Homologs of PGA1_262p00500 from Phaeobacter inhibens DSM 17395

putative ATP dependent DNA ligase
SEED: ATP-dependent DNA ligase (EC 6.5.1.1) LigC
KEGG: DNA ligase (ATP)

Top 100 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Phaeobacter inhibens DSM 17395 PGA1_262p00500 putative ATP dependent DNA ligase insig. 100 100
o Rhizobium sp. OAE497 ABIE40_RS04635 cisplatin damage response ATP-dependent DNA ligase insig. 54 100
o Caulobacter crescentus NA1000 CCNA_03725 ATP-dependent DNA ligase cofit 55 100
o Caulobacter crescentus NA1000 Δfur CCNA_03725 ATP-dependent DNA ligase cofit 55 100
o Azospirillum brasilense Sp245 AZOBR_RS09960 ATP-dependent DNA ligase insig. 56 100
o Agrobacterium fabrum C58 Atu0840 ATP-dependent DNA ligase sig. 55 100
o Azospirillum sp. SherDot2 MPMX19_02215 DNA ligase insig. 56 100
o Sinorhizobium meliloti 1021 SMc03177 ATP-dependent DNA ligase insig. 54 100
o Bosea sp. OAE506 ABIE41_RS24090 cisplatin damage response ATP-dependent DNA ligase insig. 54 100
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04120 cisplatin damage response ATP-dependent DNA ligase insig. 53 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3851 DNA ligase, ATP-dependent, PP_1105 family insig. 51 99
o Alteromonas macleodii MIT1002 MIT1002_03768 Putative DNA ligase-like protein/MT0965 insig. 47 100
  Rhodopseudomonas palustris CGA009 TX73_004135 ATP-dependent DNA ligase insig. 53 85
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS21575 ATP-dependent DNA ligase insig. 41 100
o Dinoroseobacter shibae DFL-12 Dshi_2589 ATP dependent DNA ligase (RefSeq) strong 43 100
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS09095 ATP-dependent DNA ligase insig. 39 100
o Variovorax sp. OAS795 ABID97_RS00390 ATP-dependent DNA ligase insig. 40 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS21355 ATP-dependent DNA ligase insig. 39 100
o Variovorax sp. SCN45 GFF3697 ATP-dependent DNA ligase (EC 6.5.1.1) LigC insig. 41 100
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3656.1 ATP-dependent DNA ligase (EC 6.5.1.1) LigC insig. 40 100
o Pseudomonas simiae WCS417 PS417_06420 ATP-dependent DNA ligase insig. 39 100
o Pseudomonas fluorescens SBW25 PFLU_RS06485 ATP-dependent DNA ligase insig. 38 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS06485 ATP-dependent DNA ligase insig. 38 100
o Lysobacter sp. OAE881 ABIE51_RS03755 ATP-dependent DNA ligase insig. 41 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2957 ATP-dependent DNA ligase (EC 6.5.1.1) LigC insig. 37 100
o Pseudomonas fluorescens FW300-N2C3 AO356_05490 ATP-dependent DNA ligase insig. 37 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS20340 ATP-dependent DNA ligase insig. 38 100
o Pseudomonas putida KT2440 PP_1105 putative DNA ligase, ATP-dependent insig. 39 100
o Pseudomonas sp. RS175 PFR28_00508 DNA ligase insig. 37 100
o Burkholderia phytofirmans PsJN BPHYT_RS26300 ATP-dependent DNA ligase insig. 38 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02819 DNA ligase-1 insig. 38 100
o Pseudomonas syringae pv. syringae B728a Psyr_3873 ATP-dependent DNA ligase:ATP-dependent DNA ligase insig. 37 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3873 ATP-dependent DNA ligase:ATP-dependent DNA ligase insig. 37 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3180 ATP-dependent DNA ligase (EC 6.5.1.1) LigC insig. 36 100
o Pseudomonas sp. S08-1 OH686_06060 DNA ligase, ATP-dependent, family insig. 38 100
o Herbaspirillum seropedicae SmR1 HSERO_RS11395 ATP-dependent DNA ligase insig. 37 100
o Pseudomonas stutzeri RCH2 Psest_1648 ATP-dependent DNA ligase insig. 37 100
o Acidovorax sp. GW101-3H11 Ac3H11_4922 ATP-dependent DNA ligase (EC 6.5.1.1) LigC sig. 37 100
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1241 ATP-dependent DNA ligase (EC 6.5.1.1) LigC insig. 35 100
  Paraburkholderia graminis OAS925 ABIE53_005972 ATP-dependent DNA ligase sig. 46 41
  Methanococcus maripaludis JJ MMJJ_RS00110 ATP-dependent DNA ligase no data 28 79
  Methanococcus maripaludis S2 MMP_RS05025 ATP-dependent DNA ligase no data 27 79
  Mycobacterium tuberculosis H37Rv Rv3062 Probable ATP-dependent DNA ligase LigB (polydeoxyribonucleotide synthase [ATP]) (polynucleotide ligase [ATP]) (sealase) (DNA repair protein) (DNA joinase) insig. 34 62
  Rhodopseudomonas palustris CGA009 TX73_004135 ATP-dependent DNA ligase insig. 57 17
  Bosea sp. OAE506 ABIE41_RS06590 non-homologous end-joining DNA ligase insig. 30 54
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS06915 DNA ligase D insig. 27 57
  Agrobacterium fabrum C58 Atu5051 ATP-dependent DNA ligase insig. 29 57
  Agrobacterium fabrum C58 Atu5097 ATP-dependent DNA ligase insig. 27 57
