| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Pseudomonas simiae WCS417 | PS417_00905 | | histidine kinase | insig. | 100 | 100 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS00920 | | response regulator | insig. | 92 | 100 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS00920 | | response regulator | insig. | 92 | 100 |
| o | Pseudomonas sp. DMC3 | GFF4254 | | hypothetical protein | cofit | 76 | 100 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_11515 | | histidine kinase | insig. | 75 | 100 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_493 | | response regulator | insig. | 74 | 100 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1732 | | response regulator | insig. | 74 | 100 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4012 | | response regulator | insig. | 68 | 100 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_10710 | | histidine kinase | insig. | 68 | 100 |
| o | Pseudomonas sp. RS175 | PFR28_04757 | | Regulator of RpoS | insig. | 66 | 100 |
| o | Pseudomonas sp. SVBP6 | COO64_RS12485 | | response regulator | insig. | 66 | 100 |
| o | Pseudomonas putida KT2440 | PP_0215 | | Response regulator | insig. | 61 | 98 |
| o | Pseudomonas sp. BP01 | JOY50_RS18505 | | response regulator | insig. | 61 | 100 |
| o | Pseudomonas syringae pv. syringae B728a | Psyr_0089 | | Response regulator receiver | insig. | 58 | 100 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0089 | | Response regulator receiver | insig. | 58 | 100 |
| o | Pseudomonas aeruginosa PUPa3 | DQ20_RS38010 | | response regulator | sig. | 54 | 95 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS21280 | | HDOD domain-containing protein | sig. | 54 | 95 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_24125 | | histidine kinase | strong | 54 | 95 |
| o | Pseudomonas sp. S08-1 | OH686_11885 | | Response regulator | insig. | 49 | 97 |
| o | Pseudomonas stutzeri RCH2 | Psest_4236 | | Predicted signal transduction protein | insig. | 41 | 95 |
| o | Marinobacter adhaerens HP15 | HP15_3428 | | response regulator receiver protein | strong | 30 | 89 |
| | Pseudomonas sp. SVBP6 | COO64_RS01690 | | response regulator | insig. | 35 | 31 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_00078 | | Protein-glutamate methylesterase/protein-glutamine glutaminase | cofit | 34 | 30 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4070 | | Phosphate regulon transcriptional regulatory protein PhoB (SphR) | insig. | 33 | 31 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_11020 | | chemotaxis protein CheY | insig. | 33 | 31 |
| | Pseudomonas sp. RS175 | PFR28_04484 | | Protein-glutamate methylesterase/protein-glutamine glutaminase | no data | 33 | 31 |
| | Pseudomonas simiae WCS417 | PS417_28060 | | chemotaxis protein CheY | no data | 33 | 29 |
| | Pseudomonas orientalis W4I3 | QF045_RS02415 | | response regulator | cofit | 31 | 29 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS29745 | | response regulator | insig. | 33 | 29 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS29745 | | response regulator | sig. | 33 | 29 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_09880 | | chemotaxis protein CheY | insig. | 32 | 31 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2040 | | Phosphate regulon transcriptional regulatory protein PhoB (SphR) | no data | 32 | 31 |
| | Pseudomonas sp. DMC3 | GFF474 | | Protein-glutamate methylesterase/protein-glutamine glutaminase | cofit | 32 | 31 |
| | Pseudomonas stutzeri RCH2 | Psest_3850 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | insig. | 33 | 31 |
| | Pseudomonas segetis P6 | ACVTMO_RS00580 | | response regulator | insig. | 34 | 31 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_758 | | Phosphate regulon transcriptional regulatory protein PhoB (SphR) | insig. | 31 | 31 |
| | Pseudomonas sp. BP01 | JOY50_RS08880 | | response regulator | insig. | 33 | 31 |
| | Pseudomonas putida KT2440 | PP_5324 | | Response regulator | insig. | 33 | 31 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS12715 | | response regulator | insig. | 33 | 30 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_26635 | | two-component system response regulator | insig. | 33 | 30 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS49415 | | response regulator | insig. | 33 | 30 |
| | Marinobacter adhaerens HP15 | HP15_3356 | | response regulator receiver protein | insig. | 34 | 29 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_5036 | | Response regulator receiver | insig. | 35 | 31 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_5036 | | Response regulator receiver | sig. | 35 | 31 |
| | Pseudomonas sp. S08-1 | OH686_23615 | | Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY | insig. | 39 | 21 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS17710 | | response regulator | cofit | 34 | 27 |
| | Pseudomonas sp. S08-1 | OH686_13435 | | Phosphate regulon transcriptional regulatory protein PhoB (SphR) | insig. | 30 | 33 |
| | Shewanella oneidensis MR-1 | SO4647 | | DNA-binding response regulator (NCBI ptt file) | insig. | 37 | 30 |
| | Shewanella sp. ANA-3 | Shewana3_4025 | | two component transcriptional regulator (RefSeq) | insig. | 38 | 30 |
| | Pseudomonas orientalis W4I3 | QF045_RS18120 | | response regulator transcription factor | cofit | 35 | 30 |
| | Azospirillum brasilense Sp245 | AZOBR_RS07695 | | hypothetical protein | no data | 32 | 29 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS06935 | | phosphate regulon transcriptional regulatory protein PhoB | insig. | 33 | 31 |
| | Rhodospirillum rubrum S1H | Rru_A2837 | | Response regulator receiver domain protein (CheY) (NCBI) | insig. | 33 | 27 |
