Homologs of GFF5194 from Variovorax sp. SCN45

L-arabinose ABC transporter, substrate-binding protein AraF
SEED: L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2)
KEGG: putative multiple sugar transport system substrate-binding protein

173 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF5194 L-arabinose ABC transporter, substrate-binding protein AraF insig. 100 100
o Variovorax sp. OAS795 ABID97_RS06840 multiple monosaccharide ABC transporter substrate-binding protein strong 94 100
o Acidovorax sp. GW101-3H11 Ac3H11_610 L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2) strong 82 100
o Herbaspirillum seropedicae SmR1 HSERO_RS05190 sugar ABC transporter substrate-binding protein strong 79 99
o Azospirillum sp. SherDot2 MPMX19_06224 Multiple sugar-binding periplasmic protein SbpA insig. 78 100
o Rhizobium sp. OAE497 ABIE40_RS13950 multiple monosaccharide ABC transporter substrate-binding protein cofit 78 97
o Azospirillum brasilense Sp245 AZOBR_RS31240 sugar ABC transporter substrate-binding protein insig. 77 99
o Sinorhizobium meliloti 1021 SM_b20895 sugar uptake ABC transporter substrate-binding protein precursor strong 74 99
o Agrobacterium fabrum C58 Atu2348 sugar binding protein strong 76 97
o Pseudomonas sp. BP01 JOY50_RS07825 chvE multiple monosaccharide ABC transporter substrate-binding protein insig. 57 99
  Dickeya dianthicola 67-19 HGI48_RS00315 D-xylose ABC transporter substrate-binding protein insig. 36 100
  Dickeya dianthicola ME23 DZA65_RS00315 D-xylose ABC transporter substrate-binding protein insig. 36 100
  Dickeya dadantii 3937 DDA3937_RS20930 D-xylose ABC transporter substrate-binding protein insig. 36 100
  Enterobacter sp. TBS_079 MPMX20_00164 D-xylose-binding periplasmic protein strong 37 88
  Enterobacter asburiae PDN3 EX28DRAFT_3831 D-xylose ABC transporter, substrate-binding protein insig. 37 88
  Pantoea sp. MT58 IAI47_00190 D-xylose ABC transporter substrate-binding protein insig. 37 88
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS00170 xylF D-xylose ABC transporter substrate-binding protein cofit 37 88
  Escherichia coli BW25113 b3566 xylF D-xylose transporter subunit (NCBI) strong 37 88
  Escherichia fergusonii Becca EFB2_00241 D-xylose-binding periplasmic protein insig. 37 88
  Escherichia coli ECOR27 NOLOHH_07895 xylF D-xylose ABC transporter substrate-binding protein insig. 37 88
  Escherichia coli ECOR38 HEPCGN_14835 xylF D-xylose ABC transporter substrate-binding protein insig. 37 88
  Escherichia coli ECRC62 BNILDI_03650 xylF D-xylose ABC transporter substrate-binding protein insig. 37 88
  Escherichia coli Nissle 1917 ECOLIN_RS20395 D-xylose ABC transporter substrate-binding protein insig. 37 88
  Serratia liquefaciens MT49 IAI46_00285 D-xylose ABC transporter substrate-binding protein insig. 37 88
  Rahnella sp. WP5 EX31_RS09760 D-xylose ABC transporter substrate-binding protein insig. 37 88
  Escherichia coli ECRC100 OKFHMN_15950 xylF D-xylose ABC transporter substrate-binding protein cofit 37 88
  Escherichia coli ECRC101 MCAODC_06465 xylF D-xylose ABC transporter substrate-binding protein insig. 37 88
  Escherichia coli ECRC102 NIAGMN_13710 xylF D-xylose ABC transporter substrate-binding protein cofit 37 88
  Escherichia coli ECRC98 JDDGAC_19580 xylF D-xylose ABC transporter substrate-binding protein insig. 37 88
  Escherichia coli ECRC99 KEDOAH_12200 xylF D-xylose ABC transporter substrate-binding protein no data 37 88
  Pectobacterium carotovorum WPP14 HER17_RS21080 D-xylose ABC transporter substrate-binding protein insig. 37 88
  Escherichia coli BL21 ECD_03418 D-xylose transporter subunit insig. 37 88
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00138 D-xylose-binding periplasmic protein insig. 37 88
