Homologs of HMPREF1078_RS06065 from Parabacteroides merdae CL09T00C40

RraA family protein
SEED: demethylmenaquinone methyltransferase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS06065 RraA family protein insig. 100 100
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS13680 dimethylmenaquinone methyltransferase insig. 72 99
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS13035 RraA family protein insig. 60 100
o Serratia liquefaciens MT49 IAI46_17475 RraA family protein insig. 56 99
o Escherichia coli ECOR38 HEPCGN_01235 dimethylmenaquinone methyltransferase insig. 55 99
o Cupriavidus basilensis FW507-4G11 RR42_RS28415 diguanylate cyclase insig. 31 90
  Pseudomonas syringae pv. syringae B728a Psyr_3070 Dimethylmenaquinone methyltransferase insig. 30 62
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3070 Dimethylmenaquinone methyltransferase insig. 30 62
  Pseudomonas fluorescens SBW25 PFLU_RS11340 RraA family protein insig. 37 61
  Pseudomonas fluorescens SBW25-INTG PFLU_RS11340 RraA family protein insig. 37 61
  Enterobacter asburiae PDN3 EX28DRAFT_4072 Demethylmenaquinone methyltransferase insig. 31 87
o Variovorax sp. SCN45 GFF1496 Demethylmenaquinone methyltransferase-like protein no data 32 91
  Paraburkholderia graminis OAS925 ABIE53_005332 regulator of RNase E activity RraA insig. 33 61
  Enterobacter sp. TBS_079 MPMX20_04390 4-hydroxy-4-methyl-2-oxoglutarate aldolase/4-carboxy-4-hydroxy-2-oxoadipate aldolase insig. 30 87
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03423 Regulator of RNase E activity RraA no data 33 61
o Variovorax sp. OAS795 ABID97_RS27645 RraA family protein no data 31 87
  Dickeya dianthicola ME23 DZA65_RS08135 RraA family protein insig. 31 72
  Bosea sp. OAE506 ABIE41_RS10510 ribonuclease activity regulator RraA insig. 32 58
  Pseudomonas sp. RS175 PFR28_02019 hypothetical protein insig. 27 63
  Variovorax sp. OAS795 ABID97_RS25650 ribonuclease activity regulator RraA sig. 33 58
o Pantoea sp. MT58 IAI47_20770 RraA family protein insig. 30 89
o Pseudomonas fluorescens FW300-N2C3 AO356_25365 diguanylate cyclase insig. 28 97
  Cupriavidus basilensis FW507-4G11 RR42_RS35295 diguanylate cyclase insig. 37 63
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5061 Demethylmenaquinone methyltransferase no data 31 83
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05962 RraA famliy insig. 31 83
  Paraburkholderia sabiae LMG 24235 QEN71_RS10100 ribonuclease activity regulator RraA insig. 31 61
  Variovorax sp. SCN45 GFF748 4-carboxy-4-hydroxy-2-oxoadipate aldolase (EC 4.1.3.17) no data 31 68
  Klebsiella michiganensis M5al BWI76_RS26545 dimethylmenaquinone methyltransferase insig. 35 61
o Azospirillum brasilense Sp245 AZOBR_RS00160 demethylmenaquinone methyltransferase no data 28 87
  Variovorax sp. OAS795 ABID97_RS01300 ribonuclease activity regulator RraA insig. 34 61
  Azospirillum brasilense Sp245 AZOBR_RS26905 hypothetical protein insig. 30 63
  Dickeya dianthicola 67-19 HGI48_RS07585 RraA family protein no data 30 72
  Cupriavidus basilensis FW507-4G11 RR42_RS26535 diguanylate cyclase insig. 31 86
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0524 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase insig. 29 61
  Dickeya dadantii 3937 DDA3937_RS07770 RraA family protein sig. 27 72
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06498 Regulator of RNase E activity RraA insig. 32 83
  Pseudomonas fluorescens FW300-N2C3 AO356_25370 diguanylate cyclase no data 26 87
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3472 Bll0377 protein insig. 31 63
  Agrobacterium fabrum C58 Atu3973 hypothetical protein strong 31 58
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2963 Dimethylmenaquinone methyltransferase family protein insig. 29 84
o Azospirillum sp. SherDot2 MPMX19_03872 hypothetical protein insig. 26 91
o Desulfovibrio vulgaris Miyazaki F DvMF_2302 Dimethylmenaquinone methyltransferase (RefSeq) insig. 30 88
o Ralstonia solanacearum GMI1000 RS_RS23080 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase insig. 27 86
  Burkholderia phytofirmans PsJN BPHYT_RS24290 hypothetical protein insig. 33 58
  Sinorhizobium meliloti 1021 SM_b20114 hypothetical protein insig. 32 52
  Methanococcus maripaludis JJ MMJJ_RS07820 bifunctional hexulose-6-phosphate synthase/ribonuclease regulator sig. 31 59
  Ralstonia solanacearum PSI07 RPSI07_RS05660 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase no data 29 80
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5068 FIG00974267: hypothetical protein no data 29 80
  Herbaspirillum seropedicae SmR1 HSERO_RS22295 4-hydroxy-4-methyl-2-oxoglutarate aldolase insig. 35 48
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06356 RraA famliy insig. 28 83
