Homologs of GFF1569 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

CsiR, transcriptional repressor of CsiD
SEED: CsiR, transcriptional repressor of CsiD

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1569 CsiR, transcriptional repressor of CsiD insig. 100 100
o Escherichia coli BL21 ECD_02520 transcriptional repressor of csiD insig. 88 96
o Escherichia coli ECOR27 NOLOHH_12725 csiR DNA-binding transcriptional regulator CsiR cofit 88 96
o Escherichia coli ECRC100 OKFHMN_20900 csiR DNA-binding transcriptional regulator CsiR cofit 88 96
o Escherichia coli ECRC101 MCAODC_11420 csiR DNA-binding transcriptional regulator CsiR insig. 88 96
o Escherichia coli ECRC102 NIAGMN_18665 csiR DNA-binding transcriptional regulator CsiR insig. 88 96
o Escherichia coli ECRC62 BNILDI_11285 csiR DNA-binding transcriptional regulator CsiR cofit 88 96
o Escherichia coli ECRC98 JDDGAC_24560 csiR DNA-binding transcriptional regulator CsiR insig. 88 96
o Escherichia coli ECRC99 KEDOAH_07240 csiR DNA-binding transcriptional regulator CsiR no data 88 96
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01068 hypothetical protein insig. 88 96
o Escherichia coli BW25113 b2664 ygaE putative transcriptional regulator (VIMSS) strong 88 96
o Escherichia coli ECOR38 HEPCGN_20165 csiR DNA-binding transcriptional regulator CsiR insig. 87 96
o Escherichia coli Nissle 1917 ECOLIN_RS14855 DNA-binding transcriptional regulator CsiR insig. 87 96
o Escherichia fergusonii Becca EFB2_01266 HTH-type transcriptional repressor GlaR insig. 87 96
o Pseudomonas sp. BP01 JOY50_RS27370 csiR DNA-binding transcriptional regulator CsiR insig. 61 96
o Pseudomonas putida KT2440 PP_2908 DNA-binding transcriptional repressor strong 61 96
o Pseudomonas fluorescens FW300-N2E3 AO353_24300 transcriptional regulator insig. 34 98
o Rhodopseudomonas palustris CGA009 TX73_017825 FCD domain-containing protein insig. 39 87
o Serratia liquefaciens MT49 IAI46_12455 FCD domain-containing protein insig. 37 89
o Pseudomonas fluorescens FW300-N2C3 AO356_29960 GntR family transcriptional regulator no data 38 87
o Variovorax sp. OAS795 ABID97_RS29370 FCD domain-containing protein no data 36 93
o Variovorax sp. SCN45 GFF1053 no description insig. 35 89
o Bosea sp. OAE506 ABIE41_RS20215 GntR family transcriptional regulator insig. 32 93
  Rhodopseudomonas palustris CGA009 TX73_021615 FCD domain-containing protein insig. 33 87
o Dinoroseobacter shibae DFL-12 Dshi_0960 transcriptional regulator, GntR family (RefSeq) insig. 32 88
o Phaeobacter inhibens DSM 17395 PGA1_c28300 transcriptional regulator, GntR family insig. 33 81
o Xanthobacter sp. DMC5 GFF2871 HTH-type transcriptional repressor GlaR sig. 34 72
  Bosea sp. OAE506 ABIE41_RS19155 GntR family transcriptional regulator insig. 30 91
o Pseudomonas simiae WCS417 PS417_21085 GntR family transcriptional regulator insig. 32 92
o Pseudomonas syringae pv. syringae B728a Psyr_2084 transcriptional regulator, GntR family sig. 32 88
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2084 transcriptional regulator, GntR family insig. 32 88
o Pseudomonas stutzeri RCH2 Psest_2322 Transcriptional regulators insig. 31 88
o Pseudomonas fluorescens SBW25 PFLU_RS22695 GntR family transcriptional regulator insig. 31 92
