Homologs of GFF5194 from Variovorax sp. SCN45

L-arabinose ABC transporter, substrate-binding protein AraF
SEED: L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2)
KEGG: putative multiple sugar transport system substrate-binding protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF5194 L-arabinose ABC transporter, substrate-binding protein AraF insig. 100 100
o Variovorax sp. OAS795 ABID97_RS06840 multiple monosaccharide ABC transporter substrate-binding protein strong 94 100
o Acidovorax sp. GW101-3H11 Ac3H11_610 L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2) strong 82 100
o Herbaspirillum seropedicae SmR1 HSERO_RS05190 sugar ABC transporter substrate-binding protein strong 79 99
o Azospirillum sp. SherDot2 MPMX19_06224 Multiple sugar-binding periplasmic protein SbpA insig. 78 100
o Rhizobium sp. OAE497 ABIE40_RS13950 multiple monosaccharide ABC transporter substrate-binding protein cofit 78 97
o Azospirillum brasilense Sp245 AZOBR_RS31240 sugar ABC transporter substrate-binding protein insig. 77 99
o Sinorhizobium meliloti 1021 SM_b20895 sugar uptake ABC transporter substrate-binding protein precursor strong 74 99
o Agrobacterium fabrum C58 Atu2348 sugar binding protein strong 76 97
o Pseudomonas sp. BP01 JOY50_RS07825 chvE multiple monosaccharide ABC transporter substrate-binding protein insig. 57 99
  Dickeya dianthicola 67-19 HGI48_RS00315 D-xylose ABC transporter substrate-binding protein insig. 36 100
  Dickeya dianthicola ME23 DZA65_RS00315 D-xylose ABC transporter substrate-binding protein insig. 36 100
  Dickeya dadantii 3937 DDA3937_RS20930 D-xylose ABC transporter substrate-binding protein insig. 36 100
  Enterobacter sp. TBS_079 MPMX20_00164 D-xylose-binding periplasmic protein strong 37 88
  Enterobacter asburiae PDN3 EX28DRAFT_3831 D-xylose ABC transporter, substrate-binding protein insig. 37 88
  Pantoea sp. MT58 IAI47_00190 D-xylose ABC transporter substrate-binding protein insig. 37 88
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS19150 D-xylose ABC transporter substrate-binding protein cofit 37 88
  Escherichia coli BW25113 b3566 xylF D-xylose transporter subunit (NCBI) strong 37 88
  Escherichia fergusonii Becca EFB2_00241 D-xylose-binding periplasmic protein insig. 37 88
  Escherichia coli ECOR27 NOLOHH_07895 xylF D-xylose ABC transporter substrate-binding protein insig. 37 88
  Escherichia coli ECOR38 HEPCGN_14835 xylF D-xylose ABC transporter substrate-binding protein insig. 37 88
  Escherichia coli ECRC62 BNILDI_03650 xylF D-xylose ABC transporter substrate-binding protein insig. 37 88
  Escherichia coli Nissle 1917 ECOLIN_RS20395 D-xylose ABC transporter substrate-binding protein insig. 37 88
  Serratia liquefaciens MT49 IAI46_00285 D-xylose ABC transporter substrate-binding protein insig. 37 88
  Rahnella sp. WP5 EX31_RS09760 D-xylose ABC transporter substrate-binding protein insig. 37 88
  Escherichia coli ECRC100 OKFHMN_15950 xylF D-xylose ABC transporter substrate-binding protein cofit 37 88
  Escherichia coli ECRC101 MCAODC_06465 xylF D-xylose ABC transporter substrate-binding protein insig. 37 88
  Escherichia coli ECRC102 NIAGMN_13710 xylF D-xylose ABC transporter substrate-binding protein cofit 37 88
  Escherichia coli ECRC98 JDDGAC_19580 xylF D-xylose ABC transporter substrate-binding protein insig. 37 88
  Escherichia coli ECRC99 KEDOAH_12200 xylF D-xylose ABC transporter substrate-binding protein no data 37 88
  Pectobacterium carotovorum WPP14 HER17_RS21080 D-xylose ABC transporter substrate-binding protein insig. 37 88
  Escherichia coli BL21 ECD_03418 D-xylose transporter subunit insig. 37 88
