Homologs of Psest_3408 from Pseudomonas stutzeri RCH2

Predicted transcriptional regulators

90 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas stutzeri RCH2 Psest_3408 Predicted transcriptional regulators sig. 100 100
o Shewanella oneidensis MR-1 SO3867 transcriptional regulator, Cro/CI family (NCBI ptt file) insig. 59 93
o Alteromonas macleodii MIT1002 MIT1002_02112 anaerobic benzoate catabolism transcriptional regulator insig. 51 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS34765 helix-turn-helix transcriptional regulator insig. 52 90
  Dickeya dadantii 3937 DDA3937_RS13775 helix-turn-helix transcriptional regulator insig. 50 82
  Dickeya dianthicola ME23 DZA65_RS07685 helix-turn-helix transcriptional regulator insig. 50 82
  Pseudomonas simiae WCS417 PS417_24885 transcriptional regulator strong 47 82
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS23980 XRE family transcriptional regulator insig. 49 84
  Ralstonia solanacearum GMI1000 RS_RS11670 XRE family transcriptional regulator insig. 44 84
  Escherichia coli Nissle 1917 ECOLIN_RS26340 helix-turn-helix transcriptional regulator cofit 42 89
  Pseudomonas sp. DMC3 GFF3394 hypothetical protein cofit 46 86
  Dickeya dadantii 3937 DDA3937_RS21910 helix-turn-helix transcriptional regulator insig. 39 90
o Dickeya dianthicola 67-19 HGI48_RS08550 helix-turn-helix transcriptional regulator insig. 39 90
o Pseudomonas sp. S08-1 OH686_23020 Transcriptional regulator, Xre family insig. 41 88
  Variovorax sp. OAS795 ABID97_RS23605 helix-turn-helix transcriptional regulator insig. 41 84
  Escherichia coli ECRC100 OKFHMN_11715 hipB Transcriptional regulator, contains XRE-family HTH domain cofit 40 89
  Escherichia coli ECRC101 MCAODC_02230 hipB Transcriptional regulator, contains XRE-family HTH domain insig. 40 89
  Escherichia coli ECRC102 NIAGMN_09565 hipB Transcriptional regulator, contains XRE-family HTH domain insig. 40 89
  Escherichia coli ECRC99 KEDOAH_16430 hipB Transcriptional regulator, contains XRE-family HTH domain no data 40 89
  Pseudomonas aeruginosa PA14 IKLFDK_12720 transcriptional regulator sig. 39 88
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3490 Predicted transcriptional regulators no data 39 88
o Shewanella loihica PV-4 Shew_3490 XRE family transcriptional regulator (RefSeq) insig. 35 99
  Castellaniella sp019104865 MT123 ABCV34_RS15905 helix-turn-helix transcriptional regulator no data 37 86
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS10815 helix-turn-helix domain-containing protein insig. 37 96
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS15920 XRE family transcriptional regulator no data 36 92
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS23520 XRE family transcriptional regulator no data 36 92
  Ralstonia solanacearum PSI07 RPSI07_RS09355 XRE family transcriptional regulator sig. 41 86
  Variovorax sp. SCN45 GFF3233 hypothetical protein no data 39 96
  Ralstonia solanacearum PSI07 RPSI07_RS25065 XRE family transcriptional regulator insig. 33 99
  Ralstonia solanacearum GMI1000 RS_RS05450 XRE family transcriptional regulator strong 40 86
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS20215 transcriptional regulator insig. 35 82
  Herbaspirillum seropedicae SmR1 HSERO_RS00085 transcriptional regulator insig. 35 82
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS07920 XRE family transcriptional regulator cofit 40 86
  Ralstonia solanacearum UW163 UW163_RS05705 XRE family transcriptional regulator sig. 40 86
  Alteromonas macleodii MIT1002 MIT1002_00748 DNA-binding transcriptional repressor PuuR insig. 33 88
  Ralstonia solanacearum GMI1000 RS_RS15820 XRE family transcriptional regulator cofit 40 86
  Ralstonia solanacearum PSI07 RPSI07_RS18795 XRE family transcriptional regulator insig. 39 85
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09060 helix-turn-helix transcriptional regulator insig. 36 90
  Ralstonia solanacearum PSI07 RPSI07_RS22035 XRE family transcriptional regulator insig. 36 88
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS14665 XRE family transcriptional regulator strong 40 86
  Ralstonia solanacearum UW163 UW163_RS12135 XRE family transcriptional regulator insig. 40 86
  Escherichia coli ECOR27 NOLOHH_18360 dicA DNA-binding transcriptional dual regulator DicA no data 34 92
  Escherichia coli BW25113 b1570 dicA Qin prophage; predicted regulator for DicB (NCBI) no data 34 92
  Escherichia fergusonii Becca EFB2_02548 HTH-type transcriptional regulator SutR insig. 33 100
