Homologs of GFF4545 from Variovorax sp. SCN45

Transcriptional regulator, AraC family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF4545 Transcriptional regulator, AraC family insig. 100 100
o Cupriavidus basilensis FW507-4G11 RR42_RS35075 AraC family transcriptional regulator insig. 84 100
o Pseudomonas aeruginosa PA14 IKLFDK_02670 AraC family transcriptional regulator sig. 65 95
o Pseudomonas aeruginosa MRSN321 DY961_RS25065 helix-turn-helix transcriptional regulator sig. 65 95
o Pseudomonas aeruginosa PUPa3 DQ20_RS57520 helix-turn-helix transcriptional regulator sig. 65 95
o Pseudomonas sp. SVBP6 COO64_RS18105 helix-turn-helix transcriptional regulator insig. 62 96
o Pseudomonas fluorescens SBW25 PFLU_RS02820 AraC family transcriptional regulator insig. 60 94
o Pseudomonas fluorescens SBW25-INTG PFLU_RS02820 AraC family transcriptional regulator insig. 60 94
o Pseudomonas sp. DMC3 GFF3270 HTH-type transcriptional regulator NimR cofit 62 93
o Pseudomonas simiae WCS417 PS417_02760 AraC family transcriptional regulator insig. 60 94
o Pseudomonas orientalis W4I3 QF045_RS05795 helix-turn-helix transcriptional regulator insig. 60 94
o Pseudomonas fluorescens FW300-N2E3 AO353_13450 AraC family transcriptional regulator insig. 60 93
o Pseudomonas fluorescens GW456-L13 PfGW456L13_100 Transcriptional regulator, AraC family insig. 58 97
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1362 Transcriptional regulator, AraC family insig. 60 93
o Pseudomonas sp. BP01 JOY50_RS17460 helix-turn-helix transcriptional regulator insig. 62 96
o Pseudomonas putida KT2440 PP_4852 Transcriptional regulator, AraC family sig. 61 96
o Serratia liquefaciens MT49 IAI46_17855 helix-turn-helix transcriptional regulator insig. 48 91
o Erwinia amylovora T8 OLJFJH_11225 AraC family transcriptional regulator insig. 45 99
o Rahnella sp. WP5 EX31_RS19615 helix-turn-helix transcriptional regulator insig. 44 93
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS00185 helix-turn-helix transcriptional regulator cofit 47 90
o Agrobacterium fabrum C58 Atu5338 AraC family transcriptional regulator no data 46 91
o Ralstonia sp. UNC404CL21Col ABZR87_RS23255 helix-turn-helix transcriptional regulator insig. 42 95
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS23475 AraC family transcriptional regulator insig. 42 92
o Ralstonia solanacearum UW163 UW163_RS16725 AraC family transcriptional regulator insig. 42 92
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_475 Transcriptional regulator, AraC family insig. 44 92
o Ralstonia solanacearum PSI07 RPSI07_RS07665 AraC family transcriptional regulator insig. 42 91
o Vibrio cholerae E7946 ATCC 55056 CSW01_18815 AraC family transcriptional regulator insig. 39 93
o Pseudomonas fluorescens FW300-N2C3 AO356_22960 AraC family transcriptional regulator insig. 43 92
o Ralstonia solanacearum GMI1000 RS_RS24975 AraC family transcriptional regulator insig. 42 92
o Shewanella sp. ANA-3 Shewana3_0925 AraC family transcriptional regulator (RefSeq) sig. 39 91
o Acinetobacter baumannii LAC-4 RR41_RS02400 helix-turn-helix transcriptional regulator insig. 39 91
o Shewanella oneidensis MR-1 SO1092 transcriptional regulator, AraC/XylS family (NCBI ptt file) insig. 39 91
  Serratia liquefaciens MT49 IAI46_02585 helix-turn-helix transcriptional regulator insig. 34 91
