Homologs of HSERO_RS04295 from Herbaspirillum seropedicae SmR1

diguanylate cyclase
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Herbaspirillum seropedicae SmR1 HSERO_RS04295 diguanylate cyclase strong 100 100
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01476 diguanylate cyclase/phosphodiesterase insig. 46 96
  Burkholderia phytofirmans PsJN BPHYT_RS29225 diguanylate phosphodiesterase insig. 45 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS20660 EAL domain-containing protein insig. 44 97
  Paraburkholderia graminis OAS925 ABIE53_005195 diguanylate cyclase (GGDEF)-like protein sig. 47 90
  Pseudomonas fluorescens SBW25 PFLU_RS13445 bifunctional diguanylate cyclase/phosphodiesterase insig. 40 96
  Pseudomonas fluorescens SBW25-INTG PFLU_RS13445 bifunctional diguanylate cyclase/phosphodiesterase insig. 40 96
  Pseudomonas simiae WCS417 PS417_12760 histidine kinase insig. 40 96
  Ralstonia solanacearum GMI1000 RS_RS02540 bifunctional diguanylate cyclase/phosphodiesterase insig. 41 97
  Pseudomonas sp. RS175 PFR28_02457 putative signaling protein insig. 39 97
  Pseudomonas fluorescens FW300-N2E3 AO353_22910 histidine kinase insig. 39 96
  Pseudomonas fluorescens FW300-N2C3 AO356_22925 histidine kinase insig. 39 96
  Ralstonia solanacearum PSI07 RPSI07_RS21500 bifunctional diguanylate cyclase/phosphodiesterase insig. 40 95
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS11715 bifunctional diguanylate cyclase/phosphodiesterase insig. 41 96
  Ralstonia solanacearum UW163 UW163_RS01870 bifunctional diguanylate cyclase/phosphodiesterase insig. 41 96
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_467 Sensory box/GGDEF family protein insig. 39 96
  Rahnella sp. WP5 EX31_RS12105 bifunctional diguanylate cyclase/phosphodiesterase insig. 39 95
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3263 Sensory box/GGDEF family protein insig. 39 96
  Cupriavidus basilensis FW507-4G11 RR42_RS22465 membrane protein insig. 39 96
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4670 Sensory box/GGDEF family protein insig. 38 96
  Enterobacter asburiae PDN3 EX28DRAFT_3316 diguanylate cyclase (GGDEF) domain insig. 38 96
  Pantoea sp. MT58 IAI47_03280 EAL domain-containing protein insig. 38 97
  Ralstonia sp. UNC404CL21Col ABZR87_RS07670 bifunctional diguanylate cyclase/phosphodiesterase insig. 39 96
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2120 FIG00554530: hypothetical protein insig. 39 96
  Enterobacter sp. TBS_079 MPMX20_04172 putative signaling protein insig. 37 99
  Ralstonia solanacearum PSI07 RPSI07_RS05100 bifunctional diguanylate cyclase/phosphodiesterase insig. 50 59
  Pseudomonas putida KT2440 PP_3581 conserved membrane protein of unknown function insig. 38 98
  Paraburkholderia sabiae LMG 24235 QEN71_RS30355 bifunctional diguanylate cyclase/phosphodiesterase insig. 38 97
  Ralstonia sp. UNC404CL21Col ABZR87_RS19490 bifunctional diguanylate cyclase/phosphodiesterase strong 50 60
  Herbaspirillum seropedicae SmR1 HSERO_RS16570 membrane protein insig. 39 93
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2826.1 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 40 95
  Ralstonia solanacearum GMI1000 RS_RS22415 bifunctional diguanylate cyclase/phosphodiesterase insig. 50 59
  Pseudomonas syringae pv. syringae B728a Psyr_2486 diguanylate cyclase/phosphodiesterase insig. 38 96
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2486 diguanylate cyclase/phosphodiesterase insig. 38 96
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS18455 phosphodiesterase insig. 49 59
  Ralstonia solanacearum UW163 UW163_RS20675 phosphodiesterase insig. 49 59
  Shewanella oneidensis MR-1 SO0341 sensory box protein (NCBI ptt file) insig. 45 62
  Shewanella sp. ANA-3 Shewana3_3829 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) cofit 45 61
  Herbaspirillum seropedicae SmR1 HSERO_RS18020 diguanylate cyclase insig. 47 59
  Magnetospirillum magneticum AMB-1 AMB_RS06165 CBS domain-containing protein insig. 43 64
  Dechlorosoma suillum PS Dsui_2148 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 48 60
  Magnetospirillum magneticum AMB-1 AMB_RS18310 bifunctional diguanylate cyclase/phosphodiesterase cofit 45 60
  Pantoea sp. MT58 IAI47_03275 EAL domain-containing protein insig. 35 96
  Acidovorax sp. GW101-3H11 Ac3H11_2715 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 46 59
  Dechlorosoma suillum PS Dsui_0894 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 46 60
  Shewanella amazonensis SB2B Sama_3298 sensory box protein (RefSeq) insig. 45 60
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04630 PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein insig. 42 67
  Dechlorosoma suillum PS Dsui_1429 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 44 61
