Homologs of GFF4583 from Variovorax sp. SCN45

TRAP-type C4-dicarboxylate transport system, large permease component
SEED: TRAP-type C4-dicarboxylate transport system, large permease component

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF4583 TRAP-type C4-dicarboxylate transport system, large permease component cofit 100 100
o Variovorax sp. OAS795 ABID97_RS05965 TRAP transporter large permease insig. 97 100
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF704 TRAP-type C4-dicarboxylate transport system, large permease component insig. 88 97
o Cupriavidus basilensis FW507-4G11 RR42_RS06530 C4-dicarboxylate ABC transporter insig. 80 100
o Acidovorax sp. GW101-3H11 Ac3H11_1950 TRAP-type C4-dicarboxylate transport system, large permease component insig. 82 100
o Castellaniella sp019104865 MT123 ABCV34_RS12225 TRAP transporter large permease insig. 72 100
o Azospirillum brasilense Sp245 AZOBR_RS02725 C4-dicarboxylate ABC transporter insig. 64 100
  Azospirillum brasilense Sp245 AZOBR_RS25415 C4-dicarboxylate ABC transporter insig. 66 96
o Azospirillum sp. SherDot2 MPMX19_06069 C4-dicarboxylate TRAP transporter large permease protein DctM cofit 62 100
o Dechlorosoma suillum PS Dsui_2534 TRAP transporter, DctM subunit cofit 58 99
o Desulfovibrio vulgaris Hildenborough JW710 DVU0705 dctM TRAP dicarboxylate transporter, putative (TIGR) insig. 55 99
o Rhodospirillum rubrum S1H Rru_A2237 TRAP dicarboxylate transporter, DctM subunit (NCBI) insig. 57 100
o Pseudomonas segetis P6 ACVTMO_RS03910 TRAP transporter large permease insig. 48 99
  Sinorhizobium meliloti 1021 SM_b21436 C4-dicarboxylate transport system, permease large protein transmembrane insig. 36 97
  Pseudomonas stutzeri RCH2 Psest_4270 TRAP transporter, DctM subunit strong 39 99
  Acidovorax sp. GW101-3H11 Ac3H11_163 TRAP-type C4-dicarboxylate transport system, large permease component insig. 36 96
  Pseudomonas sp. RS175 PFR28_00121 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 37 99
  Variovorax sp. SCN45 GFF6470 TRAP-type C4-dicarboxylate transport system, large permease component insig. 36 89
  Pseudomonas sp. DMC3 GFF1144 C4-dicarboxylate TRAP transporter large permease protein DctM cofit 38 91
  Cellulophaga baltica 18 M666_RS19730 TRAP transporter large permease subunit insig. 35 98
  Pseudomonas segetis P6 ACVTMO_RS21740 dctM C4-dicarboxylate TRAP transporter large permease protein DctM insig. 38 99
  Pseudomonas segetis P6 ACVTMO_RS12030 dctM C4-dicarboxylate TRAP transporter large permease protein DctM no data 37 99
  Azospirillum brasilense Sp245 AZOBR_RS09595 C4-dicarboxylate ABC transporter permease sig. 34 99
  Enterobacter sp. TBS_079 MPMX20_04347 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 34 99
  Desulfovibrio vulgaris Miyazaki F DvMF_1931 TRAP dicarboxylate transporter, DctM subunit (RefSeq) insig. 37 98
  Pseudomonas aeruginosa PUPa3 DQ20_RS50405 dctM;inference=COORDINATES C4-dicarboxylate TRAP transporter large permease protein DctM insig. 37 97
  Pseudomonas aeruginosa MRSN321 DY961_RS11695 dctM;inference=COORDINATES C4-dicarboxylate TRAP transporter large permease protein DctM insig. 37 97
  Pseudomonas aeruginosa PA14 IKLFDK_27640 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 37 97
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2273 Predicted rhamnogalacturonide-specific TRAP-type transporter, large transmembrane component RhiC insig. 35 98
  Dechlorosoma suillum PS Dsui_3153 TRAP transporter, DctM subunit sig. 34 99