o Pseudomonas fluorescens SBW25-INTG PFLU_RS22695 GntR family transcriptional regulator strong 31 92
o Pseudomonas sp. SVBP6 COO64_RS09895 GntR family transcriptional regulator insig. 31 88
  Pseudomonas fluorescens FW300-N2E3 AO353_00905 GntR family transcriptional regulator sig. 31 88
  Pseudomonas putida KT2440 PP_2333 GntR family transcriptional regulator strong 30 88
o Pseudomonas sp. S08-1 OH686_01695 Propionate catabolism operon transcriptional regulator of GntR family cofit 31 88
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3818 Propionate catabolism operon transcriptional regulator of GntR family [predicted] insig. 31 88
  Pseudomonas sp. BP01 JOY50_RS25755 GntR family transcriptional regulator insig. 28 93
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_6060 Propionate catabolism operon transcriptional regulator of GntR family [predicted] strong 31 88
o Pseudomonas sp. DMC3 GFF5229 HTH-type transcriptional repressor GlaR insig. 31 88
  Pseudomonas fluorescens FW300-N2C3 AO356_20860 GntR family transcriptional regulator insig. 31 88
o Pseudomonas aeruginosa PA14 IKLFDK_03450 GntR family transcriptional regulator insig. 31 88
o Pseudomonas sp. RS175 PFR28_02929 HTH-type transcriptional repressor GlaR sig. 31 88
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4119 Propionate catabolism operon transcriptional regulator of GntR family [predicted] sig. 30 88
  Dechlorosoma suillum PS Dsui_0416 transcriptional regulator no data 30 90
  Shewanella amazonensis SB2B Sama_3293 GntR family transcriptional regulator (RefSeq) insig. 32 87
  Pseudomonas fluorescens SBW25 PFLU_RS20040 GntR family transcriptional regulator insig. 28 93
  Pseudomonas fluorescens SBW25-INTG PFLU_RS20040 GntR family transcriptional regulator sig. 28 93
  Pseudomonas simiae WCS417 PS417_18135 GntR family transcriptional regulator no data 27 93
  Azospirillum sp. SherDot2 MPMX19_04543 hypothetical protein no data 30 83
  Bosea sp. OAE506 ABIE41_RS18525 GntR family transcriptional regulator insig. 28 92
o Castellaniella sp019104865 MT123 ABCV34_RS13490 GntR family transcriptional regulator insig. 31 87
  Xanthobacter sp. DMC5 GFF2581 HTH-type transcriptional repressor GlaR insig. 29 88
  Pseudomonas fluorescens FW300-N2E3 AO353_14930 GntR family transcriptional regulator insig. 29 88
  Xanthobacter sp. DMC5 GFF3017 HTH-type transcriptional repressor RspR no data 32 88
  Rhodopseudomonas palustris CGA009 TX73_007535 GntR family transcriptional regulator insig. 30 88
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4256.1 Transcriptional regulator for ferulate or vanillate catabolism insig. 31 88
o Burkholderia phytofirmans PsJN BPHYT_RS07325 GntR family transcriptional regulator insig. 30 93
  Azospirillum brasilense Sp245 AZOBR_RS22370 transcriptional regulator insig. 29 90
o Shewanella loihica PV-4 Shew_0280 GntR family transcriptional regulator (RefSeq) insig. 30 87
  Azospirillum sp. SherDot2 MPMX19_02842 HTH-type transcriptional repressor RspR insig. 28 88
  Variovorax sp. OAS795 ABID97_RS26360 GntR family transcriptional regulator no data 26 80
  Cupriavidus basilensis FW507-4G11 RR42_RS05165 GntR family transcriptional regulator strong 31 86
  Bosea sp. OAE506 ABIE41_RS12215 GntR family transcriptional regulator insig. 31 92
