Homologs of GFF7429 from Variovorax sp. SCN45

Integrase/recombinase, RitB

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF7429 Integrase/recombinase, RitB no data 100 100
o Variovorax sp. OAS795 ABID97_RS18465 tyrosine-type recombinase/integrase insig. 88 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS39865 tyrosine-type recombinase/integrase insig. 40 98
  Sinorhizobium meliloti 1021 SMa1619 integrase/recombinase no data 40 97
o Sinorhizobium meliloti 1021 SMa2187 Integrase/recombinase no data 40 97
  Dinoroseobacter shibae DFL-12 Dshi_3697 integrase family protein (RefSeq) no data 35 98
o Dinoroseobacter shibae DFL-12 Dshi_4005 integrase family protein (RefSeq) no data 35 98
o Rhizobium sp. OAE497 ABIE40_RS29770 tyrosine-type recombinase/integrase insig. 36 94
  Paraburkholderia sabiae LMG 24235 QEN71_RS42890 tyrosine-type recombinase/integrase insig. 44 65
  Paraburkholderia sabiae LMG 24235 QEN71_RS44395 tyrosine-type recombinase/integrase insig. 30 95
  Paraburkholderia sabiae LMG 24235 QEN71_RS42355 tyrosine-type recombinase/integrase insig. 36 65
  Burkholderia phytofirmans PsJN BPHYT_RS01130 hypothetical protein insig. 33 74
  Paraburkholderia sabiae LMG 24235 QEN71_RS40120 tyrosine-type recombinase/integrase insig. 30 98
  Paraburkholderia sabiae LMG 24235 QEN71_RS44190 tyrosine-type recombinase/integrase no data 32 77
  Paraburkholderia sabiae LMG 24235 QEN71_RS44480 tyrosine-type recombinase/integrase no data 32 77
  Paraburkholderia sabiae LMG 24235 QEN71_RS44355 tyrosine-type recombinase/integrase insig. 31 98
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0027 Site-specific recombinase XerD no data 27 96
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2548 Site-specific recombinase XerD no data 27 96
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4349 Site-specific recombinase XerD no data 27 96
  Paraburkholderia sabiae LMG 24235 QEN71_RS44550 tyrosine-type recombinase/integrase insig. 38 50
  Paraburkholderia sabiae LMG 24235 QEN71_RS44615 tyrosine-type recombinase/integrase insig. 36 58
  Bacteroides ovatus ATCC 8483 BACOVA_01050 site-specific recombinase, phage integrase family/ribosomal subunit interface protein insig. 30 52
  Dechlorosoma suillum PS Dsui_1217 tyrosine recombinase XerD cofit 29 77
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19035 integrase no data 30 58
  Bacteroides thetaiotaomicron VPI-5482 BT2742 integrase, site-specific recombinase (NCBI ptt file) insig. 29 55
  Sinorhizobium meliloti 1021 SMc00691 site-specific tyrosine recombinase XerD sig. 28 97
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS10220 site-specific tyrosine recombinase XerD insig. 27 73
  Rhodospirillum rubrum S1H Rru_A3738 Phage integrase (NCBI) no data 31 84
  Bacteroides thetaiotaomicron VPI-5482 BT2635 putative integrase/recombinase (NCBI ptt file) insig. 39 26
  Bifidobacterium breve UCC2003 BBR_RS11760 integrase insig. 40 24
  Dickeya dianthicola 67-19 HGI48_RS20045 tyrosine recombinase XerC strong 27 91
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS17800 tyrosine-type recombinase/integrase insig. 27 66
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1809 tyrosine recombinase XerD insig. 27 84
  Dickeya dadantii 3937 DDA3937_RS19890 tyrosine recombinase XerC no data 27 91
  Dickeya dianthicola ME23 DZA65_RS21090 tyrosine recombinase XerC insig. 27 91
  Ralstonia solanacearum PSI07 RPSI07_RS12160 site-specific tyrosine recombinase XerD insig. 30 76
  Burkholderia phytofirmans PsJN BPHYT_RS01135 integrase insig. 28 79
  Pseudomonas syringae pv. syringae B728a Psyr_1286 tyrosine recombinase XerD subunit sig. 28 81
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1286 tyrosine recombinase XerD subunit sig. 28 81
  Dinoroseobacter shibae DFL-12 Dshi_1611 integrase family protein (RefSeq) strong 29 85
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09445 tyrosine-type recombinase/integrase sig. 27 79
  Mycobacterium tuberculosis H37Rv Rv1701 Probable integrase/recombinase sig. 31 73
  Pseudomonas segetis P6 ACVTMO_RS07795 xerD site-specific tyrosine recombinase XerD strong 31 74
  Magnetospirillum magneticum AMB-1 AMB_RS19880 site-specific tyrosine recombinase XerD cofit 28 90
  Rhizobium sp. OAE497 ABIE40_RS17685 site-specific tyrosine recombinase XerD sig. 30 77
  Pseudomonas sp. SVBP6 COO64_RS04910 xerD site-specific tyrosine recombinase XerD sig. 29 74
  Pseudomonas aeruginosa MRSN321 DY961_RS14280 xerD;go_function=site-specific site-specific tyrosine recombinase XerD insig. 31 71
  Pseudomonas aeruginosa PA14 IKLFDK_19085 site-specific tyrosine recombinase XerD no data 31 71