  Azospirillum brasilense Sp245 AZOBR_RS28585 AraC family transcriptional regulator insig. 37 83
  Pseudomonas stutzeri RCH2 Psest_4208 AraC-type DNA-binding domain-containing proteins insig. 37 92
  Pseudomonas sp. SVBP6 COO64_RS22605 AraC family transcriptional regulator insig. 39 94
  Pseudomonas segetis P6 ACVTMO_RS01750 AraC family transcriptional regulator insig. 32 94
  Enterobacter sp. TBS_079 MPMX20_01835 HTH-type transcriptional regulator NimR insig. 34 89
  Pseudomonas simiae WCS417 PS417_14805 AraC family transcriptional regulator insig. 35 84
  Pseudomonas aeruginosa MRSN321 DY961_RS19645 helix-turn-helix transcriptional regulator insig. 37 91
  Pseudomonas aeruginosa PA14 IKLFDK_07660 AraC family transcriptional regulator insig. 37 91
  Pseudomonas aeruginosa PUPa3 DQ20_RS53755 helix-turn-helix transcriptional regulator insig. 37 91
  Rhodospirillum rubrum S1H Rru_A1951 Transcriptional Regulator, AraC family (NCBI) insig. 37 83
  Pseudomonas sp. DMC3 GFF1786 HTH-type transcriptional regulator NimR insig. 34 94
  Pseudomonas sp. SVBP6 COO64_RS07745 helix-turn-helix domain-containing protein insig. 32 94
  Rhodopseudomonas palustris CGA009 TX73_014025 helix-turn-helix transcriptional regulator insig. 36 83
  Enterobacter sp. TBS_079 MPMX20_01145 HTH-type transcriptional regulator NimR insig. 36 85
  Pseudomonas aeruginosa MRSN321 DY961_RS06270 helix-turn-helix transcriptional regulator sig. 35 87
  Pseudomonas aeruginosa PA14 IKLFDK_05800 AraC family transcriptional regulator insig. 35 87
  Pseudomonas aeruginosa PUPa3 DQ20_RS46525 helix-turn-helix transcriptional regulator insig. 35 87
  Rhodospirillum rubrum S1H Rru_A2335 Transcriptional Regulator, AraC family (NCBI) cofit 34 92
  Enterobacter asburiae PDN3 EX28DRAFT_1780 AraC-type DNA-binding domain-containing proteins insig. 33 89
  Klebsiella michiganensis M5al BWI76_RS11455 AraC family transcriptional regulator insig. 33 91
  Enterobacter asburiae PDN3 EX28DRAFT_2415 AraC-type DNA-binding domain-containing proteins insig. 36 85
  Klebsiella michiganensis M5al BWI76_RS12940 AraC family transcriptional regulator insig. 35 83
  Pseudomonas fluorescens SBW25 PFLU_RS16815 helix-turn-helix transcriptional regulator insig. 34 84
  Pseudomonas fluorescens SBW25-INTG PFLU_RS16815 helix-turn-helix transcriptional regulator insig. 34 84
  Azospirillum brasilense Sp245 AZOBR_RS31815 AraC family transcriptional regulator insig. 37 83
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2138 transcriptional regulator, AraC family insig. 33 85
  Pseudomonas aeruginosa MRSN321 DY961_RS27100 helix-turn-helix transcriptional regulator sig. 33 91
  Pseudomonas aeruginosa PA14 IKLFDK_24730 AraC family transcriptional regulator sig. 33 91
  Pseudomonas aeruginosa PUPa3 DQ20_RS31630 helix-turn-helix transcriptional regulator sig. 33 91
  Rhodospirillum rubrum S1H Rru_A3128 Transcriptional Regulator, AraC family (NCBI) insig. 36 88
  Rhodopseudomonas palustris CGA009 TX73_016840 helix-turn-helix transcriptional regulator insig. 33 85
  Variovorax sp. SCN45 GFF1485 Transcriptional regulator, AraC family insig. 37 85
  Azospirillum sp. SherDot2 MPMX19_04533 HTH-type transcriptional regulator NimR insig. 35 83
  Pseudomonas fluorescens FW300-N2C3 AO356_29635 transcriptional regulator insig. 32 90