  Klebsiella pneumoniae MKP103 KDGMDA_07780 D-xylose ABC transporter substrate-binding protein insig. 36 88
  Klebsiella pneumoniae MRSN742743 KFA93_RS09390 xylF;go_process=D-xylose D-xylose ABC transporter substrate-binding protein insig. 36 88
  Klebsiella michiganensis M5al BWI76_RS27030 D-xylose transporter subunit XylF insig. 36 88
  Herbaspirillum seropedicae SmR1 HSERO_RS22460 xylose ABC transporter substrate-binding protein strong 32 98
  Burkholderia phytofirmans PsJN BPHYT_RS32820 xylose ABC transporter substrate-binding protein strong 32 99
  Paraburkholderia graminis OAS925 ABIE53_004930 D-xylose transport system substrate-binding protein strong 32 99
  Paraburkholderia sabiae LMG 24235 QEN71_RS25870 D-xylose ABC transporter substrate-binding protein cofit 33 100
  Ralstonia sp. UNC404CL21Col ABZR87_RS18220 D-xylose ABC transporter substrate-binding protein sig. 32 99
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03877 xylose-binding protein insig. 32 99
  Ralstonia solanacearum GMI1000 RS_RS24945 D-xylose ABC transporter substrate-binding protein strong 33 94
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS14420 D-xylose ABC transporter substrate-binding protein insig. 32 100
  Variovorax sp. SCN45 GFF5603 D-xylose ABC transporter, substrate-binding protein XylF cofit 33 98
  Sinorhizobium meliloti 1021 SM_b20902 sugar uptake ABC transporter substrate-binding protein precursor strong 33 91
  Variovorax sp. OAS795 ABID97_RS01175 D-xylose ABC transporter substrate-binding protein strong 31 98
  Ralstonia sp. UNC404CL21Col ABZR87_RS23215 D-xylose ABC transporter substrate-binding protein strong 32 93
  Rhizobium sp. OAE497 ABIE40_RS14020 D-xylose ABC transporter substrate-binding protein strong 32 91
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS23505 D-xylose ABC transporter substrate-binding protein no data 32 94
  Ralstonia solanacearum PSI07 RPSI07_RS07635 D-xylose ABC transporter substrate-binding protein sig. 32 94
  Ralstonia solanacearum UW163 UW163_RS16755 D-xylose ABC transporter substrate-binding protein strong 32 94
  Pseudomonas orientalis W4I3 QF045_RS13260 D-xylose ABC transporter substrate-binding protein insig. 31 88
  Pseudomonas simiae WCS417 PS417_10940 sugar ABC transporter substrate-binding protein insig. 31 88
  Pseudomonas fluorescens SBW25 PFLU_RS11300 D-xylose ABC transporter substrate-binding protein insig. 31 87
  Pseudomonas fluorescens SBW25-INTG PFLU_RS11300 D-xylose ABC transporter substrate-binding protein insig. 31 87
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02457 D-xylose-binding periplasmic protein cofit 31 88
  Pseudomonas sp. DMC3 GFF1156 D-xylose-binding periplasmic protein insig. 31 88
  Pseudomonas sp. RS175 PFR28_02349 D-xylose-binding periplasmic protein cofit 31 88
  Pseudomonas fluorescens FW300-N2C3 AO356_28505 sugar ABC transporter substrate-binding protein sig. 30 88
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1455 Xylose ABC transporter, periplasmic xylose-binding protein XylF insig. 30 88
  Pseudomonas syringae pv. syringae B728a Psyr_2884 xylose-binding protein insig. 30 88
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2884 xylose-binding protein insig. 30 88
  Phaeobacter inhibens DSM 17395 PGA1_262p00430 glucose transporter, periplasmic substrate-binding component (from data) strong 30 96
  Dinoroseobacter shibae DFL-12 Dshi_2000 xylitol ABC transporter, periplasmic substrate-binding protein (from data) strong 31 76
  Agrobacterium fabrum C58 Atu3576 xylose ABC transporter substrate-binding protein sig. 32 98
  Azospirillum sp. SherDot2 MPMX19_03028 D-xylose-binding periplasmic protein insig. 31 89
  Rhizobium sp. OAE497 ABIE40_RS24360 sugar ABC transporter substrate-binding protein insig. 27 99
  Pantoea sp. MT58 IAI47_11815 D-ribose ABC transporter substrate-binding protein insig. 27 85