  Rhodospirillum rubrum S1H Rru_A3676 TRAP dicarboxylate transporter, DctM subunit (NCBI) strong 35 99
  Castellaniella sp019104865 MT123 ABCV34_RS12260 TRAP transporter large permease insig. 36 93
  Sinorhizobium meliloti 1021 SM_b20444 hypothetical protein insig. 33 98
  Desulfovibrio vulgaris Hildenborough JW710 DVU2823 dctM TRAP dicarboxylate transporter family protein (TIGR) insig. 37 98
  Pantoea sp. MT58 IAI47_03220 TRAP transporter large permease insig. 36 90
  Variovorax sp. OAS795 ABID97_RS19635 TRAP transporter large permease insig. 35 96
  Pseudomonas orientalis W4I3 QF045_RS19040 TRAP transporter large permease insig. 34 99
  Dinoroseobacter shibae DFL-12 Dshi_1832 TRAP dicarboxylate transporter, DctM subunit (RefSeq) sig. 33 97
  Vibrio cholerae E7946 ATCC 55056 CSW01_09640 C4-dicarboxylate ABC transporter permease insig. 36 99
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS16475 TRAP transporter large permease cofit 35 90
  Escherichia coli Nissle 1917 ECOLIN_RS17390 TRAP transporter large permease subunit insig. 39 98
  Pseudomonas fluorescens FW300-N2C3 AO356_23045 hypothetical protein insig. 35 99
  Rhizobium sp. OAE497 ABIE40_RS25810 TRAP transporter large permease insig. 32 97
  Desulfovibrio vulgaris Miyazaki F DvMF_2137 TRAP dicarboxylate transporter, DctM subunit (RefSeq) cofit 38 99
  Acidovorax sp. GW101-3H11 Ac3H11_3955 TRAP-type C4-dicarboxylate transport system, large permease component insig. 37 98
  Magnetospirillum magneticum AMB-1 AMB_RS04550 C4-dicarboxylate ABC transporter permease insig. 33 99
  Pseudomonas segetis P6 ACVTMO_RS17850 TRAP transporter large permease insig. 32 99
  Rhodopseudomonas palustris CGA009 TX73_010560 TRAP transporter large permease subunit strong 33 99
  Pseudomonas putida KT2440 PP_1167 D-glucuronate / D-galacturonate TRAP transporter, large permease component (from data) strong 36 99
  Castellaniella sp019104865 MT123 ABCV34_RS07855 TRAP transporter large permease insig. 35 98
  Cupriavidus basilensis FW507-4G11 RR42_RS34990 ABC transporter permease insig. 32 99
  Pseudomonas segetis P6 ACVTMO_RS20185 TRAP transporter large permease insig. 33 99
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_485 TRAP-type C4-dicarboxylate transport system, large permease component insig. 35 87
  Bosea sp. OAE506 ABIE41_RS23665 TRAP transporter large permease insig. 32 98
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3132 TRAP-type C4-dicarboxylate transport system, large permease component insig. 39 98
  Rahnella sp. WP5 EX31_RS08020 TRAP transporter large permease insig. 34 99
  Azospirillum sp. SherDot2 MPMX19_06063 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 36 99
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03837 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 37 99
  Pseudomonas syringae pv. syringae B728a Psyr_0898 TRAP dicarboxylate transporter, DctM subunit insig. 35 99
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0898 TRAP dicarboxylate transporter, DctM subunit insig. 35 99
  Pseudomonas sp. BP01 JOY50_RS02045 TRAP transporter large permease insig. 36 99
  Bosea sp. OAE506 ABIE41_RS18670 TRAP transporter large permease insig. 36 97
  Pseudomonas sp. RS175 PFR28_02440 C4-dicarboxylate TRAP transporter large permease protein DctM strong 35 87
  Herbaspirillum seropedicae SmR1 HSERO_RS04250 C4-dicarboxylate ABC transporter permease sig. 34 99
  Escherichia coli ECRC62 BNILDI_07135 TRAP transporter large permease cofit 37 99