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00138 D-xylose-binding periplasmic protein insig. 37 88
  Klebsiella pneumoniae MKP103 KDGMDA_07780 D-xylose ABC transporter substrate-binding protein insig. 36 88
  Klebsiella pneumoniae MRSN742743 KFA93_RS09390 xylF;go_process=D-xylose D-xylose ABC transporter substrate-binding protein insig. 36 88
  Klebsiella michiganensis M5al BWI76_RS27030 D-xylose transporter subunit XylF insig. 36 88
  Herbaspirillum seropedicae SmR1 HSERO_RS22460 xylose ABC transporter substrate-binding protein strong 32 98
  Burkholderia phytofirmans PsJN BPHYT_RS32820 xylose ABC transporter substrate-binding protein strong 32 99
  Paraburkholderia graminis OAS925 ABIE53_004930 D-xylose transport system substrate-binding protein strong 32 99
  Paraburkholderia sabiae LMG 24235 QEN71_RS25870 D-xylose ABC transporter substrate-binding protein cofit 33 100
  Ralstonia sp. UNC404CL21Col ABZR87_RS18220 D-xylose ABC transporter substrate-binding protein sig. 32 99
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03877 xylose-binding protein insig. 32 99
  Ralstonia solanacearum GMI1000 RS_RS24945 D-xylose ABC transporter substrate-binding protein strong 33 94
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS14420 D-xylose ABC transporter substrate-binding protein insig. 32 100
  Variovorax sp. SCN45 GFF5603 D-xylose ABC transporter, substrate-binding protein XylF cofit 33 98
  Sinorhizobium meliloti 1021 SM_b20902 sugar uptake ABC transporter substrate-binding protein precursor strong 33 91
  Variovorax sp. OAS795 ABID97_RS01175 D-xylose ABC transporter substrate-binding protein strong 31 98
  Ralstonia sp. UNC404CL21Col ABZR87_RS23215 D-xylose ABC transporter substrate-binding protein strong 32 93
  Rhizobium sp. OAE497 ABIE40_RS14020 D-xylose ABC transporter substrate-binding protein strong 32 91
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS23505 D-xylose ABC transporter substrate-binding protein no data 32 94
  Ralstonia solanacearum UW163 UW163_RS16755 D-xylose ABC transporter substrate-binding protein strong 32 94
  Ralstonia solanacearum PSI07 RPSI07_RS07635 D-xylose ABC transporter substrate-binding protein sig. 32 94
  Pseudomonas orientalis W4I3 QF045_RS13260 D-xylose ABC transporter substrate-binding protein insig. 31 88
  Pseudomonas simiae WCS417 PS417_10940 sugar ABC transporter substrate-binding protein insig. 31 88
  Pseudomonas fluorescens SBW25 PFLU_RS11300 D-xylose ABC transporter substrate-binding protein insig. 31 87
  Pseudomonas fluorescens SBW25-INTG PFLU_RS11300 D-xylose ABC transporter substrate-binding protein insig. 31 87
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02457 D-xylose-binding periplasmic protein cofit 31 88
  Pseudomonas sp. DMC3 GFF1156 D-xylose-binding periplasmic protein insig. 31 88
  Pseudomonas sp. RS175 PFR28_02349 D-xylose-binding periplasmic protein cofit 31 88
  Pseudomonas fluorescens FW300-N2C3 AO356_28505 sugar ABC transporter substrate-binding protein sig. 30 88
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1455 Xylose ABC transporter, periplasmic xylose-binding protein XylF insig. 30 88
  Pseudomonas syringae pv. syringae B728a Psyr_2884 xylose-binding protein insig. 30 88
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2884 xylose-binding protein insig. 30 88
  Phaeobacter inhibens DSM 17395 PGA1_262p00430 glucose transporter, periplasmic substrate-binding component (from data) strong 30 96
  Dinoroseobacter shibae DFL-12 Dshi_2000 xylitol ABC transporter, periplasmic substrate-binding protein (from data) strong 31 76
  Agrobacterium fabrum C58 Atu3576 xylose ABC transporter substrate-binding protein sig. 32 98
