| o | Pseudomonas sp. DMC3 | GFF4607 | | HTH-type transcriptional regulator HdfR | cofit | 43 | 87 |
| o | Pseudomonas syringae pv. syringae B728a | Psyr_3624 | | transcriptional regulator, LysR family | insig. | 44 | 89 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3624 | | transcriptional regulator, LysR family | insig. | 44 | 89 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_272 | | Transcriptional regulator, LysR family | insig. | 42 | 87 |
| o | Pseudomonas putida KT2440 | PP_1863 | | Transcriptional regulator, LysR family | insig. | 44 | 89 |
| o | Pseudomonas segetis P6 | MPMX49_01899 | | HTH-type transcriptional regulator CynR | strong | 42 | 89 |
| | Agrobacterium fabrum C58 | Atu0654 | | transcriptional regulator, LysR family | strong | 39 | 90 |
| | Azospirillum brasilense Sp245 | AZOBR_RS17225 | | LysR family transcriptional regulator | insig. | 44 | 83 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_14455 | | LysR family transcriptional regulator | insig. | 45 | 84 |
| o | Rhizobium sp. OAE497 | ABIE40_RS03500 | | LysR substrate-binding domain-containing protein | strong | 40 | 87 |
| o | Pseudomonas sp. BP01 | JOY50_RS17025 | | LysR substrate-binding domain-containing protein | insig. | 43 | 89 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_03135 | | LysR family transcriptional regulator | cofit | 42 | 89 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2456 | | Transcriptional regulator, LysR family | strong | 42 | 89 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2241 | | Transcriptional regulator, LysR family | insig. | 42 | 87 |
| o | Pseudomonas stutzeri RCH2 | Psest_1630 | | Transcriptional regulator | insig. | 44 | 84 |
| | Sinorhizobium meliloti 1021 | SMc00820 | | transcriptional regulator | sig. | 39 | 93 |
| o | Pseudomonas sp. RS175 | PFR28_00975 | | HTH-type transcriptional regulator HdfR | strong | 42 | 89 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_19100 | | LysR family transcriptional regulator | insig. | 42 | 89 |
| | Azospirillum sp. SherDot2 | MPMX19_00224 | | HTH-type transcriptional regulator GltC | insig. | 39 | 94 |
| o | Bosea sp. OAE506 | ABIE41_RS23080 | | LysR substrate-binding domain-containing protein | insig. | 44 | 86 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05286 | | transcriptional regulator, LysR family | insig. | 39 | 91 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS08460 | | LysR family transcriptional regulator | insig. | 42 | 89 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS08460 | | LysR family transcriptional regulator | insig. | 42 | 89 |
| o | Paraburkholderia graminis OAS925 | ABIE53_006542 | | DNA-binding transcriptional LysR family regulator | insig. | 39 | 91 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS23955 | | LysR family transcriptional regulator | insig. | 39 | 91 |
| o | Pseudomonas simiae WCS417 | PS417_08510 | | LysR family transcriptional regulator | sig. | 42 | 84 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01834 | | HTH-type transcriptional regulator HdfR | cofit | 41 | 89 |
| | Caulobacter crescentus NA1000 | CCNA_03625 | | transcriptional regulator CztR | sig. | 42 | 89 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_03625 | | transcriptional regulator CztR | cofit | 42 | 89 |
| o | Rhodopseudomonas palustris CGA009 | TX73_013870 | | LysR substrate-binding domain-containing protein | insig. | 39 | 93 |
| | Xanthobacter sp. DMC5 | GFF1272 | | HTH-type transcriptional regulator YofA | insig. | 42 | 90 |
| | Xanthobacter sp. DMC5 | GFF3932 | | HTH-type transcriptional regulator HdfR | no data | 40 | 92 |
| | Marinobacter adhaerens HP15 | HP15_2775 | | transcriptional regulator protein, LysR family | insig. | 36 | 90 |
| | Rhodopseudomonas palustris CGA009 | TX73_004170 | | LysR substrate-binding domain-containing protein | insig. | 38 | 87 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS07685 | | LysR family transcriptional regulator | insig. | 39 | 85 |
| | Rhizobium sp. OAE497 | ABIE40_RS05065 | | LysR family transcriptional regulator | insig. | 40 | 86 |
| | Bosea sp. OAE506 | ABIE41_RS06340 | | LysR family transcriptional regulator | insig. | 40 | 91 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS17670 | | LysR family transcriptional regulator | insig. | 40 | 89 |
| o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS16915 | | LysR family transcriptional regulator | insig. | 39 | 86 |
| o | Ralstonia solanacearum UW163 | UW163_RS18270 | | LysR family transcriptional regulator | insig. | 39 | 86 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS23475 | | LysR family transcriptional regulator | insig. | 39 | 89 |
| | Paraburkholderia graminis OAS925 | ABIE53_005534 | | DNA-binding transcriptional LysR family regulator | insig. | 38 | 89 |
| | Rhizobium sp. OAE497 | ABIE40_RS25435 | | LysR substrate-binding domain-containing protein | insig. | 35 | 89 |
| | Azospirillum sp. SherDot2 | MPMX19_05182 | | HTH-type transcriptional regulator HdfR | no data | 37 | 93 |
| | Rhizobium sp. OAE497 | ABIE40_RS16120 | | LysR substrate-binding domain-containing protein | no data | 37 | 84 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS04750 | | LysR substrate-binding domain-containing protein | insig. | 39 | 84 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS38695 | | LysR substrate-binding domain-containing protein | insig. | 36 | 89 |
| | Azospirillum sp. SherDot2 | MPMX19_02475 | | HTH-type transcriptional regulator ArgP | insig. | 42 | 85 |
