Homologs of GFF549 from Xanthobacter sp. DMC5

hypothetical protein
SEED: RNA polymerase sigma-70 factor, ECF subfamily
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

79 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthobacter sp. DMC5 GFF549 hypothetical protein insig. 100 100
o Rhodopseudomonas palustris CGA009 TX73_005700 RNA polymerase sigma factor insig. 73 97
o Rhizobium sp. OAE497 ABIE40_RS13680 RNA polymerase sigma factor insig. 66 98
o Sinorhizobium meliloti 1021 SMc01150 hypothetical protein insig. 69 97
  Caulobacter crescentus NA1000 CCNA_01390 RNA polymerase sigma factor insig. 70 98
  Caulobacter crescentus NA1000 Δfur CCNA_01390 RNA polymerase sigma factor insig. 70 98
  Rhizobium sp. OAE497 ABIE40_RS05880 RNA polymerase sigma factor insig. 46 93
o Pseudomonas fluorescens FW300-N2E3 AO353_03200 RNA polymerase subunit sigma-24 insig. 45 92
o Pseudomonas sp. DMC3 GFF5258 hypothetical protein cofit 46 94
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3399 RNA polymerase sigma-70 factor, ECF subfamily insig. 46 93
  Rhizobium sp. OAE497 ABIE40_RS18175 RNA polymerase sigma factor cofit 43 94
o Pseudomonas orientalis W4I3 QF045_RS24050 RNA polymerase sigma factor insig. 44 94
o Pseudomonas sp. S08-1 OH686_16765 RNA polymerase ECF-type sigma factor cofit 47 90
o Pseudomonas fluorescens SBW25 PFLU_RS23540 RNA polymerase sigma factor insig. 44 94
o Pseudomonas fluorescens SBW25-INTG PFLU_RS23540 RNA polymerase sigma factor insig. 44 94
o Lysobacter sp. OAE881 ABIE51_RS14880 RNA polymerase sigma factor insig. 46 91
o Pseudomonas putida KT2440 PP_4553 RNA polymerase sigma-70 factor, ECF subfamily insig. 46 94
o Pseudomonas stutzeri RCH2 Psest_4133 RNA polymerase sigma factor, sigma-70 family sig. 47 96
o Pseudomonas lactucae CFBP13502 GEMAOFIL_04525 hypothetical protein cofit 44 94
o Pseudomonas sp. RS175 PFR28_00603 hypothetical protein insig. 45 94
o Pseudomonas aeruginosa PUPa3 DQ20_RS53230 RNA polymerase sigma factor insig. 46 85
o Pseudomonas fluorescens FW300-N2C3 AO356_05020 RNA polymerase subunit sigma-24 insig. 45 94
o Variovorax sp. SCN45 GFF3935 RNA polymerase ECF-type sigma factor insig. 44 91
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS19755 RNA polymerase sigma factor insig. 47 91
o Pseudomonas sp. BP01 JOY50_RS01330 RNA polymerase sigma factor insig. 45 94
o Pseudomonas aeruginosa MRSN321 DY961_RS19105 RNA polymerase sigma factor insig. 45 85
o Pseudomonas aeruginosa PA14 IKLFDK_06430 RNA polymerase subunit sigma-24 insig. 46 85
o Pseudomonas simiae WCS417 PS417_21945 RNA polymerase subunit sigma-24 insig. 44 94
o Acidovorax sp. GW101-3H11 Ac3H11_5010 RNA polymerase sigma-70 factor, ECF subfamily insig. 45 91
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2854 RNA polymerase sigma-70 factor, ECF subfamily insig. 45 94
o Pseudomonas segetis P6 MPMX49_03647 hypothetical protein insig. 47 86
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF454 RNA polymerase sigma-70 factor, ECF subfamily insig. 45 92
o Rhodanobacter denitrificans MT42 LRK55_RS01915 RNA polymerase sigma factor cofit 46 93
o Paraburkholderia sabiae LMG 24235 QEN71_RS16225 RNA polymerase sigma factor insig. 44 92
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3970 Predicted RNA polymerase sigma factor containing a TPR repeat domain insig. 43 95
o Cupriavidus basilensis FW507-4G11 RR42_RS26775 RNA polymerase subunit sigma-24 insig. 43 92
o Pseudomonas sp. SVBP6 COO64_RS22035 RNA polymerase sigma factor insig. 46 92
o Ralstonia sp. UNC404CL21Col ABZR87_RS21130 RNA polymerase sigma factor insig. 46 86
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS07860 RNA polymerase sigma factor insig. 46 90
o Burkholderia phytofirmans PsJN BPHYT_RS35225 RNA polymerase subunit sigma-24 insig. 44 92