  Azospirillum sp. SherDot2 MPMX19_03028 D-xylose-binding periplasmic protein insig. 31 89
  Rhizobium sp. OAE497 ABIE40_RS24360 sugar ABC transporter substrate-binding protein insig. 27 99
  Pantoea sp. MT58 IAI47_11815 D-ribose ABC transporter substrate-binding protein insig. 27 85
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS19575 D-ribose ABC transporter substrate-binding protein cofit 27 85
  Vibrio cholerae E7946 ATCC 55056 CSW01_06690 galactose/glucose ABC transporter substrate-binding protein MglB cofit 24 70
  Variovorax sp. OAS795 ABID97_RS25535 sugar ABC transporter substrate-binding protein sig. 29 54
  Fusobacterium nucleatum SB010 HUW76_06565 galactose/glucose ABC transporter substrate-binding protein MglB strong 24 76
  Paraburkholderia graminis OAS925 ABIE53_002621 ribose transport system substrate-binding protein insig. 30 62
  Pectobacterium carotovorum WPP14 HER17_RS09335 D-ribose ABC transporter substrate-binding protein cofit 26 71
  Rahnella sp. WP5 EX31_RS18685 galactose/glucose ABC transporter substrate-binding protein MglB insig. 25 71
  Pantoea sp. MT58 IAI47_06735 galactose/glucose ABC transporter substrate-binding protein MglB insig. 26 67
  Klebsiella michiganensis M5al BWI76_RS19645 galactose ABC transporter substrate-binding protein sig. 25 72
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS15440 rhizopine-binding protein insig. 25 74
  Ralstonia solanacearum UW163 UW163_RS12900 rhizopine-binding protein insig. 25 74
  Dickeya dianthicola 67-19 HGI48_RS06055 galactose/glucose ABC transporter substrate-binding protein MglB insig. 26 72
  Ralstonia solanacearum PSI07 RPSI07_RS17915 rhizopine-binding protein insig. 23 68
  Serratia liquefaciens MT49 IAI46_07915 galactose/glucose ABC transporter substrate-binding protein MglB insig. 26 67
  Dickeya dianthicola ME23 DZA65_RS06400 galactose/glucose ABC transporter substrate-binding protein MglB insig. 26 67
  Variovorax sp. SCN45 GFF2611 Fructose ABC transporter, substrate-binding component FrcB cofit 29 55
  Dickeya dadantii 3937 DDA3937_RS06010 galactose/glucose ABC transporter substrate-binding protein MglB insig. 26 67
  Sinorhizobium meliloti 1021 SM_b21377 sugar uptake ABC transporter substrate-binding protein precursor strong 28 42
  Paraburkholderia sabiae LMG 24235 QEN71_RS13090 sugar ABC transporter substrate-binding protein sig. 30 44
  Rahnella sp. WP5 EX31_RS02860 sugar ABC transporter substrate-binding protein insig. 32 32
  Pseudomonas fluorescens SBW25 PFLU_RS12620 sugar ABC transporter substrate-binding protein insig. 24 80
  Pseudomonas fluorescens SBW25-INTG PFLU_RS12620 sugar ABC transporter substrate-binding protein strong 24 80
  Bacteroides ovatus ATCC 8483 BACOVA_04496 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein strong 24 68
  Paraburkholderia sabiae LMG 24235 QEN71_RS36065 sugar ABC transporter substrate-binding protein insig. 23 87
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3788 Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) insig. 26 72
  Sinorhizobium meliloti 1021 SM_b20349 sugar ABC transporter insig. 25 63
  Rhizobium sp. OAE497 ABIE40_RS24670 D-ribose ABC transporter substrate-binding protein insig. 24 78
  Rhizobium sp. OAE497 ABIE40_RS22800 sugar ABC transporter substrate-binding protein insig. 22 72
  Escherichia fergusonii Becca EFB2_01706 D-galactose-binding periplasmic protein insig. 25 67
  Escherichia coli ECOR27 NOLOHH_15105 mglB galactose/glucose ABC transporter substrate-binding protein MglB insig. 25 67
  Escherichia coli ECOR38 HEPCGN_22800 mglB galactose/glucose ABC transporter substrate-binding protein MglB insig. 25 67