Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Serratia liquefaciens MT49 | IAI46_04245 | | MurR/RpiR family transcriptional regulator | insig. | 100 | 100 |
o | Dickeya dianthicola 67-19 | HGI48_RS16735 | | SIS domain-containing protein | cofit | 78 | 100 |
o | Dickeya dianthicola ME23 | DZA65_RS17825 | | MurR/RpiR family transcriptional regulator | insig. | 78 | 100 |
o | Rahnella sp. WP5 | EX31_RS21125 | | MurR/RpiR family transcriptional regulator | insig. | 81 | 100 |
o | Pectobacterium carotovorum WPP14 | HER17_RS04535 | | MurR/RpiR family transcriptional regulator | insig. | 79 | 100 |
o | Enterobacter sp. TBS_079 | MPMX20_01667 | | hypothetical protein | sig. | 73 | 100 |
o | Pantoea sp. MT58 | IAI47_15275 | | MurR/RpiR family transcriptional regulator HpxU | insig. | 74 | 100 |
o | Dickeya dadantii 3937 | DDA3937_RS16665 | | MurR/RpiR family transcriptional regulator | sig. | 78 | 100 |
o | Enterobacter asburiae PDN3 | EX28DRAFT_1939 | | transcriptional regulator, RpiR family | insig. | 73 | 100 |
o | Klebsiella michiganensis M5al | BWI76_RS10565 | | sugar isomerase | sig. | 73 | 100 |
o | Alteromonas macleodii MIT1002 | MIT1002_01597 | | putative DNA-binding transcriptional regulator | cofit | 35 | 97 |
| Pantoea sp. MT58 | IAI47_03370 | | MurR/RpiR family transcriptional regulator | insig. | 35 | 98 |
| Rahnella sp. WP5 | EX31_RS07425 | | MurR/RpiR family transcriptional regulator | insig. | 34 | 98 |
o | Sinorhizobium meliloti 1021 | SMc04363 | | hypothetical protein | insig. | 34 | 97 |
o | Dinoroseobacter shibae DFL-12 | Dshi_0959 | | transcriptional regulator, RpiR family (RefSeq) | insig. | 30 | 97 |
o | Azospirillum sp. SherDot2 | MPMX19_05393 | | hypothetical protein | insig. | 31 | 98 |
| Sinorhizobium meliloti 1021 | SMa0520 | | RpiR family transcriptional regulator | sig. | 27 | 97 |
| Castellaniella sp019104865 MT123 | ABCV34_RS13380 | | MurR/RpiR family transcriptional regulator | insig. | 27 | 88 |
o | Cupriavidus basilensis FW507-4G11 | RR42_RS26890 | | RpiR family transcriptional regulator | insig. | 27 | 88 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS04920 | | MurR/RpiR family transcriptional regulator | insig. | 27 | 87 |
| Sinorhizobium meliloti 1021 | SMc02353 | | hypothetical protein | insig. | 26 | 87 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04463 | | transcriptional regulator, RpiR family | strong | 22 | 91 |
| Paraburkholderia graminis OAS925 | ABIE53_002944 | | DNA-binding MurR/RpiR family transcriptional regulator | strong | 22 | 91 |
| Burkholderia phytofirmans PsJN | BPHYT_RS13890 | | RpiR family transcriptional regulator | strong | 23 | 91 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS05080 | | MurR/RpiR family transcriptional regulator | sig. | 22 | 91 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS12105 | | RpiR family transcriptional regulator | strong | 24 | 87 |
o | Variovorax sp. SCN45 | GFF2285 | | Transcriptional regulator, RpiR family | insig. | 27 | 89 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02617 | | transcriptional regulator, RpiR family | insig. | 28 | 88 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS10985 | | MurR/RpiR family transcriptional regulator | insig. | 28 | 65 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS12065 | | MurR/RpiR family transcriptional regulator | strong | 22 | 94 |
| Rhodanobacter denitrificans MT42 | LRK55_RS11800 | | MurR/RpiR family transcriptional regulator | cofit | 22 | 96 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS17530 | | RpiR family transcriptional regulator | strong | 26 | 82 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS06120 | | transcriptional regulator | sig. | 27 | 64 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS11695 | | MurR/RpiR family transcriptional regulator | insig. | 26 | 90 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05904 | | transcriptional regulator, RpiR family | no data | 26 | 65 |