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS11860 D-ribose ABC transporter substrate-binding protein insig. 27 85
  Vibrio cholerae E7946 ATCC 55056 CSW01_06690 galactose/glucose ABC transporter substrate-binding protein MglB cofit 24 70
  Variovorax sp. OAS795 ABID97_RS25535 sugar ABC transporter substrate-binding protein sig. 29 54
  Fusobacterium nucleatum SB010 HUW76_06565 galactose/glucose ABC transporter substrate-binding protein MglB strong 24 76
  Paraburkholderia graminis OAS925 ABIE53_002621 ribose transport system substrate-binding protein insig. 30 62
  Pectobacterium carotovorum WPP14 HER17_RS09335 D-ribose ABC transporter substrate-binding protein cofit 26 71
  Rahnella sp. WP5 EX31_RS18685 galactose/glucose ABC transporter substrate-binding protein MglB insig. 25 71
  Pantoea sp. MT58 IAI47_06735 galactose/glucose ABC transporter substrate-binding protein MglB insig. 26 67
  Klebsiella michiganensis M5al BWI76_RS19645 galactose ABC transporter substrate-binding protein sig. 25 72
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS15440 rhizopine-binding protein insig. 25 74
  Ralstonia solanacearum UW163 UW163_RS12900 rhizopine-binding protein insig. 25 74
  Dickeya dianthicola 67-19 HGI48_RS06055 galactose/glucose ABC transporter substrate-binding protein MglB insig. 26 72
  Ralstonia solanacearum PSI07 RPSI07_RS17915 rhizopine-binding protein insig. 23 68
  Serratia liquefaciens MT49 IAI46_07915 galactose/glucose ABC transporter substrate-binding protein MglB insig. 26 67
  Dickeya dianthicola ME23 DZA65_RS06400 galactose/glucose ABC transporter substrate-binding protein MglB insig. 26 67
  Variovorax sp. SCN45 GFF2611 Fructose ABC transporter, substrate-binding component FrcB cofit 29 55
  Dickeya dadantii 3937 DDA3937_RS06010 galactose/glucose ABC transporter substrate-binding protein MglB insig. 26 67
  Sinorhizobium meliloti 1021 SM_b21377 sugar uptake ABC transporter substrate-binding protein precursor strong 28 42
  Paraburkholderia sabiae LMG 24235 QEN71_RS13090 sugar ABC transporter substrate-binding protein sig. 30 44
  Rahnella sp. WP5 EX31_RS02860 sugar ABC transporter substrate-binding protein insig. 32 32
  Pseudomonas fluorescens SBW25 PFLU_RS12620 sugar ABC transporter substrate-binding protein insig. 24 80
  Pseudomonas fluorescens SBW25-INTG PFLU_RS12620 sugar ABC transporter substrate-binding protein strong 24 80
  Bacteroides ovatus ATCC 8483 BACOVA_04496 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein strong 24 68
  Paraburkholderia sabiae LMG 24235 QEN71_RS36065 sugar ABC transporter substrate-binding protein insig. 23 87
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3788 Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) insig. 26 72
  Sinorhizobium meliloti 1021 SM_b20349 sugar ABC transporter insig. 25 63
  Rhizobium sp. OAE497 ABIE40_RS24670 D-ribose ABC transporter substrate-binding protein insig. 24 78
  Rhizobium sp. OAE497 ABIE40_RS22800 sugar ABC transporter substrate-binding protein insig. 22 72
  Escherichia fergusonii Becca EFB2_01706 D-galactose-binding periplasmic protein insig. 25 67
  Escherichia coli ECOR27 NOLOHH_15105 mglB galactose/glucose ABC transporter substrate-binding protein MglB insig. 25 67
  Escherichia coli ECOR38 HEPCGN_22800 mglB galactose/glucose ABC transporter substrate-binding protein MglB insig. 25 67
  Escherichia coli ECRC100 OKFHMN_23530 mglB galactose/glucose ABC transporter substrate-binding protein MglB cofit 25 67
  Escherichia coli ECRC101 MCAODC_14580 mglB galactose/glucose ABC transporter substrate-binding protein MglB insig. 25 67
  Escherichia coli ECRC102 NIAGMN_21295 mglB galactose/glucose ABC transporter substrate-binding protein MglB insig. 25 67