  Variovorax sp. SCN45 GFF3184 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 37 89
  Dechlorosoma suillum PS Dsui_1564 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 46 60
  Variovorax sp. SCN45 GFF1448 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) sig. 45 62
  Acidovorax sp. GW101-3H11 Ac3H11_446 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) strong 45 59
  Burkholderia phytofirmans PsJN BPHYT_RS03250 diguanylate cyclase insig. 42 67
  Dechlorosoma suillum PS Dsui_1011 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 43 66
  Dechlorosoma suillum PS Dsui_1531 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 42 66
  Pseudomonas fluorescens FW300-N2E3 AO353_17145 diguanylate phosphodiesterase insig. 34 95
  Magnetospirillum magneticum AMB-1 AMB_RS23225 GGDEF domain-containing protein insig. 44 61
  Acidovorax sp. GW101-3H11 Ac3H11_448 Sensory box/GGDEF family protein insig. 46 60
  Magnetospirillum magneticum AMB-1 AMB_RS21020 bifunctional diguanylate cyclase/phosphodiesterase insig. 42 61
  Paraburkholderia sabiae LMG 24235 QEN71_RS02090 EAL domain-containing protein insig. 41 67
  Dechlorosoma suillum PS Dsui_2365 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 44 61
  Pseudomonas sp. RS175 PFR28_03785 hypothetical protein insig. 42 62
  Pseudomonas sp. S08-1 OH686_16235 Sensory box/GGDEF family protein insig. 45 60
  Shewanella sp. ANA-3 Shewana3_4029 diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) (RefSeq) cofit 44 60
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4868 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 42 59
  Pseudomonas fluorescens FW300-N2E3 AO353_14025 diguanylate phosphodiesterase strong 42 62
  Pseudomonas fluorescens FW300-N2E3 AO353_23975 diguanylate cyclase strong 41 61
  Pseudomonas syringae pv. syringae B728a Psyr_4493 PAS:GGDEF insig. 41 61
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4493 PAS:GGDEF cofit 41 61
  Pseudomonas syringae pv. syringae B728a Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 42 62
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 42 62
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1452 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 42 62
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1728 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 41 60
  Pseudomonas fluorescens FW300-N2C3 AO356_15730 diguanylate phosphodiesterase insig. 42 62
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5083 Serine hydroxymethyltransferase (EC 2.1.2.1) sig. 42 62
  Pseudomonas sp. S08-1 OH686_14965 Sensory box/GGDEF family protein cofit 45 60
  Dechlorosoma suillum PS Dsui_3161 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein sig. 42 63
  Pseudomonas fluorescens SBW25 PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase cofit 42 62
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase sig. 42 62
  Burkholderia phytofirmans PsJN BPHYT_RS27880 diguanylate phosphodiesterase insig. 41 60
  Enterobacter asburiae PDN3 EX28DRAFT_1002 diguanylate cyclase (GGDEF) domain insig. 32 97
  Azospirillum sp. SherDot2 MPMX19_00480 hypothetical protein insig. 42 64
  Dechlorosoma suillum PS Dsui_2547 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 44 60
  Pseudomonas sp. S08-1 OH686_08910 Phytochrome-like protein / Cph2 cofit 42 61
  Pseudomonas simiae WCS417 PS417_24275 diguanylate phosphodiesterase strong 42 62
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2779 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 42 62
  Magnetospirillum magneticum AMB-1 AMB_RS23535 PAS domain S-box protein cofit 44 60
  Enterobacter sp. TBS_079 MPMX20_02445 putative signaling protein insig. 31 97
  Pseudomonas putida KT2440 PP_0672 Sensory box protein sig. 42 62
  Marinobacter adhaerens HP15 HP15_806 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 43 59
  Rhodopseudomonas palustris CGA009 TX73_004010 EAL domain-containing protein insig. 44 61
  Dechlorosoma suillum PS Dsui_2160 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 43 60
  Synechococcus elongatus PCC 7942 Synpcc7942_1355 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 42 62
  Pseudomonas fluorescens FW300-N2C3 AO356_24220 diguanylate cyclase insig. 43 60
  Herbaspirillum seropedicae SmR1 HSERO_RS23840 hypothetical protein sig. 44 59
  Pseudomonas sp. S08-1 OH686_07355 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 44 60
  Kangiella aquimarina DSM 16071 B158DRAFT_2502 periplasmic sensor diguanylate cyclase/phosphodiesterase insig. 44 59
  Azospirillum brasilense Sp245 AZOBR_RS04390 signal peptide protein cofit 44 59
  Dechlorosoma suillum PS Dsui_0262 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 42 60
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3221 Sensory box/GGDEF family protein insig. 34 95