Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2120 | | FIG00554530: hypothetical protein | insig. | 100 | 100 |
o | Enterobacter sp. TBS_079 | MPMX20_04172 | | putative signaling protein | insig. | 75 | 97 |
o | Enterobacter asburiae PDN3 | EX28DRAFT_3316 | | diguanylate cyclase (GGDEF) domain | insig. | 75 | 97 |
o | Pantoea sp. MT58 | IAI47_03280 | | EAL domain-containing protein | insig. | 66 | 97 |
o | Rahnella sp. WP5 | EX31_RS12105 | | bifunctional diguanylate cyclase/phosphodiesterase | insig. | 63 | 97 |
o | Cupriavidus basilensis FW507-4G11 | RR42_RS22465 | | membrane protein | insig. | 57 | 97 |
o | Ralstonia solanacearum PSI07 | RPSI07_RS21500 | | bifunctional diguanylate cyclase/phosphodiesterase | insig. | 57 | 96 |
o | Ralstonia sp. UNC404CL21Col | ABZR87_RS07670 | | bifunctional diguanylate cyclase/phosphodiesterase | insig. | 57 | 97 |
o | Ralstonia solanacearum GMI1000 | RS_RS02540 | | bifunctional diguanylate cyclase/phosphodiesterase | insig. | 56 | 97 |
o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS11715 | | bifunctional diguanylate cyclase/phosphodiesterase | insig. | 56 | 98 |
o | Ralstonia solanacearum UW163 | UW163_RS01870 | | bifunctional diguanylate cyclase/phosphodiesterase | insig. | 56 | 98 |
o | Pseudomonas fluorescens FW300-N2C3 | AO356_22925 | | histidine kinase | insig. | 55 | 98 |
o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_467 | | Sensory box/GGDEF family protein | insig. | 55 | 98 |
o | Pseudomonas sp. RS175 | PFR28_02457 | | putative signaling protein | insig. | 56 | 98 |
o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4670 | | Sensory box/GGDEF family protein | insig. | 55 | 98 |
o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3263 | | Sensory box/GGDEF family protein | insig. | 56 | 96 |
o | Pseudomonas fluorescens SBW25 | PFLU_RS13445 | | bifunctional diguanylate cyclase/phosphodiesterase | insig. | 54 | 98 |
o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS13445 | | bifunctional diguanylate cyclase/phosphodiesterase | insig. | 54 | 98 |
o | Herbaspirillum seropedicae SmR1 | HSERO_RS16570 | | membrane protein | insig. | 56 | 98 |
o | Pseudomonas fluorescens FW300-N2E3 | AO353_22910 | | histidine kinase | insig. | 54 | 99 |
o | Pseudomonas simiae WCS417 | PS417_12760 | | histidine kinase | insig. | 54 | 98 |
o | Pseudomonas putida KT2440 | PP_3581 | | conserved membrane protein of unknown function | insig. | 55 | 97 |
o | Paraburkholderia sabiae LMG 24235 | QEN71_RS30355 | | bifunctional diguanylate cyclase/phosphodiesterase | insig. | 54 | 96 |
| Pantoea sp. MT58 | IAI47_03275 | | EAL domain-containing protein | insig. | 53 | 97 |
o | Pseudomonas syringae pv. syringae B728a | Psyr_2486 | | diguanylate cyclase/phosphodiesterase | insig. | 53 | 98 |
o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2486 | | diguanylate cyclase/phosphodiesterase | insig. | 53 | 98 |
o | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.2826.1 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | insig. | 50 | 95 |
o | Burkholderia phytofirmans PsJN | BPHYT_RS29225 | | diguanylate phosphodiesterase | insig. | 45 | 97 |
o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01476 | | diguanylate cyclase/phosphodiesterase | insig. | 46 | 98 |
| Enterobacter asburiae PDN3 | EX28DRAFT_1002 | | diguanylate cyclase (GGDEF) domain | insig. | 42 | 96 |
| Enterobacter sp. TBS_079 | MPMX20_02445 | | putative signaling protein | insig. | 42 | 96 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS20660 | | EAL domain-containing protein | insig. | 45 | 96 |
o | Paraburkholderia graminis OAS925 | ABIE53_005195 | | diguanylate cyclase (GGDEF)-like protein | sig. | 45 | 92 |
o | Acinetobacter radioresistens SK82 | MPMX26_00475 | | putative signaling protein | strong | 42 | 96 |
o | Variovorax sp. SCN45 | GFF3184 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | insig. | 43 | 90 |
o | Pseudomonas sp. S08-1 | OH686_19830 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | insig. | 40 | 97 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_17145 | | diguanylate phosphodiesterase | insig. | 37 | 95 |
| Dechlorosoma suillum PS | Dsui_1429 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | cofit | 49 | 60 |
| Pseudomonas syringae pv. syringae B728a | Psyr_3843 | | diguanylate cyclase/phosphodiesterase | insig. | 37 | 96 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3843 | | diguanylate cyclase/phosphodiesterase | insig. | 37 | 96 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3221 | | Sensory box/GGDEF family protein | insig. | 37 | 95 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_4602 | | Sensory box/GGDEF family protein | insig. | 39 | 95 |
| Dechlorosoma suillum PS | Dsui_2148 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | cofit | 48 | 61 |
| Marinobacter adhaerens HP15 | HP15_806 | | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) | insig. | 48 | 60 |
| Pseudomonas fluorescens SBW25 | PFLU_RS06660 | | bifunctional diguanylate cyclase/phosphodiesterase | insig. | 37 | 97 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS06660 | | bifunctional diguanylate cyclase/phosphodiesterase | insig. | 37 | 97 |
| Pseudomonas simiae WCS417 | PS417_06630 | | diguanylate phosphodiesterase | insig. | 37 | 97 |
| Shewanella sp. ANA-3 | Shewana3_3829 | | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) | cofit | 48 | 61 |
| Pseudomonas putida KT2440 | PP_1144 | | conserved membrane protein of unknown function | insig. | 37 | 95 |