| | Shewanella amazonensis SB2B | Sama_3157 | | response regulator receiver protein (RefSeq) | insig. | 29 | 30 |
| | Rhodopseudomonas palustris CGA009 | TX73_018505 | | response regulator | insig. | 33 | 39 |
| | Azospirillum sp. SherDot2 | MPMX19_03749 | | KDP operon transcriptional regulatory protein KdpE | insig. | 37 | 29 |
| | Pseudomonas putida KT2440 | PP_3730 | | Transcriptional regulatory protein AruR | insig. | 38 | 30 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_02648 | | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein | cofit | 32 | 23 |
| | Pseudomonas simiae WCS417 | PS417_16365 | | transcriptional regulator | no data | 34 | 30 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS14895 | | response regulator | insig. | 29 | 32 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS05860 | | response regulator | insig. | 32 | 22 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS11185 | | response regulator | insig. | 32 | 22 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS08430 | | response regulator | insig. | 32 | 22 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_05479 | | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein | insig. | 31 | 22 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_00493 | | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein | insig. | 29 | 30 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS04855 | | response regulator | cofit | 34 | 28 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS12625 | | hybrid sensor histidine kinase/response regulator transcription factor | strong | 33 | 23 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03600 | | Transcriptional regulatory protein BaeR | cofit | 32 | 30 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS11775 | | response regulator | sig. | 31 | 30 |
| | Xanthobacter sp. DMC5 | GFF4475 | | Chemotaxis protein CheY | insig. | 29 | 29 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03107 | | two component transcriptional regulator, LuxR family | no data | 36 | 27 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_00787 | | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein | insig. | 26 | 30 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT0981 | | two-component system sensor histidine kinase/response regulator, hybrid ('one component system') (NCBI ptt file) | insig. | 26 | 30 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_4245 | | Transcriptional regulatory protein ompR | insig. | 35 | 32 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0823 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | insig. | 33 | 28 |
| | Methylophilus sp. DMC18 | GFF2576 | | Phosphate regulon transcriptional regulatory protein PhoB | cofit | 32 | 30 |
| | Bosea sp. OAE506 | ABIE41_RS23275 | | response regulator | insig. | 29 | 27 |
| | Azospirillum sp. SherDot2 | MPMX19_01605 | | Chemotaxis protein CheY | cofit | 31 | 27 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS17305 | | hybrid sensor histidine kinase/response regulator transcription factor | insig. | 28 | 31 |
| | Paraburkholderia graminis OAS925 | ABIE53_005703 | | two-component system copper resistance phosphate regulon response regulator CusR | sig. | 34 | 30 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT1635 | | two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) | insig. | 29 | 31 |
| | Paraburkholderia graminis OAS925 | ABIE53_004191 | | DNA-binding NarL/FixJ family response regulator | strong | 34 | 33 |
| | Pseudomonas sp. BP01 | JOY50_RS08135 | | response regulator | insig. | 37 | 30 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT4663 | | two-component system sensor histidine kinase/response (NCBI ptt file) | strong | 31 | 22 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT3172 | | two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) | insig. | 28 | 43 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS08595 | | Hpt domain-containing protein | strong | 40 | 22 |
| | Klebsiella michiganensis M5al | BWI76_RS09490 | | DNA-binding response regulator | sig. | 38 | 21 |
| | Azospirillum brasilense Sp245 | AZOBR_RS23980 | | Fis family transcriptional regulator | insig. | 36 | 29 |
| | Rhodospirillum rubrum S1H | Rru_A1282 | | Two component Transcriptional regulator, Winged helix family (NCBI) | insig. | 33 | 29 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS03320 | | EAL domain-containing protein | insig. | 28 | 30 |
| | Azospirillum brasilense Sp245 | AZOBR_RS12415 | | chemotaxis protein CheY | strong | 30 | 27 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_2375 | | Response regulator receiver:Transcriptional regulatory protein, C-terminal | insig. | 35 | 23 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2375 | | Response regulator receiver:Transcriptional regulatory protein, C-terminal | insig. | 35 | 23 |
| | Dechlorosoma suillum PS | Dsui_1261 | | response regulator containing a CheY-like receiver domain and a GGDEF domain | cofit | 30 | 30 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS05130 | | response regulator | insig. | 30 | 30 |
| | Pseudomonas putida KT2440 | PP_3454 | | putative transcriptional regulatory protein | strong | 34 | 30 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS16915 | | DNA-binding response regulator | insig. | 33 | 30 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_1292 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | strong | 31 | 29 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_04371 | | response regulator receiver domain protein | insig. | 30 | 30 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS07305 | | hybrid sensor histidine kinase/response regulator transcription factor | insig. | 28 | 36 |