  Marinobacter adhaerens HP15 HP15_1933 transcriptional regulator, GntR family insig. 30 90
  Herbaspirillum seropedicae SmR1 HSERO_RS13485 AsnC family transcriptional regulator no data 30 82
  Rhizobium sp. OAE497 ABIE40_RS23240 FCD domain-containing protein insig. 27 81
  Shewanella sp. ANA-3 Shewana3_3824 GntR family transcriptional regulator (RefSeq) strong 29 87
  Xanthobacter sp. DMC5 GFF4299 HTH-type transcriptional repressor RspR insig. 28 89
  Phaeobacter inhibens DSM 17395 PGA1_c36300 HTH-type transcriptional regulator, GntR family sig. 28 88
  Cupriavidus basilensis FW507-4G11 RR42_RS32580 GntR family transcriptional regulator insig. 27 91
  Cupriavidus basilensis FW507-4G11 RR42_RS07965 GntR family transcriptional regulator insig. 27 88
  Variovorax sp. SCN45 GFF3755 Transcriptional regulator, GntR family cofit 27 82
  Paraburkholderia graminis OAS925 ABIE53_004689 DNA-binding GntR family transcriptional regulator sig. 32 85
  Burkholderia phytofirmans PsJN BPHYT_RS34445 GntR family transcriptional regulator insig. 31 85
  Paraburkholderia sabiae LMG 24235 QEN71_RS17000 GntR family transcriptional regulator sig. 31 85
  Ralstonia sp. UNC404CL21Col ABZR87_RS08175 GntR family transcriptional regulator insig. 29 88
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03567 transcriptional regulator, GntR family sig. 30 85
  Pseudomonas sp. RS175 PFR28_01914 HTH-type transcriptional repressor RspR strong 26 89
  Paraburkholderia sabiae LMG 24235 QEN71_RS09485 GntR family transcriptional regulator strong 28 87
  Bosea sp. OAE506 ABIE41_RS06650 GntR family transcriptional regulator insig. 27 86
  Paraburkholderia sabiae LMG 24235 QEN71_RS07670 GntR family transcriptional regulator insig. 28 87
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF463 Transcriptional regulator, GntR family insig. 28 89
  Phaeobacter inhibens DSM 17395 PGA1_c02500 transcriptional regulator, GntR family insig. 27 88
  Herbaspirillum seropedicae SmR1 HSERO_RS11430 GntR family transcriptional regulator insig. 27 88
  Pseudomonas fluorescens FW300-N2C3 AO356_28640 GntR family transcriptional regulator insig. 26 91
  Pseudomonas aeruginosa PA14 IKLFDK_06015 GntR family transcriptional regulator insig. 27 88
  Bosea sp. OAE506 ABIE41_RS02250 GntR family transcriptional regulator insig. 25 87
  Agrobacterium fabrum C58 Atu1419 transcriptional regulator, GntR family strong 30 74
  Sinorhizobium meliloti 1021 SMa0160 GntR family transcriptional regulator insig. 30 87
  Shewanella sp. ANA-3 Shewana3_1582 GntR family transcriptional regulator (RefSeq) insig. 28 93
  Xanthobacter sp. DMC5 GFF2533 HTH-type transcriptional repressor RspR insig. 28 89
  Burkholderia phytofirmans PsJN BPHYT_RS23045 AsnC family transcriptional regulator no data 33 69
  Sinorhizobium meliloti 1021 SM_b20773 GntR family transcriptional regulator strong 30 87
  Shewanella oneidensis MR-1 SO0346 transcriptional regulator. GntR family (NCBI ptt file) cofit 28 87
  Rhizobium sp. OAE497 ABIE40_RS23190 FCD domain-containing protein cofit 28 91
  Shewanella oneidensis MR-1 SO2852 transcriptional regulator, GntR family (NCBI ptt file) sig. 28 93
  Paraburkholderia graminis OAS925 ABIE53_002671 DNA-binding GntR family transcriptional regulator insig. 28 90