  Escherichia coli ECRC62 BNILDI_14025 mglB galactose/glucose ABC transporter substrate-binding protein MglB insig. 25 67
  Escherichia coli ECRC98 JDDGAC_27490 mglB galactose/glucose ABC transporter substrate-binding protein MglB insig. 25 67
  Escherichia coli ECRC99 KEDOAH_04655 mglB galactose/glucose ABC transporter substrate-binding protein MglB no data 25 67
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01561 D-galactose-binding periplasmic protein insig. 25 67
  Escherichia coli Nissle 1917 ECOLIN_RS12580 galactose/glucose ABC transporter substrate-binding protein MglB no data 25 67
  Escherichia coli BW25113 b2150 mglB methyl-galactoside transporter subunit (NCBI) strong 25 67
  Klebsiella pneumoniae MKP103 KDGMDA_26610 galactose/glucose ABC transporter substrate-binding protein MglB insig. 23 72
  Klebsiella pneumoniae MRSN742743 KFA93_RS06535 mglB;go_function=carbohydrate galactose/glucose ABC transporter substrate-binding protein MglB insig. 23 72
  Variovorax sp. OAS795 ABID97_RS19775 sugar ABC transporter substrate-binding protein sig. 29 44
  Enterobacter asburiae PDN3 EX28DRAFT_0407 ABC-type sugar transport system, periplasmic component insig. 25 80
  Burkholderia phytofirmans PsJN BPHYT_RS22745 sugar ABC transporter no data 30 44
  Paraburkholderia graminis OAS925 ABIE53_004065 fructose transport system substrate-binding protein insig. 29 44
  Sinorhizobium meliloti 1021 SM_b20712 rhizopine uptake ABC transporter substrate-binding protein precursor strong 25 89
  Enterobacter sp. TBS_079 MPMX20_03120 D-galactose-binding periplasmic protein sig. 25 80
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03226 mannose-binding protein /fructose-binding protein /ribose-binding protein insig. 29 44
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1005 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) insig. 23 53
  Bacteroides thetaiotaomicron VPI-5482 BT1754 two-component system sensor histidine kinase/response regulator, hybrid ('one component system') (NCBI ptt file) strong 23 70
  Pseudomonas orientalis W4I3 QF045_RS14620 sugar ABC transporter substrate-binding protein insig. 24 80
  Vibrio cholerae E7946 ATCC 55056 CSW01_14660 ribose ABC transporter substrate-binding protein RbsB insig. 24 85
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS07105 mglB galactose/glucose ABC transporter substrate-binding protein MglB cofit 27 67
  Burkholderia phytofirmans PsJN BPHYT_RS04695 ABC transporter substrate-binding protein insig. 24 70
  Pseudomonas fluorescens FW300-N2E3 AO353_21380 rhizopine-binding protein strong 22 78
  Pseudomonas syringae pv. syringae B728a Psyr_3265 monosaccharide ABC transporter substrate-binding protein, CUT2 family insig. 25 65
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3265 monosaccharide ABC transporter substrate-binding protein, CUT2 family insig. 25 65
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF197 Ribose ABC transporter, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) insig. 28 64
  Phocaeicola dorei CL03T12C01 ABI39_RS08240 substrate-binding domain-containing protein strong 26 52
  Sinorhizobium meliloti 1021 SM_b20856 sugar uptake ABC transporter substrate-binding protein precursor insig. 24 86
  Ralstonia solanacearum GMI1000 RS_RS06220 rhizopine-binding protein no data 22 81
  Herbaspirillum seropedicae SmR1 HSERO_RS05095 LacI family transcription regulator strong 28 40
  Sinorhizobium meliloti 1021 SMc02338 periplasmic binding ABC transporter protein insig. 26 34
  Erwinia amylovora T8 OLJFJH_05405 ribose ABC transporter substrate-binding protein RbsB insig. 24 74
  Sinorhizobium meliloti 1021 SMc02171 periplasmic binding ABC transporter protein strong 28 42
  Azospirillum sp. SherDot2 MPMX19_03868 Xylitol-binding protein insig. 27 37