o | Acidovorax sp. GW101-3H11 | Ac3H11_1959 | | Transcriptional regulator, RpiR family | insig. | 26 | 97 |
| Phaeobacter inhibens DSM 17395 | PGA1_c27130 | | putative HTH-type transcriptional regulator | strong | 24 | 96 |
| Azospirillum sp. SherDot2 | MPMX19_04844 | | HTH-type transcriptional regulator HexR | insig. | 26 | 66 |
| Burkholderia phytofirmans PsJN | BPHYT_RS27175 | | DNA-binding protein | insig. | 25 | 65 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS15395 | | MurR/RpiR family transcriptional regulator | sig. | 23 | 89 |
| Ralstonia solanacearum UW163 | UW163_RS12855 | | MurR/RpiR family transcriptional regulator | sig. | 23 | 89 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS00230 | | MurR/RpiR family transcriptional regulator | insig. | 26 | 80 |
| Ralstonia solanacearum UW163 | UW163_RS13560 | | MurR/RpiR family transcriptional regulator | no data | 26 | 80 |
| Paraburkholderia graminis OAS925 | ABIE53_005821 | | DNA-binding MurR/RpiR family transcriptional regulator | strong | 25 | 65 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2175 | | Transcriptional regulator, RpiR family | strong | 27 | 82 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS09180 | | transcriptional regulator | insig. | 24 | 87 |
| Sinorhizobium meliloti 1021 | SMc01602 | | hypothetical protein | insig. | 23 | 96 |
| Fusobacterium nucleatum SB010 | HUW76_09985 | | MurR/RpiR family transcriptional regulator | cofit | 18 | 95 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_01500 | | RpiR family transcriptional regulator | strong | 27 | 82 |
| Escherichia fergusonii Becca | EFB2_04801 | | putative HTH-type transcriptional regulator YbbH | insig. | 24 | 56 |
| Ralstonia solanacearum PSI07 | RPSI07_RS17960 | | MurR/RpiR family transcriptional regulator | insig. | 23 | 89 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS16875 | | MurR/RpiR family transcriptional regulator | insig. | 26 | 66 |
| Rhizobium sp. OAE497 | ABIE40_RS20155 | | MurR/RpiR family transcriptional regulator | cofit | 24 | 90 |
| Rhizobium sp. OAE497 | ABIE40_RS12055 | | MurR/RpiR family transcriptional regulator | sig. | 19 | 96 |
| Pseudomonas syringae pv. syringae B728a | Psyr_3275 | | Helix-turn-helix protein RpiR:Sugar isomerase (SIS) | sig. | 22 | 85 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3275 | | Helix-turn-helix protein RpiR:Sugar isomerase (SIS) | insig. | 22 | 85 |
| Agrobacterium fabrum C58 | Atu4514 | | RpiR family transcriptional regulator | strong | 22 | 90 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS26180 | | hypothetical protein | insig. | 28 | 84 |
| Burkholderia phytofirmans PsJN | BPHYT_RS16740 | | transcriptional regulator | strong | 24 | 64 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4395 | | Transcriptional regulator RpiR in protein degradation cluster | no data | 27 | 78 |
| Escherichia coli Nissle 1917 | ECOLIN_RS22020 | | MurR/RpiR family transcriptional regulator | insig. | 25 | 56 |
| Ralstonia solanacearum PSI07 | RPSI07_RS17250 | | MurR/RpiR family transcriptional regulator | insig. | 25 | 91 |
| Pseudomonas sp. RS175 | PFR28_02426 | | HTH-type transcriptional regulator MurR | strong | 22 | 85 |
| Escherichia fergusonii Becca | EFB2_00784 | | hypothetical protein | insig. | 27 | 73 |
| Escherichia coli ECRC101 | OKFHMN_18860 | rpiR | MurR/RpiR family transcriptional regulator | insig. | 27 | 73 |
| Escherichia coli ECRC101 | MCAODC_09375 | rpiR | MurR/RpiR family transcriptional regulator | insig. | 27 | 73 |
| Escherichia coli ECRC102 | NIAGMN_16625 | rpiR | MurR/RpiR family transcriptional regulator | insig. | 27 | 73 |
