Homologs of PS417_12915 from Pseudomonas simiae WCS417

DNA-binding protein
SEED: YheO-like PAS domain

84 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_12915 DNA-binding protein insig. 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS13585 DNA-binding protein insig. 90 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS13585 DNA-binding protein insig. 90 100
o Cupriavidus basilensis FW507-4G11 RR42_RS11120 DNA-binding protein sig. 74 98
o Paraburkholderia sabiae LMG 24235 QEN71_RS18565 PAS domain-containing protein insig. 67 100
o Acidovorax sp. GW101-3H11 Ac3H11_38 YheO-like PAS domain insig. 71 93
o Pectobacterium carotovorum WPP14 HER17_RS09825 helix-turn-helix transcriptional regulator cofit 66 95
o Dickeya dadantii 3937 DDA3937_RS08080 PAS domain-containing protein insig. 65 99
  Paraburkholderia sabiae LMG 24235 QEN71_RS14280 helix-turn-helix transcriptional regulator insig. 67 95
o Acinetobacter baumannii LAC-4 RR41_RS05440 PAS domain-containing protein insig. 62 97
o Herbaspirillum seropedicae SmR1 HSERO_RS01425 DNA-binding protein insig. 65 96
o Variovorax sp. SCN45 GFF2493 YheO-like PAS domain insig. 56 100
o Ralstonia solanacearum PSI07 RPSI07_RS06825 DNA-binding protein insig. 49 98
o Ralstonia solanacearum GMI1000 RS_RS24435 DNA-binding protein insig. 50 94
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS16625 DNA-binding protein insig. 49 94
o Ralstonia solanacearum UW163 UW163_RS17980 DNA-binding protein insig. 49 94
o Ralstonia sp. UNC404CL21Col ABZR87_RS17665 PAS domain-containing protein insig. 50 94
o Serratia liquefaciens MT49 IAI46_10330 PAS domain-containing protein insig. 45 95
o Desulfovibrio vulgaris Hildenborough JW710 DVU2206 conserved hypothetical protein (TIGR) strong 31 85
  Sinorhizobium meliloti 1021 SMa0496 hypothetical protein sig. 33 94
  Paraburkholderia sabiae LMG 24235 QEN71_RS12460 PAS domain-containing protein sig. 28 100
  Pseudomonas aeruginosa MRSN321 DY961_RS13545 dauR;inference=COORDINATES transcriptional regulator DauR insig. 31 98
  Pseudomonas aeruginosa PA14 IKLFDK_19905 Transcriptional regulator DauR insig. 31 98
  Pseudomonas aeruginosa PUPa3 DQ20_RS48840 dauR;inference=COORDINATES transcriptional regulator DauR insig. 30 98
  Pseudomonas sp. S08-1 OH686_07030 YheO-like PAS domain insig. 32 100
  Pseudomonas fluorescens FW300-N2C3 AO356_17355 hypothetical protein sig. 32 98
  Pseudomonas sp. SVBP6 COO64_RS11670 transcriptional regulator insig. 32 92
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5396 YheO-like PAS domain sig. 32 98
  Pseudomonas sp. DMC3 GFF1929 Transcriptional regulator DauR cofit 31 99
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1693 YheO-like PAS domain insig. 31 100
  Pseudomonas fluorescens FW300-N2E3 AO353_04640 hypothetical protein insig. 32 92
  Pseudomonas simiae WCS417 PS417_10905 hypothetical protein insig. 30 99
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_923 YheO-like PAS domain insig. 31 92
  Pseudomonas sp. RS175 PFR28_03547 Transcriptional regulator DauR sig. 31 92
o Vibrio cholerae E7946 ATCC 55056 CSW01_01875 hypothetical protein cofit 27 100
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05884 Predicted transcriptional regulator YheO, contains PAS and DNA-binding HTH domains sig. 27 95
  Paraburkholderia graminis OAS925 ABIE53_005529 putative transcriptional regulator YheO strong 28 100
  Pectobacterium carotovorum WPP14 HER17_RS02010 transcriptional regulator insig. 27 98
o Rahnella sp. WP5 EX31_RS04470 transcriptional regulator insig. 27 97
  Sinorhizobium meliloti 1021 SMc04327 hypothetical protein insig. 30 90
  Serratia liquefaciens MT49 IAI46_12675 PAS domain-containing protein insig. 29 96