  Pseudomonas aeruginosa PUPa3 DQ20_RS42845 xerD;go_function=site-specific site-specific tyrosine recombinase XerD insig. 31 71
  Bacteroides stercoris CC31F HMPREF1181_RS00625 tyrosine recombinase XerC cofit 29 54
  Variovorax sp. OAS795 ABID97_RS20265 site-specific tyrosine recombinase XerD insig. 28 87
  Variovorax sp. SCN45 GFF2772 Site-specific tyrosine recombinase XerD strong 27 88
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS05140 site-specific tyrosine recombinase XerD insig. 28 77
  Ralstonia solanacearum UW163 UW163_RS08485 site-specific tyrosine recombinase XerD insig. 28 77
  Ralstonia solanacearum GMI1000 RS_RS12755 tyrosine recombinase XerD no data 29 76
  Bifidobacterium breve UCC2003 BBR_RS16755 site-specific tyrosine recombinase XerD strong 29 76
  Pseudomonas orientalis W4I3 QF045_RS25085 site-specific tyrosine recombinase XerD cofit 29 74
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04729 Tyrosine recombinase XerD cofit 28 74
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_00850 site-specific tyrosine recombinase XerD no data 24 90
  Pseudomonas fluorescens SBW25 PFLU_RS24560 site-specific tyrosine recombinase XerD sig. 29 74
  Pseudomonas fluorescens SBW25-INTG PFLU_RS24560 site-specific tyrosine recombinase XerD strong 29 74
  Pseudomonas simiae WCS417 PS417_22895 tyrosine recombinase XerD strong 29 74
  Azospirillum brasilense Sp245 AZOBR_RS03240 recombinase XerD insig. 28 80
  Herbaspirillum seropedicae SmR1 HSERO_RS04265 tyrosine recombinase XerD insig. 30 64
  Alteromonas macleodii MIT1002 MIT1002_00786 Tyrosine recombinase XerD insig. 27 74
  Escherichia coli ECRC62 BNILDI_04985 xerC tyrosine recombinase XerC insig. 26 93
  Kangiella aquimarina DSM 16071 B158DRAFT_0342 integron integrase insig. 27 64
  Escherichia coli ECOR27 NOLOHH_06550 xerC tyrosine recombinase XerC insig. 26 93
  Escherichia coli ECOR38 HEPCGN_13125 xerC tyrosine recombinase XerC cofit 26 93
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04239 Tyrosine recombinase XerC insig. 26 93
  Escherichia coli Nissle 1917 ECOLIN_RS21875 tyrosine recombinase XerC strong 26 93
  Escherichia coli BW25113 b3811 xerC site-specific tyrosine recombinase XerC (NCBI) strong 26 93
  Desulfovibrio vulgaris Hildenborough JW710 DVU2066 xerC site-specific recombinase, phage integrase family (TIGR) sig. 33 54
  Pseudomonas fluorescens FW300-N2E3 AO353_04365 recombinase XerD strong 28 78
  Escherichia coli BL21 ECD_03687 site-specific tyrosine recombinase sig. 26 93
  Shewanella loihica PV-4 Shew_0770 tyrosine recombinase XerD (RefSeq) strong 29 73
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1721 Tyrosine recombinase XerD strong 28 74
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3270 Site-specific recombinase XerD insig. 28 60
  Escherichia fergusonii Becca EFB2_04826 Tyrosine recombinase XerC strong 26 93
  Pseudomonas sp. S08-1 OH686_17750 tyrosine recombinase XerD insig. 30 76
  Phocaeicola dorei CL03T12C01 ABI39_RS03835 tyrosine-type recombinase/integrase no data 25 84
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS04705 site-specific tyrosine recombinase XerD strong 25 84
  Escherichia coli ECRC100 OKFHMN_14420 xerC tyrosine recombinase XerC insig. 25 93
  Escherichia coli ECRC101 MCAODC_04925 xerC tyrosine recombinase XerC no data 25 93
  Escherichia coli ECRC102 NIAGMN_12175 xerC tyrosine recombinase XerC no data 25 93
  Escherichia coli ECRC98 JDDGAC_18045 xerC tyrosine recombinase XerC no data 25 93
  Escherichia coli ECRC99 KEDOAH_13730 xerC tyrosine recombinase XerC no data 25 93
  Klebsiella michiganensis M5al BWI76_RS23545 tyrosine recombinase insig. 27 59
  Pseudomonas sp. BP01 JOY50_RS11700 xerD site-specific tyrosine recombinase XerD insig. 27 74
  Pseudomonas putida KT2440 PP_1468 Tyrosine recombinase XerD strong 27 74
  Rhodopseudomonas palustris CGA009 TX73_002625 site-specific tyrosine recombinase XerD sig. 30 76
  Pseudomonas fluorescens FW300-N2C3 AO356_06385 recombinase XerD strong 29 71
  Pseudomonas sp. DMC3 GFF1987 Tyrosine recombinase XerD insig. 28 74
  Pseudomonas sp. RS175 PFR28_00331 Tyrosine recombinase XerD strong 27 74
  Pseudomonas stutzeri RCH2 Psest_3129 tyrosine recombinase XerD insig. 29 74
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3011 Tyrosine recombinase XerD insig. 28 74
  Bacteroides ovatus ATCC 8483 BACOVA_02123 tyrosine recombinase XerD strong 23 83
  Sphingobium sp. HT1-2 GFF251 Site-specific tyrosine recombinase XerC cofit 32 73
  Klebsiella michiganensis M5al BWI76_RS23550 tyrosine recombinase insig. 29 52
  Kangiella aquimarina DSM 16071 B158DRAFT_2265 tyrosine recombinase XerD strong 25 84