  Pseudomonas sp. RS175 PFR28_02106 Multifunctional non-homologous end joining protein LigD insig. 28 61
  Paraburkholderia sabiae LMG 24235 QEN71_RS22145 DNA ligase D insig. 28 58
  Agrobacterium fabrum C58 Atu5055 ATP-dependent DNA ligase insig. 29 62
  Paraburkholderia graminis OAS925 ABIE53_000212 bifunctional non-homologous end joining protein LigD insig. 28 58
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS15285 DNA ligase D insig. 27 64
  Pseudomonas simiae WCS417 PS417_13125 ATP-dependent DNA ligase insig. 28 56
  Pseudomonas stutzeri RCH2 Psest_2179 DNA ligase D insig. 27 57
  Agrobacterium fabrum C58 Atu4632 ATP-dependent DNA ligase insig. 27 57
  Mycobacterium tuberculosis H37Rv Rv0938 ATP dependent DNA ligase LigD (ATP dependent polydeoxyribonucleotide synthase) (thermostable DNA ligase) (ATP dependent polynucleotide ligase) (sealase) (DNA repair enzyme) (DNA joinase) insig. 28 54
  Herbaspirillum seropedicae SmR1 HSERO_RS11360 DNA ligase insig. 28 59
  Burkholderia phytofirmans PsJN BPHYT_RS09215 ATP-dependent DNA ligase insig. 28 55
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1216 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD insig. 27 61
  Pseudomonas sp. S08-1 OH686_01425 DNA ligase D cofit 28 61
  Agrobacterium fabrum C58 Atu6090 ATP-dependent DNA ligase insig. 27 52
  Ralstonia solanacearum PSI07 RPSI07_RS21105 DNA ligase D insig. 30 62
  Pseudomonas fluorescens FW300-N2C3 AO356_26950 ATP-dependent DNA ligase insig. 27 61
  Cupriavidus basilensis FW507-4G11 RR42_RS37085 ATP-dependent DNA ligase insig. 30 34
  Variovorax sp. SCN45 GFF6242 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD insig. 28 56
  Sinorhizobium meliloti 1021 SM_b21044 ATP-dependent DNA ligase insig. 26 45
  Rhizobium sp. OAE497 ABIE40_RS27965 non-homologous end-joining DNA ligase insig. 33 35
  Pseudomonas fluorescens SBW25 PFLU_RS14185 DNA ligase D insig. 28 56
  Pseudomonas fluorescens SBW25-INTG PFLU_RS14185 DNA ligase D insig. 28 56
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4314 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD insig. 27 58
  Sinorhizobium meliloti 1021 SMa0414 hypothetical protein insig. 29 48
  Rhizobium sp. OAE497 ABIE40_RS28460 DNA ligase D insig. 28 57
  Paraburkholderia graminis OAS925 ABIE53_002080 bifunctional non-homologous end joining protein LigD insig. 28 56
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00864 ATP-dependent DNA ligase LigD phosphoesterase module/ATP-dependent DNA ligase LigD polymerase module insig. 28 56
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06196 ATP-dependent DNA ligase LigD phosphoesterase module/ATP-dependent DNA ligase LigD polymerase module insig. 26 56
  Ralstonia sp. UNC404CL21Col ABZR87_RS08115 DNA ligase D insig. 30 55
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2247.1 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD insig. 29 46
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.140.1 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD insig. 28 57
  Bosea sp. OAE506 ABIE41_RS04575 DNA ligase D insig. 28 56
  Rhizobium sp. OAE497 ABIE40_RS29525 DNA ligase D insig. 27 57
  Bosea sp. OAE506 ABIE41_RS06605 DNA ligase D insig. 26 57
  Sinorhizobium meliloti 1021 SMa0424 ATP-dependent DNA ligase insig. 29 57
  Pseudomonas putida KT2440 PP_3260 DNA ligase D insig. 26 56
  Paraburkholderia sabiae LMG 24235 QEN71_RS43605 DNA ligase insig. 34 35
  Rhizobium sp. OAE497 ABIE40_RS26435 DNA ligase D insig. 28 56
  Lysobacter sp. OAE881 ABIE51_RS12760 DNA ligase D insig. 27 55
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS20470 DNA ligase D insig. 25 50
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3858 DNA ligase D insig. 25 56
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF111 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD insig. 27 53
  Pseudomonas syringae pv. syringae B728a Psyr_3245 ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module insig. 25 58
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3245 ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module insig. 25 58
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS02935 DNA ligase D insig. 27 55
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10580 DNA ligase D insig. 27 60
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01036 DNA ligase D, ligase domain-containing protein no data 31 39
  Variovorax sp. OAS795 ABID97_RS09860 RNA ligase family protein insig. 32 34
  Sinorhizobium meliloti 1021 SM_b20685 hypothetical protein insig. 28 49
  Paraburkholderia graminis OAS925 ABIE53_005971 ATP-dependent DNA ligase no data 43 14
  Rhodopseudomonas palustris CGA009 TX73_018915 DNA ligase D insig. 28 50
  Sinorhizobium meliloti 1021 SMc03959 hypothetical protein insig. 23 55