| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_0782 | | Uncharacterized membrane protein (homolog of Drosophila rhomboid) | sig. | 100 | 100 |
| o | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_13295 | | rhomboid family intramembrane serine protease | strong | 47 | 97 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS00370 | | rhomboid family intramembrane serine protease | cofit | 43 | 92 |
| o | Bacteroides ovatus ATCC 8483 | BACOVA_02080 | | peptidase, S54 family | strong | 39 | 97 |
| o | Bacteroides stercoris CC31F | HMPREF1181_RS01115 | | rhomboid family intramembrane serine protease | sig. | 40 | 97 |
| o | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS17210 | | rhomboid family intramembrane serine protease | strong | 40 | 95 |
| o | Bacteroides thetaiotaomicron VPI-5482 | BT2832 | | rhomboid family protein (NCBI ptt file) | no data | 37 | 97 |
| o | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS10490 | | rhomboid family intramembrane serine protease | strong | 40 | 99 |
| o | Phocaeicola dorei CL03T12C01 | ABI39_RS06630 | | rhomboid family intramembrane serine protease | sig. | 40 | 99 |
| o | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS11620 | | rhomboid family intramembrane serine protease | strong | 38 | 97 |
| o | Cellulophaga baltica 18 | M666_RS11085 | | rhomboid family intramembrane serine protease | no data | 35 | 92 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS00375 | | rhomboid family intramembrane serine protease | strong | 30 | 69 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.1919.1 | | FIG056164: rhomboid family serine protease | sig. | 30 | 50 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT2831 | | rhomboid family protein (NCBI ptt file) | no data | 31 | 49 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_02079 | | peptidase, S54 family | insig. | 32 | 50 |
| | Lysobacter sp. OAE881 | ABIE51_RS06600 | | rhomboid family intramembrane serine protease | cofit | 30 | 69 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS01110 | | rhomboid family intramembrane serine protease | no data | 29 | 48 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS10495 | | rhomboid family intramembrane serine protease | sig. | 30 | 51 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_13300 | | rhomboid family intramembrane serine protease | sig. | 26 | 64 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS17205 | | rhomboid family intramembrane serine protease | strong | 27 | 49 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS06625 | | rhomboid family intramembrane serine protease | sig. | 30 | 51 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS11625 | | rhomboid family intramembrane serine protease | sig. | 29 | 49 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS19180 | | rhomboid family intramembrane serine protease | insig. | 32 | 50 |
| | Ralstonia solanacearum UW163 | UW163_RS19950 | | rhomboid family intramembrane serine protease | insig. | 32 | 50 |
| | Ralstonia solanacearum GMI1000 | RS_RS21940 | | rhomboid family intramembrane serine protease | insig. | 30 | 50 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU1023 | | rhomboid family protein (TIGR) | insig. | 27 | 67 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_0781 | | Uncharacterized membrane protein (homolog of Drosophila rhomboid) | sig. | 44 | 18 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS04420 | | rhomboid family intramembrane serine protease | insig. | 29 | 45 |
| | Cellulophaga baltica 18 | M666_RS11080 | | rhomboid family intramembrane serine protease | no data | 25 | 50 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_0667 | | Uncharacterized membrane protein (homolog of Drosophila rhomboid) | insig. | 33 | 46 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS27555 | | peptidase | insig. | 33 | 44 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_04540 | | peptidase, S54 family | strong | 32 | 35 |
| | Xanthobacter sp. DMC5 | GFF4420 | | hypothetical protein | insig. | 24 | 75 |
| | Bifidobacterium breve UCC2003 | BBR_RS10575 | | rhomboid family intramembrane serine protease | insig. | 38 | 27 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.3516.1 | | GlpG protein (membrane protein of glp regulon) | insig. | 29 | 47 |
| | Dinoroseobacter shibae DFL-12 | Dshi_1200 | | Rhomboid family protein (RefSeq) | insig. | 29 | 46 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_19970 | | peptidase | insig. | 27 | 59 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS02645 | | rhomboid family intramembrane serine protease | strong | 29 | 42 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS02895 | | rhomboid family intramembrane serine protease | strong | 29 | 42 |
| | Acinetobacter baumannii LAC-4 | RR41_RS08870 | | rhomboid family intramembrane serine protease | insig. | 32 | 47 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS23805 | | hypothetical protein | insig. | 21 | 62 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS07095 | | rhomboid family intramembrane serine protease | insig. | 30 | 42 |