| Escherichia coli ECRC98 | JDDGAC_22495 | rpiR | MurR/RpiR family transcriptional regulator | no data | 27 | 73 |
| Escherichia coli ECRC99 | KEDOAH_09285 | rpiR | MurR/RpiR family transcriptional regulator | no data | 27 | 73 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04279 | | transcriptional regulator, RpiR family | sig. | 23 | 64 |
| Agrobacterium fabrum C58 | Atu2145 | | transcriptional regulator, RpiR family | sig. | 21 | 96 |
| Pseudomonas simiae WCS417 | PS417_11845 | | RpiR family transcriptional regulator | strong | 20 | 85 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4273 | | Predicted transcriptional regulator of the myo-inositol catabolic operon | sig. | 20 | 85 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_27995 | | RpiR family transcriptional regulator | strong | 30 | 54 |
| Escherichia coli Nissle 1917 | ECOLIN_RS17460 | | MurR/RpiR family transcriptional regulator | cofit | 27 | 73 |
| Azospirillum brasilense Sp245 | AZOBR_RS30190 | | transcriptional regulator | insig. | 25 | 49 |
| Pseudomonas fluorescens SBW25 | PFLU_RS12580 | | MurR/RpiR family transcriptional regulator | strong | 20 | 85 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS12580 | | MurR/RpiR family transcriptional regulator | strong | 20 | 85 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_3704 | | Transcriptional regulator RpiR in protein degradation cluster | strong | 26 | 78 |
| Rahnella sp. WP5 | EX31_RS01205 | | MurR/RpiR family transcriptional regulator | insig. | 24 | 73 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_21330 | | RpiR family transcriptional regulator | sig. | 20 | 86 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5851 | | Transcriptional regulator, RpiR family | insig. | 28 | 82 |
| Ralstonia solanacearum GMI1000 | RS_RS00410 | | MurR/RpiR family transcriptional regulator | insig. | 27 | 66 |
| Enterobacter asburiae PDN3 | EX28DRAFT_3062 | | transcriptional regulator, RpiR family | insig. | 26 | 73 |
| Enterobacter sp. TBS_079 | MPMX20_03871 | | hypothetical protein | insig. | 26 | 73 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_23155 | | RpiR family transcriptional regulator | strong | 20 | 85 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_510 | | Predicted transcriptional regulator of the myo-inositol catabolic operon | strong | 20 | 85 |
| Castellaniella sp019104865 MT123 | ABCV34_RS13500 | | MurR/RpiR family transcriptional regulator | insig. | 26 | 93 |
| Enterobacter sp. TBS_079 | MPMX20_02354 | | hypothetical protein | insig. | 30 | 55 |
| Rhizobium sp. OAE497 | ABIE40_RS16980 | | MurR/RpiR family transcriptional regulator | insig. | 23 | 99 |
| Ralstonia solanacearum GMI1000 | RS_RS06905 | | MurR/RpiR family transcriptional regulator | insig. | 25 | 91 |
| Pseudomonas sp. S08-1 | OH686_23395 | | hypothetical protein | strong | 24 | 94 |
| Ralstonia solanacearum PSI07 | RPSI07_RS23545 | | MurR/RpiR family transcriptional regulator | insig. | 27 | 67 |
| Enterobacter asburiae PDN3 | EX28DRAFT_1118 | | transcriptional regulator, RpiR family | insig. | 27 | 54 |
| Serratia liquefaciens MT49 | IAI46_12855 | | MurR/RpiR family transcriptional regulator | insig. | 20 | 90 |
| Paraburkholderia graminis OAS925 | ABIE53_003274 | | DNA-binding MurR/RpiR family transcriptional regulator | insig. | 27 | 62 |
| Erwinia tracheiphila SCR3 | LU632_RS13365 | | MurR/RpiR family transcriptional regulator | cofit | 24 | 73 |
| Pseudomonas putida KT2440 | PP_1021 | | DNA-binding transcriptional regulator | strong | 22 | 68 |
| Rahnella sp. WP5 | EX31_RS10635 | | MurR/RpiR family transcriptional regulator | sig. | 28 | 49 |
| Pseudomonas sp. RS175 | PFR28_01273 | | hypothetical protein | cofit | 27 | 85 |