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS02165 RNA polymerase sigma factor insig. 46 93
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03679 RNA polymerase, sigma subunit, ECF family insig. 44 92
o Ralstonia solanacearum GMI1000 RS_RS20165 RNA polymerase subunit sigma-24 insig. 46 91
o Rhodanobacter sp. FW510-T8 OKGIIK_09210 RNA polymerase subunit sigma-24 insig. 45 93
o Variovorax sp. OAS795 ABID97_RS08675 RNA polymerase sigma factor insig. 43 91
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4799.1 RNA polymerase sigma-70 factor, ECF subfamily insig. 40 94
o Paraburkholderia graminis OAS925 ABIE53_004579 RNA polymerase sigma factor (sigma-70 family) insig. 45 87
  Burkholderia phytofirmans PsJN BPHYT_RS31175 RNA polymerase sigma70 factor insig. 39 84
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4295 Predicted RNA polymerase sigma factor containing a TPR repeat domain insig. 31 95
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1935 RNA polymerase sigma-70 factor, ECF subfamily insig. 48 59
  Paraburkholderia sabiae LMG 24235 QEN71_RS33360 sigma factor insig. 39 84
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS15535 DNA-directed RNA polymerase sigma-70 factor insig. 41 87
o Bosea sp. OAE506 ABIE41_RS09620 DUF6596 domain-containing protein insig. 38 85
  Variovorax sp. OAS795 ABID97_RS20345 DUF6596 domain-containing protein insig. 36 83
  Variovorax sp. SCN45 GFF4791 RNA polymerase ECF-type sigma factor insig. 35 88
  Caulobacter crescentus NA1000 CCNA_00393 RNA polymerase sigma factor insig. 41 71
  Caulobacter crescentus NA1000 Δfur CCNA_00393 RNA polymerase sigma factor cofit 41 71
  Rhodanobacter denitrificans MT42 LRK55_RS15255 sigma factor insig. 42 87
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS12320 RNA polymerase sigma factor insig. 33 80
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4599 RNA polymerase sigma-70 factor, ECF subfamily insig. 33 94
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1936 RNA polymerase sigma-70 factor, ECF subfamily insig. 40 33
  Pseudomonas stutzeri RCH2 Psest_3456 RNA polymerase sigma factor, sigma-70 family insig. 33 33
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0726 RNA polymerase sigma factor, sigma-70 family insig. 31 34
  Kangiella aquimarina DSM 16071 B158DRAFT_0139 RNA polymerase sigma factor, sigma-70 family insig. 29 35
  Variovorax sp. SCN45 GFF2440 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 32 34
  Xanthobacter sp. DMC5 GFF393 Beta-barrel assembly-enhancing protease insig. 30 50
  Bacteroides stercoris CC31F HMPREF1181_RS02545 sigma-70 family RNA polymerase sigma factor insig. 29 37
  Synechococcus elongatus PCC 7942 Synpcc7942_1923 sigG RNA polymerase sigma factor RpoE strong 27 33
  Rhizobium sp. OAE497 ABIE40_RS15675 sigma-70 family RNA polymerase sigma factor insig. 31 36
  Kangiella aquimarina DSM 16071 B158DRAFT_2180 RNA polymerase, sigma-24 subunit, RpoE strong 29 37
  Shewanella sp. ANA-3 Shewana3_3152 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) cofit 29 34
  Burkholderia phytofirmans PsJN BPHYT_RS08240 RNA polymerase subunit sigma-24 sig. 29 40
  Variovorax sp. SCN45 GFF215 RNA polymerase sigma-54 factor RpoN insig. 27 36
  Rhodopseudomonas palustris CGA009 TX73_024905 sigma-70 family RNA polymerase sigma factor insig. 27 35
  Rahnella sp. WP5 EX31_RS18905 sigma-70 family RNA polymerase sigma factor insig. 28 37
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS08045 sigma-70 family RNA polymerase sigma factor cofit 26 40
  Sphingobium sp. HT1-2 GFF4485 RNA polymerase sigma factor cnrH cofit 39 20
  Agrobacterium fabrum C58 Atu1982 sigma factor insig. 31 32
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01538 RNA polymerase sigma-70 factor, ECF subfamily insig. 29 33