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02878 HTH-type transcriptional regulator NimR cofit 32 90
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06000 transcriptional regulator, AraC family insig. 35 92
  Pseudomonas orientalis W4I3 QF045_RS17905 helix-turn-helix transcriptional regulator insig. 33 94
  Azospirillum sp. SherDot2 MPMX19_06866 HTH-type transcriptional regulator NimR insig. 36 86
  Pseudomonas fluorescens FW300-N2C3 AO356_27415 AraC family transcriptional regulator insig. 31 94
  Paraburkholderia graminis OAS925 ABIE53_001863 AraC-like DNA-binding protein sig. 34 86
  Pseudomonas simiae WCS417 PS417_15525 AraC family transcriptional regulator insig. 34 84
  Pseudomonas simiae WCS417 PS417_16195 AraC family transcriptional regulator insig. 33 94
o Acinetobacter radioresistens SK82 MPMX26_00111 HTH-type transcriptional regulator NimR no data 33 90
  Pseudomonas fluorescens SBW25 PFLU_RS18225 helix-turn-helix transcriptional regulator insig. 32 94
  Pseudomonas fluorescens SBW25-INTG PFLU_RS18225 helix-turn-helix transcriptional regulator sig. 32 94
  Pseudomonas syringae pv. syringae B728a Psyr_0649 transcriptional regulator, AraC family insig. 33 92
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0649 transcriptional regulator, AraC family insig. 33 92
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03519 HTH-type transcriptional regulator NimR cofit 31 94
  Pseudomonas putida KT2440 PP_0583 Transcriptional regulator, AraC family insig. 34 94
  Klebsiella michiganensis M5al BWI76_RS21700 AraC family transcriptional regulator insig. 33 83
  Cupriavidus basilensis FW507-4G11 RR42_RS00395 AraC family transcriptional regulator insig. 32 91
  Klebsiella pneumoniae MKP103 KDGMDA_19080 AraC family transcriptional regulator insig. 34 91
  Rhodospirillum rubrum S1H Rru_A2490 Transcriptional Regulator, AraC family (NCBI) insig. 39 84
  Desulfovibrio vulgaris Miyazaki F DvMF_0808 transcriptional regulator, AraC family (RefSeq) insig. 33 94
  Acinetobacter baumannii LAC-4 RR41_RS18110 helix-turn-helix domain-containing protein insig. 32 91
  Pseudomonas sp. BP01 JOY50_RS23250 helix-turn-helix transcriptional regulator insig. 33 94
  Escherichia coli BL21 ECD_01759 putative DNA-binding transcriptional regulator no data 36 83
  Variovorax sp. OAS795 ABID97_RS28450 helix-turn-helix transcriptional regulator insig. 33 92
  Pseudomonas fluorescens SBW25 PFLU_RS17510 helix-turn-helix transcriptional regulator insig. 33 84
  Pseudomonas fluorescens SBW25-INTG PFLU_RS17510 helix-turn-helix transcriptional regulator insig. 33 84
  Escherichia coli ECOR27 NOLOHH_17210 nimR DNA-binding transcriptional regulator NimR insig. 35 83
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01943 HTH-type transcriptional regulator NimR insig. 35 83
  Escherichia coli ECRC62 BNILDI_15995 nimR DNA-binding transcriptional regulator NimR insig. 35 83
  Pseudomonas sp. SVBP6 COO64_RS24540 helix-turn-helix transcriptional regulator insig. 32 84
  Escherichia coli Nissle 1917 ECOLIN_RS09975 DNA-binding transcriptional regulator NimR insig. 35 83
  Rhodospirillum rubrum S1H Rru_A0140 Transcriptional Regulator, AraC family (NCBI) insig. 37 83
  Escherichia fergusonii Becca EFB2_02205 HTH-type transcriptional regulator NimR insig. 35 83