Homologs of PS417_12915 from Pseudomonas simiae WCS417

DNA-binding protein
SEED: YheO-like PAS domain

85 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_12915 DNA-binding protein insig. 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS13585 DNA-binding protein insig. 90 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS13585 DNA-binding protein insig. 90 100
o Cupriavidus basilensis FW507-4G11 RR42_RS11120 DNA-binding protein sig. 74 98
o Paraburkholderia sabiae LMG 24235 QEN71_RS18565 PAS domain-containing protein insig. 67 100
o Acidovorax sp. GW101-3H11 Ac3H11_38 YheO-like PAS domain insig. 71 93
o Pectobacterium carotovorum WPP14 HER17_RS09825 helix-turn-helix transcriptional regulator cofit 66 95
o Dickeya dadantii 3937 DDA3937_RS08080 PAS domain-containing protein insig. 65 99
  Paraburkholderia sabiae LMG 24235 QEN71_RS14280 helix-turn-helix transcriptional regulator insig. 67 95
o Acinetobacter baumannii LAC-4 RR41_RS05440 PAS domain-containing protein insig. 62 97
o Herbaspirillum seropedicae SmR1 HSERO_RS01425 DNA-binding protein insig. 65 96
o Variovorax sp. SCN45 GFF2493 YheO-like PAS domain insig. 56 100
o Ralstonia solanacearum PSI07 RPSI07_RS06825 DNA-binding protein insig. 49 98
o Ralstonia solanacearum GMI1000 RS_RS24435 DNA-binding protein insig. 50 94
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS16625 DNA-binding protein insig. 49 94
o Ralstonia solanacearum UW163 UW163_RS17980 DNA-binding protein insig. 49 94
o Ralstonia sp. UNC404CL21Col ABZR87_RS17665 PAS domain-containing protein insig. 50 94
o Serratia liquefaciens MT49 IAI46_10330 PAS domain-containing protein insig. 45 95
  Desulfovibrio vulgaris Hildenborough JW710 DVU2206 conserved hypothetical protein (TIGR) strong 31 85
  Sinorhizobium meliloti 1021 SMa0496 hypothetical protein sig. 33 94
  Paraburkholderia sabiae LMG 24235 QEN71_RS12460 PAS domain-containing protein sig. 28 100
  Pseudomonas aeruginosa MRSN321 DY961_RS13545 dauR;inference=COORDINATES transcriptional regulator DauR insig. 31 98
  Pseudomonas aeruginosa PA14 IKLFDK_19905 Transcriptional regulator DauR insig. 31 98
  Pseudomonas aeruginosa PUPa3 DQ20_RS48840 dauR;inference=COORDINATES transcriptional regulator DauR insig. 30 98
  Pseudomonas sp. S08-1 OH686_07030 YheO-like PAS domain insig. 32 100
  Pseudomonas fluorescens FW300-N2C3 AO356_17355 hypothetical protein sig. 32 98
  Pseudomonas sp. SVBP6 COO64_RS11670 transcriptional regulator insig. 32 92
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5396 YheO-like PAS domain sig. 32 98
  Pseudomonas sp. DMC3 GFF1929 Transcriptional regulator DauR cofit 31 99
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1693 YheO-like PAS domain insig. 31 100
  Pseudomonas fluorescens FW300-N2E3 AO353_04640 hypothetical protein insig. 32 92
  Pseudomonas simiae WCS417 PS417_10905 hypothetical protein insig. 30 99
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_923 YheO-like PAS domain insig. 31 92
  Pseudomonas sp. RS175 PFR28_03547 Transcriptional regulator DauR sig. 31 92
  Vibrio cholerae E7946 ATCC 55056 CSW01_01875 hypothetical protein cofit 27 100
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05884 Predicted transcriptional regulator YheO, contains PAS and DNA-binding HTH domains sig. 27 95
  Paraburkholderia graminis OAS925 ABIE53_005529 putative transcriptional regulator YheO strong 28 100
  Pectobacterium carotovorum WPP14 HER17_RS02010 transcriptional regulator insig. 27 98
  Rahnella sp. WP5 EX31_RS04470 transcriptional regulator insig. 27 97
  Sinorhizobium meliloti 1021 SMc04327 hypothetical protein insig. 30 90
  Serratia liquefaciens MT49 IAI46_12675 PAS domain-containing protein insig. 29 96
  Erwinia amylovora T8 OLJFJH_03930 Uncharacterized protein YheO insig. 25 98
