Homologs of PS417_00665 from Pseudomonas simiae WCS417

RND transporter
SEED: Outer membrane component of tripartite multidrug resistance system

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_00665 RND transporter strong 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS00675 efflux transporter outer membrane subunit insig. 95 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS00675 efflux transporter outer membrane subunit insig. 95 100
o Pseudomonas orientalis W4I3 QF045_RS03645 efflux transporter outer membrane subunit insig. 95 99
o Pseudomonas lactucae CFBP13502 GEMAOFIL_00339 putative efflux pump outer membrane protein TtgC cofit 94 100
o Pseudomonas fluorescens FW300-N2E3 AO353_11235 RND transporter insig. 84 98
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1678 Outer membrane component of tripartite multidrug resistance system insig. 85 98
o Pseudomonas sp. DMC3 GFF4274 putative efflux pump outer membrane protein TtgC cofit 85 98
o Pseudomonas fluorescens GW456-L13 PfGW456L13_524 Outer membrane component of tripartite multidrug resistance system insig. 83 99
o Pseudomonas sp. RS175 PFR28_04798 putative efflux pump outer membrane protein TtgC insig. 80 97
o Pseudomonas sp. BP01 JOY50_RS15420 efflux transporter outer membrane subunit insig. 68 95
o Pseudomonas sp. SVBP6 COO64_RS11485 efflux transporter outer membrane subunit strong 67 96
o Pseudomonas putida KT2440 PP_1273 putative Multidrug efflux MFS outer membrane protein sig. 67 95
o Pseudomonas aeruginosa PUPa3 DQ20_RS32785 efflux transporter outer membrane subunit insig. 56 98
o Pseudomonas aeruginosa MRSN321 DY961_RS02810 efflux transporter outer membrane subunit insig. 56 98
o Pseudomonas aeruginosa PA14 IKLFDK_14410 RND transporter insig. 55 98
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00347 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family insig. 46 98
o Burkholderia phytofirmans PsJN BPHYT_RS10540 secretion protein insig. 47 100
  Burkholderia phytofirmans PsJN BPHYT_RS08385 secretion protein insig. 46 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS38300 efflux transporter outer membrane subunit insig. 46 96
o Paraburkholderia graminis OAS925 ABIE53_002589 NodT family efflux transporter outer membrane factor (OMF) lipoprotein insig. 46 97
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4169 Outer membrane component of tripartite multidrug resistance system insig. 45 98
o Ralstonia solanacearum PSI07 RPSI07_RS03425 multidrug transporter insig. 44 95
o Ralstonia solanacearum GMI1000 RS_RS19280 TolC family protein insig. 45 95
  Paraburkholderia sabiae LMG 24235 QEN71_RS09280 efflux transporter outer membrane subunit insig. 38 97
o Rahnella sp. WP5 EX31_RS10805 efflux transporter outer membrane subunit insig. 37 97
o Erwinia tracheiphila SCR3 LU632_RS09495 efflux transporter outer membrane subunit insig. 36 98
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS04165 efflux transporter outer membrane subunit cofit 38 95
o Enterobacter asburiae PDN3 EX28DRAFT_2165 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family cofit 36 98
o Pantoea sp. MT58 IAI47_13160 efflux transporter outer membrane subunit insig. 38 95
o Enterobacter sp. TBS_079 MPMX20_01451 Toluene efflux pump outer membrane protein TtgI insig. 36 98
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_19970 RND transporter cofit 35 98
o Erwinia amylovora T8 OLJFJH_16410 RND transporter insig. 36 97
o Desulfovibrio vulgaris Miyazaki F DvMF_2159 RND efflux system, outer membrane lipoprotein, NodT family (RefSeq) insig. 37 96
o Desulfovibrio vulgaris Hildenborough JW710 DVU3246 RND efflux system, outer membrane protein, NodT family (TIGR) insig. 36 95
  Rhodanobacter sp. FW510-T8 OKGIIK_14960 tolC RND transporter insig. 35 95
o Xanthobacter sp. DMC5 GFF2163 Toluene efflux pump outer membrane protein TtgI insig. 32 97
  Desulfovibrio vulgaris Miyazaki F DvMF_0034 RND efflux system, outer membrane lipoprotein, NodT family (RefSeq) insig. 36 96
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01876 outer membrane protein, multidrug efflux system insig. 34 97
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4863 Outer membrane protein OprN sig. 35 96
  Pseudomonas syringae pv. syringae B728a Psyr_2969 RND efflux system, outer membrane lipoprotein, NodT sig. 34 96
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2969 RND efflux system, outer membrane lipoprotein, NodT strong 34 96
  Rhodanobacter denitrificans MT42 LRK55_RS07895 TolC family protein insig. 35 95
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS08145 TolC family protein insig. 35 95
  Variovorax sp. SCN45 GFF3508 Multidrug efflux system, outer membrane factor lipoprotein => OpmD of MexHI-OpmD system sig. 35 97
  Castellaniella sp019104865 MT123 ABCV34_RS04220 efflux transporter outer membrane subunit no data 35 98
  Paraburkholderia graminis OAS925 ABIE53_005789 multidrug efflux system outer membrane protein insig. 33 96
  Pseudomonas putida KT2440 PP_3427 Multidrug efflux RND outer membrane protein OprN sig. 34 95
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3059 Outer membrane protein OprN sig. 34 96