o Erwinia amylovora T8 OLJFJH_03930 Uncharacterized protein YheO insig. 25 98
  Dickeya dadantii 3937 DDA3937_RS19340 transcriptional regulator insig. 27 97
o Dickeya dianthicola 67-19 HGI48_RS19440 transcriptional regulator cofit 27 97
o Dickeya dianthicola ME23 DZA65_RS20560 transcriptional regulator insig. 27 97
  Pseudomonas sp. SVBP6 COO64_RS25095 transcriptional regulator insig. 27 89
  Burkholderia phytofirmans PsJN BPHYT_RS10285 hypothetical protein strong 26 95
  Pseudomonas sp. BP01 JOY50_RS26595 transcriptional regulator insig. 29 92
  Burkholderia phytofirmans PsJN BPHYT_RS28105 hypothetical protein no data 26 99
  Serratia liquefaciens MT49 IAI46_23490 transcriptional regulator cofit 27 97
o Shewanella sp. ANA-3 Shewana3_2973 YheO domain-containing protein (RefSeq) strong 23 100
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01214 Predicted transcriptional regulator YheO, contains PAS and DNA-binding HTH domains sig. 28 99
o Shewanella oneidensis MR-1 SO1402 conserved hypothetical protein (NCBI ptt file) sig. 23 100
  Paraburkholderia graminis OAS925 ABIE53_005722 putative transcriptional regulator YheO strong 28 98
o Klebsiella pneumoniae MKP103 KDGMDA_06760 Uncharacterized protein YheO insig. 26 97
  Rhizobium sp. OAE497 ABIE40_RS21180 PAS domain-containing protein insig. 29 92
o Klebsiella michiganensis M5al BWI76_RS25905 hypothetical protein strong 26 97
  Pseudomonas putida KT2440 PP_2931 conserved protein of unknown function insig. 26 85
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS21525 transcriptional regulator cofit 25 97
o Pantoea sp. MT58 IAI47_02055 transcriptional regulator insig. 25 97
  Pseudomonas putida KT2440 PP_3192 conserved protein of unknown function sig. 28 95
  Pseudomonas sp. BP01 JOY50_RS24520 transcriptional regulator insig. 24 99
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_12210 Uncharacterized protein YheO no data 25 97
o Erwinia tracheiphila SCR3 LU632_RS22710 transcriptional regulator strong 25 97
o Escherichia coli BL21 ECD_03197 putative PAS domain-containing DNA-binding transcriptional regulator insig. 25 97
o Escherichia fergusonii Becca EFB2_00477 Transcriptional regulator DauR sig. 25 97
o Escherichia coli ECOR27 NOLOHH_09100 yheO Uncharacterized protein YheO sig. 25 97
o Escherichia coli ECRC100 OKFHMN_17300 yheO Uncharacterized protein YheO cofit 25 97
o Escherichia coli ECRC101 MCAODC_07830 yheO Uncharacterized protein YheO sig. 25 97
o Escherichia coli ECRC102 NIAGMN_15070 yheO Uncharacterized protein YheO insig. 25 97
o Escherichia coli ECRC62 BNILDI_02420 yheO Uncharacterized protein YheO insig. 25 97
o Escherichia coli ECRC98 JDDGAC_20930 yheO Uncharacterized protein YheO insig. 25 97
o Escherichia coli ECRC99 KEDOAH_10840 yheO Uncharacterized protein YheO no data 25 97
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00357 Transcriptional regulator DauR insig. 25 97
o Escherichia coli Nissle 1917 ECOLIN_RS19165 transcriptional regulator insig. 25 97
o Escherichia coli BW25113 b3346 yheO orf, hypothetical protein (VIMSS) sig. 25 97
o Escherichia coli ECOR38 HEPCGN_16130 yheO Uncharacterized protein YheO insig. 25 97
o Enterobacter asburiae PDN3 EX28DRAFT_4184 Uncharacterized protein conserved in bacteria insig. 25 97
o Enterobacter sp. TBS_079 MPMX20_04239 Transcriptional regulator DauR strong 25 97
  Pseudomonas fluorescens SBW25 PFLU_RS27750 hypothetical protein insig. 25 95
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27750 hypothetical protein insig. 25 95
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3726 YheO-like PAS domain cofit 24 97
  Pseudomonas simiae WCS417 PS417_26120 hypothetical protein insig. 25 95
  Fusobacterium nucleatum SB010 HUW76_09955 PAS domain-containing protein cofit 21 95