| | Acinetobacter radioresistens SK82 | MPMX26_02337 | | Rhomboid protease AarA | no data | 30 | 47 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_09875 | glpG | DUF1751 domain-containing protein | strong | 30 | 33 |
| | Shewanella amazonensis SB2B | Sama_0736 | | hypothetical protein (RefSeq) | insig. | 29 | 35 |
| | Kangiella aquimarina DSM 16071 | B158DRAFT_2032 | | Uncharacterized membrane protein (homolog of Drosophila rhomboid) | insig. | 31 | 28 |
| | Lysobacter sp. OAE881 | ABIE51_RS12740 | | rhomboid family intramembrane serine protease | insig. | 27 | 53 |
| | Rhodospirillum rubrum S1H | Rru_A3565 | | Rhomboid-like protein (NCBI) | insig. | 27 | 70 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_17410 | | hypothetical protein | insig. | 31 | 27 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT1807 | | conserved protein, with rhomboid family domain (NCBI ptt file) | sig. | 29 | 35 |
| | Agrobacterium fabrum C58 | Atu3594 | | hypothetical protein | insig. | 22 | 74 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS14560 | | rhomboid family intramembrane serine protease | insig. | 34 | 19 |
| | Shewanella oneidensis MR-1 | SO1000 | | rhomboid family protein (NCBI ptt file) | insig. | 27 | 27 |
| | Rhizobium sp. OAE497 | ABIE40_RS17495 | | rhomboid family intramembrane serine protease | insig. | 24 | 57 |
| | Shewanella sp. ANA-3 | Shewana3_4107 | | rhomboid family protein (RefSeq) | cofit | 24 | 60 |
| | Pectobacterium carotovorum WPP14 | HER17_RS01525 | | rhomboid family intramembrane serine protease GlpG | insig. | 22 | 61 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c11740 | | rhomboid protein-like protein | insig. | 24 | 73 |
| | Rhizobium sp. OAE497 | ABIE40_RS09740 | | rhomboid family intramembrane serine protease | cofit | 35 | 29 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS13900 | | rhomboid family intramembrane serine protease | sig. | 26 | 45 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF589 | | GlpG protein (membrane protein of glp regulon) | insig. | 38 | 21 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS09285 | | rhomboid family intramembrane serine protease | cofit | 27 | 55 |
| | Mycobacterium tuberculosis H37Rv | Rv0110 | | Probable conserved integral membrane protein | insig. | 30 | 66 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_03520 | glpG | rhomboid family intramembrane serine protease | cofit | 27 | 45 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS14410 | | rhomboid family intramembrane serine protease | strong | 25 | 45 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS14695 | | rhomboid family intramembrane serine protease | strong | 25 | 45 |
| | Sphingobium sp. HT1-2 | GFF2085 | | Rhomboid family protein | insig. | 24 | 63 |
| | Erwinia amylovora T8 | OLJFJH_04215 | | rhomboid family intramembrane serine protease GlpG | insig. | 22 | 60 |
| | Agrobacterium fabrum C58 | Atu1753 | | hypothetical protein | strong | 33 | 29 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_0781 | | Uncharacterized membrane protein (homolog of Drosophila rhomboid) | sig. | 29 | 27 |
| | Rhizobium sp. OAE497 | ABIE40_RS22145 | | rhomboid family intramembrane serine protease | insig. | 30 | 27 |
| | Shewanella amazonensis SB2B | Sama_0095 | | glpG protein (RefSeq) | insig. | 27 | 52 |
| | Escherichia coli BL21 | ECD_00624 | | hypothetical protein | insig. | 25 | 30 |
| | Ralstonia solanacearum GMI1000 | RS_RS24475 | | rhomboid family intramembrane serine protease | insig. | 25 | 69 |
| | Methylophilus sp. DMC18 | GFF1687 | | Rhomboid protease GluP | insig. | 31 | 28 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_11875 | glpG | rhomboid family intramembrane serine protease GlpG | cofit | 27 | 33 |
| | Erwinia tracheiphila SCR3 | LU632_RS23010 | glpG | rhomboid family intramembrane serine protease GlpG | sig. | 27 | 33 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS16590 | | rhomboid family intramembrane serine protease | insig. | 25 | 64 |
| | Ralstonia solanacearum UW163 | UW163_RS17945 | | rhomboid family intramembrane serine protease | insig. | 25 | 64 |
| | Acinetobacter baumannii LAC-4 | RR41_RS08825 | | rhomboid family intramembrane serine protease | insig. | 30 | 44 |
| | Pantoea sp. MT58 | IAI47_01760 | | rhomboid family intramembrane serine protease GlpG | insig. | 24 | 59 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0913 | | Rhomboid family protein (RefSeq) | insig. | 23 | 67 |
| | Enterobacter sp. TBS_079 | MPMX20_04307 | | Rhomboid protease GlpG | sig. | 27 | 35 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_07055 | | rhomboid family intramembrane serine protease GlpG | cofit | 36 | 16 |
| | Klebsiella pneumoniae MRSN742743 | KFA93_RS10080 | glpG;go_component=membrane|0016020||IEA;go_function=serine-type | rhomboid family intramembrane serine protease GlpG | sig. | 36 | 16 |
| | Shewanella loihica PV-4 | Shew_0702 | | rhomboid family protein (RefSeq) | insig. | 31 | 29 |
| | Escherichia coli ECRC62 | BNILDI_02785 | glpG | rhomboid family intramembrane serine protease GlpG | cofit | 27 | 36 |