  Dickeya dadantii 3937 DDA3937_RS19340 transcriptional regulator insig. 27 97
  Dickeya dianthicola 67-19 HGI48_RS19440 transcriptional regulator cofit 27 97
  Dickeya dianthicola ME23 DZA65_RS20560 transcriptional regulator insig. 27 97
  Pseudomonas sp. SVBP6 COO64_RS25095 transcriptional regulator insig. 27 89
  Burkholderia phytofirmans PsJN BPHYT_RS10285 hypothetical protein strong 26 95
  Pseudomonas sp. BP01 JOY50_RS26595 transcriptional regulator insig. 29 92
  Burkholderia phytofirmans PsJN BPHYT_RS28105 hypothetical protein no data 26 99
  Serratia liquefaciens MT49 IAI46_23490 transcriptional regulator cofit 27 97
  Shewanella sp. ANA-3 Shewana3_2973 YheO domain-containing protein (RefSeq) strong 23 100
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01214 Predicted transcriptional regulator YheO, contains PAS and DNA-binding HTH domains sig. 28 99
  Shewanella oneidensis MR-1 SO1402 conserved hypothetical protein (NCBI ptt file) sig. 23 100
  Paraburkholderia graminis OAS925 ABIE53_005722 putative transcriptional regulator YheO strong 28 98
  Klebsiella pneumoniae MKP103 KDGMDA_06760 Uncharacterized protein YheO insig. 26 97
  Klebsiella pneumoniae MRSN742743 KFA93_RS10375 transcriptional regulator strong 26 97
  Rhizobium sp. OAE497 ABIE40_RS21180 PAS domain-containing protein insig. 29 92
  Klebsiella michiganensis M5al BWI76_RS25905 hypothetical protein strong 26 97
  Pseudomonas putida KT2440 PP_2931 conserved protein of unknown function insig. 26 85
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS21525 transcriptional regulator cofit 25 97
  Pantoea sp. MT58 IAI47_02055 transcriptional regulator insig. 25 97
  Pseudomonas putida KT2440 PP_3192 conserved protein of unknown function sig. 28 95
  Pseudomonas sp. BP01 JOY50_RS24520 transcriptional regulator insig. 24 99
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_12210 Uncharacterized protein YheO no data 25 97
  Erwinia tracheiphila SCR3 LU632_RS22710 transcriptional regulator strong 25 97
  Escherichia coli BL21 ECD_03197 putative PAS domain-containing DNA-binding transcriptional regulator insig. 25 97
  Escherichia fergusonii Becca EFB2_00477 Transcriptional regulator DauR sig. 25 97
  Escherichia coli ECOR27 NOLOHH_09100 yheO Uncharacterized protein YheO sig. 25 97
  Escherichia coli ECOR38 HEPCGN_16130 yheO Uncharacterized protein YheO insig. 25 97
  Escherichia coli ECRC100 OKFHMN_17300 yheO Uncharacterized protein YheO cofit 25 97
  Escherichia coli ECRC101 MCAODC_07830 yheO Uncharacterized protein YheO sig. 25 97
  Escherichia coli ECRC102 NIAGMN_15070 yheO Uncharacterized protein YheO insig. 25 97
  Escherichia coli ECRC62 BNILDI_02420 yheO Uncharacterized protein YheO insig. 25 97
  Escherichia coli ECRC98 JDDGAC_20930 yheO Uncharacterized protein YheO insig. 25 97
  Escherichia coli ECRC99 KEDOAH_10840 yheO Uncharacterized protein YheO no data 25 97
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00357 Transcriptional regulator DauR insig. 25 97
  Escherichia coli Nissle 1917 ECOLIN_RS19165 transcriptional regulator insig. 25 97
  Enterobacter asburiae PDN3 EX28DRAFT_4184 Uncharacterized protein conserved in bacteria insig. 25 97
  Enterobacter sp. TBS_079 MPMX20_04239 Transcriptional regulator DauR strong 25 97
  Escherichia coli BW25113 b3346 yheO orf, hypothetical protein (VIMSS) sig. 25 97
  Pseudomonas fluorescens SBW25 PFLU_RS27750 hypothetical protein insig. 25 95
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27750 hypothetical protein insig. 25 95
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3726 YheO-like PAS domain cofit 24 97
  Pseudomonas simiae WCS417 PS417_26120 hypothetical protein insig. 25 95
  Fusobacterium nucleatum SB010 HUW76_09955 PAS domain-containing protein cofit 21 95