  Pseudomonas sp. BP01 JOY50_RS04270 sugar ABC transporter substrate-binding protein insig. 25 81
  Rhizobium sp. OAE497 ABIE40_RS22845 sugar ABC transporter substrate-binding protein cofit 25 75
  Pseudomonas simiae WCS417 PS417_13645 ABC transporter insig. 29 44
  Klebsiella pneumoniae MKP103 KDGMDA_15520 rhizopine-binding protein insig. 21 68
  Klebsiella pneumoniae MRSN742743 KFA93_RS03090 sugar ABC transporter substrate-binding protein insig. 21 68
  Pseudomonas fluorescens SBW25 PFLU_RS15200 ABC transporter substrate-binding protein insig. 29 39
  Pseudomonas fluorescens SBW25-INTG PFLU_RS15200 ABC transporter substrate-binding protein sig. 29 39
  Paraburkholderia graminis OAS925 ABIE53_006102 erythritol transport system substrate-binding protein insig. 23 86
  Pseudomonas putida KT2440 PP_2454 ribose ABC transporter, periplasmic ribose-binding subunit insig. 35 26
  Phaeobacter inhibens DSM 17395 PGA1_c28060 putative sugar transport system, periplasmic protein strong 28 40
  Pantoea sp. MT58 IAI47_11145 D-ribose ABC transporter substrate-binding protein insig. 27 69
  Rhizobium sp. OAE497 ABIE40_RS24755 D-ribose ABC transporter substrate-binding protein insig. 25 68
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS07720 sugar ABC transporter substrate-binding protein strong 22 68
  Azospirillum sp. SherDot2 MPMX19_03379 Periplasmic protein TorT insig. 29 27
  Sinorhizobium meliloti 1021 SM_b20072 rhizopine binding protein insig. 22 80
  Pantoea sp. MT58 IAI47_07555 sugar ABC transporter substrate-binding protein insig. 21 73
  Pseudomonas aeruginosa MRSN321 DY961_RS28745 sugar ABC transporter substrate-binding protein insig. 32 41
  Pseudomonas aeruginosa PA14 IKLFDK_09500 D-ribose/D-allose-binding protein no data 32 41
  Pseudomonas aeruginosa PUPa3 DQ20_RS38230 sugar ABC transporter substrate-binding protein sig. 32 41
  Pectobacterium carotovorum WPP14 HER17_RS01020 ABC transporter substrate-binding protein cofit 28 67
  Dickeya dadantii 3937 DDA3937_RS02175 D-ribose ABC transporter substrate-binding protein insig. 24 64
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05950 monosaccharide ABC transporter substrate-binding protein, CUT2 family insig. 24 62
  Paraburkholderia graminis OAS925 ABIE53_001220 ribose transport system substrate-binding protein insig. 25 73
  Paraburkholderia sabiae LMG 24235 QEN71_RS35730 substrate-binding domain-containing protein insig. 29 32
  Agrobacterium fabrum C58 Atu3487 sugar ABC transporter substrate-binding protein strong 28 45
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00106 monosaccharide ABC transporter substrate-binding protein, CUT2 family insig. 25 73
  Dickeya dadantii 3937 DDA3937_RS03705 substrate-binding domain-containing protein insig. 23 83
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02705 monosaccharide ABC transporter substrate-binding protein, CUT2 family insig. 22 76
  Klebsiella michiganensis M5al BWI76_RS07235 hypothetical protein insig. 21 68
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03087 D-threitol-binding protein cofit 28 42
  Pseudomonas orientalis W4I3 QF045_RS16375 ABC transporter substrate-binding protein insig. 28 42
  Rhizobium sp. OAE497 ABIE40_RS29565 ABC transporter substrate-binding protein insig. 31 15
  Acidovorax sp. GW101-3H11 Ac3H11_3035 Fructose ABC transporter, substrate-binding component FrcB (from data) strong 32 21
  Paraburkholderia sabiae LMG 24235 QEN71_RS25290 substrate-binding domain-containing protein insig. 25 68
  Dickeya dianthicola 67-19 HGI48_RS03745 substrate-binding domain-containing protein insig. 22 77
  Rhizobium sp. OAE497 ABIE40_RS02080 sugar ABC transporter substrate-binding protein strong 34 24
  Enterobacter sp. TBS_079 MPMX20_03372 Ribose import binding protein RbsB sig. 23 64