  Pseudomonas sp. BP01 JOY50_RS24355 efflux transporter outer membrane subunit insig. 34 95
  Pseudomonas sp. DMC3 GFF2879 Outer membrane protein OprM cofit 34 96
  Pseudomonas fluorescens GW456-L13 PfGW456L13_689 RND efflux system, outer membrane lipoprotein, NodT insig. 34 98
  Cupriavidus basilensis FW507-4G11 RR42_RS27690 RND transporter insig. 34 98
  Pseudomonas sp. SVBP6 COO64_RS25175 efflux transporter outer membrane subunit insig. 33 94
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_823 Outer membrane protein OprN strong 35 96
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01395 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family insig. 34 96
  Pseudomonas segetis P6 ACVTMO_RS11945 efflux transporter outer membrane subunit insig. 34 94
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS15395 efflux transporter outer membrane subunit cofit 33 98
  Paraburkholderia sabiae LMG 24235 QEN71_RS03460 efflux transporter outer membrane subunit insig. 32 98
  Pseudomonas syringae pv. syringae B728a Psyr_2485 RND efflux system, outer membrane lipoprotein, NodT strong 32 97
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2485 RND efflux system, outer membrane lipoprotein, NodT cofit 32 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS09200 efflux transporter outer membrane subunit insig. 32 96
  Bacteroides stercoris CC31F HMPREF1181_RS14280 efflux transporter outer membrane subunit insig. 31 88
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4831 Outer membrane protein assembly factor YaeT precursor insig. 34 95
  Paraburkholderia sabiae LMG 24235 QEN71_RS35030 efflux transporter outer membrane subunit strong 30 96
  Pseudomonas sp. RS175 PFR28_01727 Outer membrane protein OprM insig. 35 94
  Pseudomonas fluorescens SBW25 PFLU_RS19585 AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor insig. 34 97
  Pseudomonas fluorescens SBW25-INTG PFLU_RS19585 AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor sig. 34 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS32970 efflux transporter outer membrane subunit insig. 36 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS37935 efflux transporter outer membrane subunit insig. 34 94
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02799 Outer membrane protein OprM cofit 33 96
  Pseudomonas putida KT2440 PP_2819 Outer membrane protein OprJ insig. 35 98
  Pseudomonas orientalis W4I3 QF045_RS16765 TolC family protein cofit 35 98
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3475.1 RND efflux system, outer membrane lipoprotein CmeC insig. 36 94
  Pseudomonas fluorescens FW300-N2E3 AO353_23955 RND transporter sig. 36 98
  Pseudomonas sp. DMC3 GFF3505 Outer membrane protein OprM insig. 33 98
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3264 Heavy metal RND efflux outer membrane protein, CzcC family insig. 33 98
  Pseudomonas stutzeri RCH2 Psest_2141 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family strong 33 96
  Desulfovibrio vulgaris Hildenborough JW710 DVU0062 RND efflux system, outer membrane protein, NodT family (TIGR) strong 32 98
  Lysobacter sp. OAE881 ABIE51_RS10130 efflux transporter outer membrane subunit insig. 31 99
  Pseudomonas fluorescens SBW25 PFLU_RS14255 TolC family protein insig. 35 98
  Pseudomonas fluorescens SBW25-INTG PFLU_RS14255 TolC family protein sig. 35 98
  Bosea sp. OAE506 ABIE41_RS01590 efflux transporter outer membrane subunit insig. 32 97
  Bacteroides ovatus ATCC 8483 BACOVA_02605 efflux transporter, outer membrane factor lipoprotein, NodT family sig. 31 88
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03224 Outer membrane protein OprM cofit 35 96
  Pseudomonas segetis P6 ACVTMO_RS11925 efflux transporter outer membrane subunit cofit 32 94
  Pseudomonas aeruginosa MRSN321 DY961_RS05015 opmB;inference=COORDINATES multidrug efflux RND transporter outer membrane subunit OpmB insig. 32 95
  Pseudomonas fluorescens FW300-N2C3 AO356_27610 RND transporter insig. 34 94
  Pseudomonas simiae WCS417 PS417_12755 RND transporter sig. 32 96
  Pseudomonas aeruginosa PA14 IKLFDK_12410 multidrug efflux RND transporter outer membrane subunit OpmB sig. 32 95
  Pseudomonas syringae pv. syringae B728a Psyr_2606 RND efflux system, outer membrane lipoprotein, NodT insig. 32 97
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2606 RND efflux system, outer membrane lipoprotein, NodT insig. 32 97
  Pseudomonas fluorescens SBW25 PFLU_RS13440 efflux transporter outer membrane subunit insig. 32 98
  Pseudomonas fluorescens SBW25-INTG PFLU_RS13440 efflux transporter outer membrane subunit sig. 32 98
  Pseudomonas simiae WCS417 PS417_13185 RND transporter insig. 34 98
  Agrobacterium fabrum C58 Atu2552 nodulation protein T precursor no data 32 97
  Pseudomonas sp. S08-1 OH686_01000 Multidrug efflux system, outer membrane factor lipoprotein cofit 35 96
  Bacteroides thetaiotaomicron VPI-5482 BT0884 outer membrane efflux protein oprM precursor (NCBI ptt file) strong 31 88
  Phocaeicola dorei CL03T12C01 ABI39_RS18730 efflux transporter outer membrane subunit insig. 28 95
  Pectobacterium carotovorum WPP14 HER17_RS07525 efflux transporter outer membrane subunit cofit 32 96