  Sinorhizobium meliloti 1021 SM_b20297 permease insig. 36 98
  Pseudomonas segetis P6 ACVTMO_RS12165 TRAP transporter large permease insig. 37 95
  Pseudomonas stutzeri RCH2 Psest_0361 TRAP transporter, DctM subunit insig. 36 98
  Xanthobacter sp. DMC5 GFF431 Sialic acid TRAP transporter large permease protein SiaM insig. 33 99
  Pectobacterium carotovorum WPP14 HER17_RS19685 TRAP transporter large permease cofit 34 99
  Pseudomonas sp. DMC3 GFF1614 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 34 99
  Pseudomonas fluorescens SBW25 PFLU_RS19305 TRAP transporter large permease insig. 34 99
  Pseudomonas fluorescens SBW25-INTG PFLU_RS19305 TRAP transporter large permease insig. 34 99
  Klebsiella michiganensis M5al BWI76_RS24135 c4-dicarboxylate permease insig. 33 100
  Acidovorax sp. GW101-3H11 Ac3H11_3227 gluconate TRAP transporter, large permease component (from data) strong 33 96
  Pseudomonas aeruginosa MRSN321 DY961_RS08040 dctM;inference=COORDINATES C4-dicarboxylate TRAP transporter large permease protein DctM sig. 37 96
  Pseudomonas aeruginosa PA14 IKLFDK_03935 C4-dicarboxylate TRAP transporter large permease protein DctM sig. 37 96
  Pseudomonas aeruginosa PUPa3 DQ20_RS44760 dctM;inference=COORDINATES C4-dicarboxylate TRAP transporter large permease protein DctM strong 37 96
  Agrobacterium fabrum C58 Atu2743 hypothetical protein insig. 35 95
  Pseudomonas simiae WCS417 PS417_17380 membrane protein insig. 35 99
  Pseudomonas simiae WCS417 PS417_14900 C4-dicarboxylate ABC transporter permease insig. 37 96
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03770 C4-dicarboxylate TRAP transporter large permease protein DctM no data 34 99
  Bosea sp. OAE506 ABIE41_RS03210 TRAP transporter large permease insig. 31 99
  Agrobacterium fabrum C58 Atu3135 ABC transporter permease strong 33 98
  Bosea sp. OAE506 ABIE41_RS24150 TRAP transporter large permease subunit insig. 36 95
  Alteromonas macleodii MIT1002 MIT1002_02428 Neu5Ac permease insig. 35 99
  Pseudomonas fluorescens SBW25 PFLU_RS16920 TRAP transporter large permease insig. 37 96
  Pseudomonas fluorescens SBW25-INTG PFLU_RS16920 TRAP transporter large permease strong 37 96
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5506 TRAP-type C4-dicarboxylate transport system, large permease component insig. 35 97
  Azospirillum brasilense Sp245 AZOBR_RS26625 dehydroascorbate transporter insig. 34 95
  Bosea sp. OAE506 ABIE41_RS07820 TRAP transporter large permease insig. 34 98
  Dinoroseobacter shibae DFL-12 Dshi_2753 TRAP dicarboxylate transporter, DctM subunit (RefSeq) insig. 37 91
  Azospirillum sp. SherDot2 MPMX19_00661 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 32 100
  Shewanella oneidensis MR-1 SO3136 dctM C4-dicarboxylate transport protein (NCBI ptt file) insig. 31 99
  Escherichia coli ECOR27 NOLOHH_11090 dctQ Tripartite ATP-independent periplasmic transporter, DctM component insig. 34 100
  Xanthobacter sp. DMC5 GFF2559 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 33 98
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF174 TRAP-type C4-dicarboxylate transport system, large permease component no data 35 100
  Agrobacterium fabrum C58 Atu3255 dicarboxylate ABC transporter permease insig. 33 89
  Shewanella sp. ANA-3 Shewana3_1414 TRAP dicarboxylate transporter, DctM subunit (RefSeq) strong 31 99
  Bosea sp. OAE506 ABIE41_RS08865 TRAP transporter large permease insig. 35 96