| | Xanthobacter sp. DMC5 | GFF3348 | | HTH-type transcriptional regulator GltC | insig. | 39 | 84 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04000 | | HTH-type transcriptional regulator CysL | insig. | 35 | 86 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS30705 | | LysR family transcriptional regulator | insig. | 36 | 90 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03456 | | transcriptional regulator, LysR family | insig. | 40 | 89 |
| | Azospirillum sp. SherDot2 | MPMX19_06476 | | HTH-type transcriptional regulator ArgP | insig. | 38 | 91 |
| | Dinoroseobacter shibae DFL-12 | Dshi_2125 | | transcriptional regulator, LysR family (RefSeq) | insig. | 36 | 84 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF3101 | | LysR family transcriptional regulator lrhA | insig. | 37 | 90 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS10935 | | LysR family transcriptional regulator | no data | 37 | 90 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS15155 | | LysR substrate-binding domain-containing protein | insig. | 35 | 92 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS10150 | | LysR family transcriptional regulator | insig. | 34 | 90 |
| | Alteromonas macleodii MIT1002 | MIT1002_00554 | | HTH-type transcriptional regulator YofA | insig. | 31 | 91 |
| | Azospirillum brasilense Sp245 | AZOBR_RS13110 | | LysR family transcriptional regulator | no data | 37 | 94 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01284 | | transcriptional regulator, LysR family | insig. | 38 | 86 |
| o | Dechlorosoma suillum PS | Dsui_1371 | | transcriptional regulator | insig. | 39 | 89 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF5537 | | Transcriptional regulator, LysR family | insig. | 38 | 87 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS15435 | | LysR substrate-binding domain-containing protein | insig. | 36 | 92 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS11840 | | LysR family transcriptional regulator | insig. | 36 | 91 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS21645 | | LysR family transcriptional regulator | insig. | 37 | 86 |
| | Paraburkholderia graminis OAS925 | ABIE53_005380 | | DNA-binding transcriptional LysR family regulator | insig. | 39 | 89 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS30590 | | LysR family transcriptional regulator | insig. | 37 | 87 |
| | Variovorax sp. SCN45 | GFF3844 | | Transcriptional regulator, LysR family | insig. | 39 | 83 |
| | Pseudomonas stutzeri RCH2 | Psest_3087 | | Transcriptional regulator | sig. | 39 | 89 |
| | Sinorhizobium meliloti 1021 | SMa1979 | | LysR family transcriptional regulator | insig. | 35 | 84 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_05275 | | LysR family transcriptional regulator | insig. | 41 | 73 |
| | Pseudomonas simiae WCS417 | PS417_18795 | | LysR family transcriptional regulator | insig. | 33 | 93 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS07395 | | LysR family transcriptional regulator | cofit | 38 | 78 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS28515 | | LysR family transcriptional regulator | insig. | 36 | 89 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS36635 | | LysR substrate-binding domain-containing protein | insig. | 37 | 90 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_12265 | | LysR family transcriptional regulator | insig. | 37 | 92 |
| | Rhizobium sp. OAE497 | ABIE40_RS11195 | | LysR family transcriptional regulator | insig. | 35 | 89 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS10960 | | transcriptional regulator LrhA | insig. | 35 | 83 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS10960 | | transcriptional regulator LrhA | sig. | 35 | 83 |
| | Pseudomonas putida KT2440 | PP_3534 | | Transcriptional regulator, LysR family | insig. | 35 | 91 |
| | Erwinia amylovora T8 | OLJFJH_11405 | | transcriptional regulator LrhA | no data | 36 | 84 |
| | Pseudomonas sp. SVBP6 | COO64_RS08550 | | LysR substrate-binding domain-containing protein | insig. | 35 | 84 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS03880 | | LysR family transcriptional regulator | insig. | 40 | 84 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS07915 | | LysR substrate-binding domain-containing protein | insig. | 36 | 93 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS20860 | | LysR family transcriptional regulator | insig. | 32 | 92 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS20860 | | LysR family transcriptional regulator | sig. | 32 | 92 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_3000 | | Transcriptional regulator | insig. | 40 | 86 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS32260 | | LysR substrate-binding domain-containing protein | insig. | 37 | 82 |
| | Ralstonia solanacearum GMI1000 | RS_RS03085 | | LysR family transcriptional regulator | insig. | 34 | 86 |
| | Sinorhizobium meliloti 1021 | SMc04163 | | transcriptional regulator | insig. | 34 | 89 |
| | Pantoea sp. MT58 | IAI47_06355 | | transcriptional regulator LrhA | strong | 36 | 84 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS08165 | | LysR substrate-binding domain-containing protein | insig. | 35 | 93 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS00330 | | transcriptional regulator LrhA | cofit | 36 | 84 |
| | Azospirillum sp. SherDot2 | MPMX19_05989 | | HTH-type transcriptional regulator HdfR | insig. | 36 | 87 |