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS01955 helix-turn-helix domain-containing protein insig. 41 70
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS08105 XRE family transcriptional regulator insig. 40 86
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS19065 helix-turn-helix domain-containing protein no data 32 85
  Sinorhizobium meliloti 1021 SMc02184 transcriptional regulator insig. 35 86
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS05895 helix-turn-helix domain-containing protein insig. 47 64
  Shewanella sp. ANA-3 Shewana3_3803 XRE family transcriptional regulator (RefSeq) cofit 31 97
  Escherichia coli BL21 ECD_01392 putative DNA-binding transcriptional regulator no data 33 96
  Escherichia coli ECOR27 NOLOHH_19280 sutR DNA-binding transcriptional regulator SutR insig. 33 96
  Escherichia coli ECRC62 BNILDI_17730 sutR DNA-binding transcriptional regulator SutR insig. 33 96
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02281 HTH-type transcriptional regulator SutR insig. 33 96
  Escherichia coli BW25113 b1434 ydcN predicted DNA-binding transcriptional regulator (NCBI) insig. 33 96
  Escherichia coli ECOR38 HEPCGN_26215 sutR DNA-binding transcriptional regulator SutR insig. 33 96
  Escherichia coli ECRC100 OKFHMN_01605 sutR DNA-binding transcriptional regulator SutR insig. 33 96
  Escherichia coli ECRC101 MCAODC_16335 sutR DNA-binding transcriptional regulator SutR insig. 33 96
  Escherichia coli ECRC102 NIAGMN_25740 sutR DNA-binding transcriptional regulator SutR no data 33 96
  Escherichia coli ECRC98 JDDGAC_04095 sutR DNA-binding transcriptional regulator SutR insig. 33 96
  Escherichia coli ECRC99 KEDOAH_26835 sutR DNA-binding transcriptional regulator SutR no data 33 96
  Escherichia coli Nissle 1917 ECOLIN_RS08275 DNA-binding transcriptional regulator SutR no data 33 96
  Variovorax sp. OAS795 ABID97_RS07740 helix-turn-helix transcriptional regulator insig. 30 77
  Herbaspirillum seropedicae SmR1 HSERO_RS11685 transcription factor no data 33 90
  Dickeya dadantii 3937 DDA3937_RS08405 helix-turn-helix transcriptional regulator no data 38 82
  Dickeya dianthicola 67-19 HGI48_RS08545 helix-turn-helix transcriptional regulator insig. 38 82
  Ralstonia solanacearum UW163 UW163_RS16180 XRE family transcriptional regulator no data 38 86
  Dickeya dadantii 3937 DDA3937_RS04070 helix-turn-helix transcriptional regulator strong 38 82
  Shewanella oneidensis MR-1 SOA0002 type II restriction-modification system activator, putative (NCBI ptt file) strong 39 88
  Ralstonia solanacearum UW163 UW163_RS05495 XRE family transcriptional regulator insig. 38 86
  Methanococcus maripaludis JJ MMJJ_RS04940 XRE family transcriptional regulator insig. 37 92
  Methanococcus maripaludis S2 MMP_RS00545 XRE family transcriptional regulator insig. 37 92
  Dechlorosoma suillum PS Dsui_2833 putative transcriptional regulator insig. 35 82
  Acidovorax sp. GW101-3H11 Ac3H11_4306 Predicted transcriptional regulators insig. 33 92
  Cupriavidus basilensis FW507-4G11 RR42_RS25810 DNA-binding protein insig. 46 71
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1294.1 hypothetical protein insig. 33 95
  Rhodanobacter denitrificans MT42 LRK55_RS10465 helix-turn-helix transcriptional regulator cofit 31 85
  Desulfovibrio vulgaris Miyazaki F DvMF_0794 transcriptional regulator, XRE family (RefSeq) strong 36 84
  Pseudomonas fluorescens SBW25 PFLU_RS13890 helix-turn-helix domain-containing protein no data 38 93
  Pseudomonas fluorescens SBW25-INTG PFLU_RS13890 helix-turn-helix domain-containing protein no data 38 93
  Bacteroides ovatus ATCC 8483 BACOVA_05585 DNA-binding helix-turn-helix protein insig. 40 73
  Pseudomonas fluorescens SBW25 PFLU_RS09495 helix-turn-helix transcriptional regulator insig. 33 86
  Pseudomonas fluorescens SBW25-INTG PFLU_RS09495 helix-turn-helix transcriptional regulator insig. 33 86
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_919 FIG00954373: hypothetical protein insig. 33 86
  Bacteroides thetaiotaomicron VPI-5482 BT4733 conserved hypothetical protein (NCBI ptt file) insig. 40 73
  Caulobacter crescentus NA1000 CCNA_03267 HipB-related transcriptional regulatory protein cofit 35 82
  Caulobacter crescentus NA1000 Δfur CCNA_03267 HipB-related transcriptional regulatory protein cofit 35 82
  Pseudomonas fluorescens FW300-N2C3 AO356_00255 DNA-binding protein insig. 35 82
  Escherichia coli ECOR38 HEPCGN_02335 transcriptional regulator insig. 34 84
  Escherichia coli BL21 ECD_10021 Repressor protein C2 no data 37 82