  Pseudomonas fluorescens SBW25 PFLU_RS21075 RraA family protein insig. 33 60
  Pseudomonas fluorescens SBW25-INTG PFLU_RS21075 RraA family protein insig. 33 60
  Methanococcus maripaludis S2 MMP_RS06530 bifunctional hexulose-6-phosphate synthase/ribonuclease regulator strong 30 59
  Variovorax sp. SCN45 GFF5400 Demethylmenaquinone methyltransferase-like protein insig. 26 92
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5067 PUTATIVE TRANSFERASE PROTEIN( EC:2.- ) sig. 26 87
  Sinorhizobium meliloti 1021 SMc00502 hypothetical protein insig. 25 93
  Variovorax sp. SCN45 GFF4160 Demethylmenaquinone methyltransferase-like protein insig. 35 49
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF177 Demethylmenaquinone methyltransferase insig. 33 88
  Paraburkholderia graminis OAS925 ABIE53_006318 RraA family protein insig. 28 77
  Burkholderia phytofirmans PsJN BPHYT_RS28470 hypothetical protein insig. 29 62
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS17940 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase insig. 31 73
  Ralstonia solanacearum UW163 UW163_RS21200 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase insig. 31 73
  Pseudomonas simiae WCS417 PS417_19020 dimethylmenaquinone methyltransferase sig. 31 60
  Azospirillum brasilense Sp245 AZOBR_RS25265 4-hydroxy-4-methyl-2-oxoglutarate aldolase insig. 30 58
  Ralstonia solanacearum PSI07 RPSI07_RS05670 diguanylate cyclase cofit 29 54
  Rahnella sp. WP5 EX31_RS10205 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase insig. 29 73
  Paraburkholderia sabiae LMG 24235 QEN71_RS19630 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase no data 25 92
  Cupriavidus basilensis FW507-4G11 RR42_RS33310 hypothetical protein insig. 32 47
  Variovorax sp. SCN45 GFF623 Demethylmenaquinone methyltransferase-like protein insig. 30 90
  Variovorax sp. SCN45 GFF1567 Demethylmenaquinone methyltransferase-like protein sig. 27 49
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS17925 diguanylate cyclase insig. 24 80
  Ralstonia solanacearum UW163 UW163_RS21215 diguanylate cyclase insig. 24 80
  Variovorax sp. SCN45 GFF7259 no description insig. 29 51
  Ralstonia solanacearum GMI1000 RS_RS23095 diguanylate cyclase insig. 24 77
  Magnetospirillum magneticum AMB-1 AMB_RS01280 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase cofit 27 75
  Ralstonia solanacearum PSI07 RPSI07_RS06345 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase cofit 25 73
  Pseudomonas fluorescens FW300-N2C3 AO356_25360 dimethylmenaquinone methyltransferase insig. 24 58
  Ralstonia solanacearum PSI07 RPSI07_RS02810 RraA family protein insig. 26 95
  Ralstonia sp. UNC404CL21Col ABZR87_RS17530 diguanylate cyclase no data 31 81
  Agrobacterium fabrum C58 Atu5329 hypothetical protein no data 30 80
  Azospirillum sp. SherDot2 MPMX19_01903 4-carboxy-4-hydroxy-2-oxoadipate aldolase no data 27 89
  Cupriavidus basilensis FW507-4G11 RR42_RS28420 4-hydroxy-4-methyl-2-oxoglutarate aldolase insig. 30 87
  Cupriavidus basilensis FW507-4G11 RR42_RS34615 dimethylmenaquinone methyltransferase no data 26 91
  Ralstonia solanacearum GMI1000 RS_RS23090 diguanylate cyclase insig. 30 54
  Cupriavidus basilensis FW507-4G11 RR42_RS26225 dimethylmenaquinone methyltransferase no data 27 80
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS17930 diguanylate cyclase insig. 28 63
  Ralstonia solanacearum UW163 UW163_RS21210 diguanylate cyclase insig. 28 63
  Variovorax sp. OAS795 ABID97_RS27355 RraA family protein insig. 28 59
  Pseudomonas syringae pv. syringae B728a Psyr_2595 Dimethylmenaquinone methyltransferase insig. 27 83
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2595 Dimethylmenaquinone methyltransferase insig. 27 83
  Variovorax sp. SCN45 GFF3058 Demethylmenaquinone methyltransferase-like protein insig. 25 94
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5069 Demethylmenaquinone methyltransferase no data 24 55
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3799 4-carboxy-4-hydroxy-2-oxoadipate aldolase (EC 4.1.3.17) sig. 27 74
  Ralstonia solanacearum PSI07 RPSI07_RS05675 diguanylate cyclase insig. 23 77
  Herbaspirillum seropedicae SmR1 HSERO_RS22260 diguanylate cyclase no data 32 87
  Shewanella sp. ANA-3 Shewana3_2373 ribonuclease activity regulator protein RraA (RefSeq) strong 31 45
  Lysobacter sp. OAE881 ABIE51_RS04140 ribonuclease E activity regulator RraA no data 34 47
  Azospirillum brasilense Sp245 AZOBR_RS33695 4-hydroxy-4-methyl-2-oxoglutarate aldolase insig. 34 51
  Acidovorax sp. GW101-3H11 Ac3H11_143 Demethylmenaquinone methyltransferase insig. 30 86
  Burkholderia phytofirmans PsJN BPHYT_RS30330 hypothetical protein no data 26 77