Homologs of PS417_28005 from Pseudomonas simiae WCS417

integration host factor
KEGG: DNA-binding protein HU-alpha

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
o Pseudomonas fluorescens SBW25 PFLU_RS29695 HU family DNA-binding protein no data 100 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS29695 HU family DNA-binding protein no data 100 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_00069 DNA-binding protein HU-beta cofit 100 100
  Pseudomonas simiae WCS417 PS417_28005 integration host factor no data 100 100
o Pseudomonas sp. DMC3 GFF464 DNA-binding protein HU-beta insig. 99 99
o Pseudomonas sp. SVBP6 COO64_RS01640 HU family DNA-binding protein insig. 99 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2051 DNA-binding protein HU-alpha no data 99 99
o Pseudomonas sp. RS175 PFR28_04473 DNA-binding protein HU-beta sig. 99 99
o Pseudomonas orientalis W4I3 QF045_RS02370 HU family DNA-binding protein cofit 98 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_769 DNA-binding protein HU-alpha insig. 98 99
o Pseudomonas fluorescens FW300-N2E3 AO353_09825 integration host factor no data 98 99
o Pseudomonas fluorescens FW300-N2C3 AO356_10970 integration host factor no data 98 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4059 DNA-binding protein HU-alpha insig. 97 99
o Pseudomonas segetis P6 ACVTMO_RS00495 HU family DNA-binding protein insig. 94 99
o Pseudomonas aeruginosa MRSN321 DY961_RS12630 HU family DNA-binding protein sig. 92 99
o Pseudomonas aeruginosa PUPa3 DQ20_RS49495 HU family DNA-binding protein strong 92 99
o Pseudomonas sp. S08-1 OH686_13485 DNA-binding protein HU no data 94 99
o Pseudomonas syringae pv. syringae B728a Psyr_5027 bacterial nucleoid protein HU alpha subunit no data 92 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_5027 bacterial nucleoid protein HU alpha subunit insig. 92 99
o Pseudomonas aeruginosa PA14 IKLFDK_26715 DNA-binding protein HU-alpha no data 92 99
o Pseudomonas stutzeri RCH2 Psest_3833 Bacterial nucleoid DNA-binding protein no data 89 99
o Pseudomonas putida KT2440 PP_5313 DNA-binding protein HU-alpha strong 84 100
o Pseudomonas sp. BP01 JOY50_RS08930 HU family DNA-binding protein insig. 81 99
  Pseudomonas aeruginosa MRSN321 DY961_RS20745 hupB;inference=COORDINATES nucleoid-associated protein HU-beta no data 59 99
  Pseudomonas aeruginosa PA14 IKLFDK_08765 DNA-binding protein HU-beta no data 59 99
  Pseudomonas aeruginosa PUPa3 DQ20_RS54825 hupB;inference=COORDINATES nucleoid-associated protein HU-beta no data 59 99
  Pseudomonas sp. S08-1 OH686_03630 DNA-binding protein HU-beta no data 59 99
o Marinobacter adhaerens HP15 HP15_3504 histone-like bacterial DNA-binding protein insig. 56 98
  Pseudomonas stutzeri RCH2 Psest_2284 Bacterial nucleoid DNA-binding protein no data 58 99
  Marinobacter adhaerens HP15 HP15_2182 histone-like bacterial DNA-binding protein no data 57 98
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4045.1 DNA-binding protein HU-beta no data 56 99
  Pseudomonas putida KT2440 PP_2303 DNA binding regulator, beta subunit B no data 56 99
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07315 HU family DNA-binding protein no data 57 99
  Pseudomonas sp. BP01 JOY50_RS25900 HU family DNA-binding protein no data 53 99
  Acinetobacter radioresistens SK82 MPMX26_01331 DNA-binding protein HU-beta no data 56 98
  Lysobacter sp. OAE881 ABIE51_RS14140 HU family DNA-binding protein no data 53 99
  Rhodanobacter denitrificans MT42 LRK55_RS16465 HU family DNA-binding protein no data 54 99
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS16740 HU family DNA-binding protein cofit 54 99
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS12130 HU family DNA-binding protein no data 54 99
  Rhodanobacter sp. FW510-T8 OKGIIK_08025 himA integration host factor subunit alpha no data 54 99
  Vibrio cholerae E7946 ATCC 55056 CSW01_01405 DNA-binding protein HU-alpha cofit 56 98
  Pseudomonas fluorescens SBW25 PFLU_RS19155 HU family DNA-binding protein no data 56 99
  Pseudomonas fluorescens SBW25-INTG PFLU_RS19155 HU family DNA-binding protein no data 56 99
  Pseudomonas orientalis W4I3 QF045_RS18885 HU family DNA-binding protein no data 56 99
  Pseudomonas simiae WCS417 PS417_17220 transcriptional regulator HU subunit alpha no data 56 99
  Lysobacter sp. OAE881 ABIE51_RS05120 HU family DNA-binding protein no data 53 98
  Acinetobacter baumannii LAC-4 RR41_RS12365 HU family DNA-binding protein no data 54 98
  Kangiella aquimarina DSM 16071 B158DRAFT_1039 Bacterial nucleoid DNA-binding protein strong 52 99