| Magnetospirillum magneticum AMB-1 | AMB_RS23225 | | GGDEF domain-containing protein | insig. | 45 | 61 |
| Shewanella oneidensis MR-1 | SO0341 | | sensory box protein (NCBI ptt file) | insig. | 48 | 61 |
| Dechlorosoma suillum PS | Dsui_0894 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | cofit | 47 | 60 |
| Dechlorosoma suillum PS | Dsui_3161 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | sig. | 48 | 61 |
| Shewanella amazonensis SB2B | Sama_3298 | | sensory box protein (RefSeq) | insig. | 47 | 61 |
| Magnetospirillum magneticum AMB-1 | AMB_RS18310 | | bifunctional diguanylate cyclase/phosphodiesterase | cofit | 45 | 61 |
| Dechlorosoma suillum PS | Dsui_3104 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | strong | 45 | 62 |
| Pseudomonas fluorescens SBW25 | PFLU_RS00935 | | EAL domain-containing protein | cofit | 44 | 62 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS00935 | | EAL domain-containing protein | strong | 44 | 62 |
| Dechlorosoma suillum PS | Dsui_2365 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | cofit | 45 | 61 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_14260 | | diguanylate cyclase | insig. | 45 | 62 |
| Pseudomonas sp. S08-1 | OH686_11085 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | insig. | 45 | 61 |
| Pseudomonas sp. S08-1 | OH686_14965 | | Sensory box/GGDEF family protein | cofit | 44 | 63 |
| Magnetospirillum magneticum AMB-1 | AMB_RS06165 | | CBS domain-containing protein | insig. | 44 | 61 |
| Dechlorosoma suillum PS | Dsui_0262 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | cofit | 47 | 61 |
| Dechlorosoma suillum PS | Dsui_2547 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | insig. | 46 | 61 |
| Shewanella amazonensis SB2B | Sama_2405 | | sensory box protein (RefSeq) | insig. | 45 | 62 |
| Dechlorosoma suillum PS | Dsui_1564 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | cofit | 45 | 59 |
| Shewanella loihica PV-4 | Shew_0813 | | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) | insig. | 44 | 62 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_490 | | GGDEF domain protein | insig. | 44 | 62 |
| Burkholderia phytofirmans PsJN | BPHYT_RS00875 | | diguanylate cyclase | insig. | 34 | 96 |
| Pseudomonas sp. S08-1 | OH686_03710 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | cofit | 46 | 60 |
| Acidovorax sp. GW101-3H11 | Ac3H11_448 | | Sensory box/GGDEF family protein | insig. | 45 | 61 |
| Azospirillum sp. SherDot2 | MPMX19_06128 | | hypothetical protein | insig. | 44 | 61 |
| Pseudomonas simiae WCS417 | PS417_00920 | | diguanylate cyclase | strong | 43 | 62 |
| Pseudomonas sp. RS175 | PFR28_03785 | | hypothetical protein | insig. | 44 | 61 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS04295 | | diguanylate cyclase | strong | 46 | 63 |
| Dechlorosoma suillum PS | Dsui_2160 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | insig. | 45 | 63 |
| Pseudomonas sp. RS175 | PFR28_04760 | | hypothetical protein | strong | 44 | 61 |
| Dechlorosoma suillum PS | Dsui_1011 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | insig. | 43 | 62 |
| Pseudomonas syringae pv. syringae B728a | Psyr_4265 | | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) | insig. | 44 | 61 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_4265 | | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) | insig. | 44 | 61 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5083 | | Serine hydroxymethyltransferase (EC 2.1.2.1) | sig. | 44 | 61 |
| Ralstonia solanacearum PSI07 | RPSI07_RS05100 | | bifunctional diguanylate cyclase/phosphodiesterase | insig. | 41 | 68 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_15730 | | diguanylate phosphodiesterase | insig. | 44 | 61 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4009 | | GGDEF domain protein | strong | 43 | 62 |
| Pseudomonas syringae pv. syringae B728a | Psyr_0086 | | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) | insig. | 42 | 62 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0086 | | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) | insig. | 42 | 62 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4790 | | sensory box/GGDEF domain/EAL domain protein | sig. | 45 | 62 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_10695 | | diguanylate cyclase | strong | 42 | 62 |
| Pseudomonas sp. RS175 | PFR28_04079 | | Membrane-bound lytic murein transglycosylase F | insig. | 44 | 62 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_11530 | | diguanylate cyclase | strong | 43 | 62 |
| Lysobacter sp. OAE881 | ABIE51_RS17335 | | EAL domain-containing protein | insig. | 44 | 60 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_14025 | | diguanylate phosphodiesterase | strong | 44 | 61 |
| Rhodospirillum rubrum S1H | Rru_A1805 | | Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) | cofit | 44 | 61 |
| Ralstonia solanacearum GMI1000 | RS_RS22415 | | bifunctional diguanylate cyclase/phosphodiesterase | insig. | 43 | 64 |
| Magnetospirillum magneticum AMB-1 | AMB_RS15005 | | two-component system response regulator | insig. | 43 | 62 |
| Dechlorosoma suillum PS | Dsui_1531 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | cofit | 43 | 60 |
| Pseudomonas simiae WCS417 | PS417_24275 | | diguanylate phosphodiesterase | strong | 43 | 61 |
| Pseudomonas sp. S08-1 | OH686_08910 | | Phytochrome-like protein / Cph2 | cofit | 43 | 62 |
| Pseudomonas sp. S08-1 | OH686_07355 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | insig. | 45 | 62 |