  Pseudomonas sp. SVBP6 COO64_RS19210 HU family DNA-binding protein insig. 54 99
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5425 DNA-binding protein HU-beta insig. 52 99
  Shewanella loihica PV-4 Shew_2505 histone family protein DNA-binding protein (RefSeq) no data 51 99
  Dickeya dadantii 3937 DDA3937_RS01205 DNA-binding protein HU-alpha no data 55 98
  Pantoea sp. MT58 IAI47_18055 DNA-binding protein HU-alpha strong 55 98
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS22590 DNA-binding protein HU-alpha no data 55 98
  Burkholderia phytofirmans PsJN BPHYT_RS09465 transcriptional regulator insig. 51 99
  Dickeya dianthicola 67-19 HGI48_RS01200 DNA-binding protein HU-alpha no data 55 98
  Dickeya dianthicola ME23 DZA65_RS01245 DNA-binding protein HU-alpha no data 55 98
  Pseudomonas sp. DMC3 GFF1446 DNA-binding protein HU-beta no data 54 99
  Pseudomonas syringae pv. syringae B728a Psyr_1750 bacterial nucleoid protein HU beta subunit no data 54 99
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1750 bacterial nucleoid protein HU beta subunit no data 54 99
  Serratia liquefaciens MT49 IAI46_05025 DNA-binding protein HU-beta sig. 51 99
  Klebsiella pneumoniae MKP103 KDGMDA_10070 DNA-binding protein HU-alpha strong 54 98
  Paraburkholderia sabiae LMG 24235 QEN71_RS21970 HU family DNA-binding protein insig. 52 99
  Vibrio cholerae E7946 ATCC 55056 CSW01_09600 DNA-binding protein HU-beta cofit 50 99
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_10915 hupA DNA-binding protein HU-alpha cofit 54 98
  Erwinia tracheiphila SCR3 LU632_RS01000 hupA DNA-binding protein HU-alpha strong 54 98
  Erwinia amylovora T8 OLJFJH_06770 DNA-binding protein HU-alpha no data 54 98
  Klebsiella michiganensis M5al BWI76_RS01585 transcriptional regulator strong 54 98
  Rahnella sp. WP5 EX31_RS16845 DNA-binding protein HU-alpha cofit 54 98
  Rahnella sp. WP5 EX31_RS22260 DNA-binding protein HU-beta insig. 52 99
  Variovorax sp. OAS795 ABID97_RS23580 HU family DNA-binding protein no data 51 100
  Serratia liquefaciens MT49 IAI46_01350 DNA-binding protein HU-alpha strong 54 98
  Pectobacterium carotovorum WPP14 HER17_RS20350 DNA-binding protein HU-alpha strong 54 98
  Escherichia coli ECOR38 HEPCGN_11980 hupA DNA-binding protein HU-alpha strong 54 98
  Enterobacter asburiae PDN3 EX28DRAFT_4542 Bacterial nucleoid DNA-binding protein strong 54 98
  Enterobacter sp. TBS_079 MPMX20_00223 DNA-binding protein HU-alpha strong 54 98
  Alteromonas macleodii MIT1002 MIT1002_02756 hypothetical protein no data 50 99
  Shewanella oneidensis MR-1 SO1797 DNA-binding protein, HU family (NCBI ptt file) no data 51 99
  Sphingobium sp. HT1-2 GFF1673 DNA-binding protein HU-beta cofit 51 99
  Escherichia coli BL21 ECD_03877 HU, DNA-binding transcriptional regulator, alpha subunit sig. 54 98
  Escherichia fergusonii Becca EFB2_04611 DNA-binding protein HU-alpha cofit 54 98
  Escherichia coli ECOR27 NOLOHH_05490 hupA DNA-binding protein HU-alpha insig. 54 98
  Escherichia coli ECRC100 OKFHMN_13345 hupA DNA-binding protein HU-alpha strong 54 98
  Escherichia coli ECRC101 MCAODC_03845 hupA DNA-binding protein HU-alpha strong 54 98
  Escherichia coli ECRC102 NIAGMN_11095 hupA DNA-binding protein HU-alpha cofit 54 98
  Escherichia coli ECRC62 BNILDI_06035 hupA DNA-binding protein HU-alpha cofit 54 98
  Escherichia coli ECRC98 JDDGAC_16970 hupA DNA-binding protein HU-alpha insig. 54 98
  Escherichia coli ECRC99 KEDOAH_14815 hupA DNA-binding protein HU-alpha no data 54 98
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04050 DNA-binding protein HU-alpha strong 54 98
  Escherichia coli Nissle 1917 ECOLIN_RS23070 nucleoid-associated protein HU-alpha strong 54 98
  Escherichia coli BW25113 b4000 hupA HU, DNA-binding transcriptional regulator, alpha subunit (NCBI) strong 54 98
  Dickeya dadantii 3937 DDA3937_RS05655 DNA-binding protein HU-beta insig. 50 99
  Dickeya dianthicola 67-19 HGI48_RS05700 DNA-binding protein HU-beta insig. 50 99
  Dickeya dianthicola ME23 DZA65_RS06025 DNA-binding protein HU-beta insig. 50 99
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00899 bacterial nucleoid protein Hbs no data 51 99
  Paraburkholderia graminis OAS925 ABIE53_002118 DNA-binding protein HU-beta sig. 51 99
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2555 DNA-binding protein HU-beta no data 53 99
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3948 DNA-binding protein HU-beta no data 53 99
  Pseudomonas fluorescens FW300-N2E3 AO353_20190 DNA-binding protein HU no data 53 99
  Pseudomonas fluorescens FW300-N2C3 AO356_01735 DNA-binding protein HU no data 53 99