Homologs of EX31_RS12950 from Rahnella sp. WP5

lysine decarboxylase LdcC
SEED: Lysine decarboxylase 2, constitutive (EC 4.1.1.18)
KEGG: lysine decarboxylase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Rahnella sp. WP5 EX31_RS12950 lysine decarboxylase LdcC cofit 100 100
o Serratia liquefaciens MT49 IAI46_20175 lysine decarboxylase LdcC insig. 85 100
o Pantoea sp. MT58 IAI47_15445 lysine decarboxylase LdcC cofit 81 99
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03477 Constitutive lysine decarboxylase insig. 78 99
o Escherichia coli BW25113 b0186 ldcC lysine decarboxylase 2, constitutive (NCBI) insig. 78 99
o Escherichia coli ECRC62 BNILDI_09200 ldcC lysine decarboxylase LdcC insig. 78 99
o Escherichia coli ECOR27 NOLOHH_02470 ldcC lysine decarboxylase LdcC cofit 78 99
o Escherichia coli BL21 ECD_00184 lysine decarboxylase 2, constitutive cofit 78 99
o Escherichia coli ECRC101 OKFHMN_10125 ldcC lysine decarboxylase LdcC insig. 78 99
o Escherichia coli ECRC101 MCAODC_00640 ldcC lysine decarboxylase LdcC insig. 78 99
o Escherichia coli ECRC102 NIAGMN_07975 ldcC lysine decarboxylase LdcC insig. 78 99
o Escherichia coli ECRC99 KEDOAH_18030 ldcC lysine decarboxylase LdcC no data 78 99
o Escherichia coli Nissle 1917 ECOLIN_RS01010 lysine decarboxylase LdcC insig. 78 99
o Escherichia fergusonii Becca EFB2_03858 Constitutive lysine decarboxylase insig. 78 99
o Escherichia coli ECRC98 JDDGAC_13720 ldcC lysine decarboxylase LdcC no data 78 99
o Escherichia coli ECOR38 HEPCGN_08080 ldcC lysine decarboxylase LdcC cofit 78 99
o Enterobacter asburiae PDN3 EX28DRAFT_3774 Arginine/lysine/ornithine decarboxylases insig. 78 99
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF35 Lysine decarboxylase 2, constitutive (EC 4.1.1.18) insig. 78 99
o Enterobacter sp. TBS_079 MPMX20_00870 Constitutive lysine decarboxylase insig. 78 99
o Klebsiella michiganensis M5al BWI76_RS05300 lysine decarboxylase LdcC insig. 76 99
  Serratia liquefaciens MT49 IAI46_20145 lysine decarboxylase CadA insig. 74 99
  Escherichia coli BL21 ECD_04002 lysine decarboxylase, acid-inducible insig. 73 99
  Escherichia coli ECOR27 NOLOHH_04740 cadA lysine decarboxylase CadA cofit 73 99
  Escherichia coli ECRC101 OKFHMN_12475 cadA lysine decarboxylase CadA insig. 73 99
  Escherichia coli ECRC101 MCAODC_02985 cadA lysine decarboxylase CadA insig. 73 99
  Escherichia coli ECRC102 NIAGMN_10320 cadA lysine decarboxylase CadA insig. 73 99
  Escherichia coli ECRC62 BNILDI_06750 cadA lysine decarboxylase CadA insig. 73 99
  Escherichia coli ECRC98 JDDGAC_16110 cadA lysine decarboxylase CadA no data 73 99
  Escherichia coli ECRC99 KEDOAH_15690 cadA lysine decarboxylase CadA no data 73 99
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03912 Inducible lysine decarboxylase insig. 73 99
  Escherichia coli BW25113 b4131 cadA lysine decarboxylase 1 (NCBI) sig. 73 99
  Klebsiella michiganensis M5al BWI76_RS07195 lysine decarboxylase CadA insig. 73 99
  Escherichia fergusonii Becca EFB2_04451 Inducible lysine decarboxylase insig. 73 99
  Escherichia coli ECOR38 HEPCGN_11110 cadA lysine decarboxylase CadA cofit 73 99
  Escherichia coli Nissle 1917 ECOLIN_RS23905 lysine decarboxylase CadA insig. 73 99
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2452 Lysine decarboxylase, inducible (EC 4.1.1.18) insig. 74 99
o Vibrio cholerae E7946 ATCC 55056 CSW01_01445 lysine decarboxylase cofit 68 99
o Rhizobium sp. OAE497 ABIE40_RS23760 Orn/Lys/Arg decarboxylase N-terminal domain-containing protein insig. 43 98
o Pseudomonas stutzeri RCH2 Psest_2075 Arginine/lysine/ornithine decarboxylases insig. 47 84
o Sinorhizobium meliloti 1021 SMa0682 decarboxylase (lysine, ornithine, arginine) insig. 42 98
o Pseudomonas fluorescens FW300-N2E3 AO353_23560 lysine decarboxylase insig. 45 87
o Pseudomonas fluorescens GW456-L13 PfGW456L13_3336 Lysine decarboxylase, inducible (EC 4.1.1.18) insig. 45 87
o Pseudomonas sp. S08-1 OH686_03560 Lysine decarboxylase, inducible cofit 44 85
o Pseudomonas fluorescens SBW25 PFLU_RS12930 lysine decarboxylase insig. 44 87
o Pseudomonas fluorescens SBW25-INTG PFLU_RS12930 lysine decarboxylase insig. 44 87
o Pseudomonas simiae WCS417 PS417_12240 lysine decarboxylase insig. 44 87
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4600 Lysine decarboxylase, inducible (EC 4.1.1.18) insig. 44 87
o Pseudomonas putida KT2440 PP_4140 lysine decarboxylase insig. 43 86
o Dechlorosoma suillum PS Dsui_1245 arginine/lysine/ornithine decarboxylase no data 40 96
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3776 Arginine decarboxylase (EC 4.1.1.19) / Ornithine decarboxylase (EC 4.1.1.17) insig. 38 95
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4333 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) sig. 39 97
o Herbaspirillum seropedicae SmR1 HSERO_RS17280 lysine decarboxylase no data 38 97
o Variovorax sp. OAS795 ABID97_RS16535 arginine/lysine/ornithine decarboxylase strong 38 97
o Variovorax sp. SCN45 GFF232 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) cofit 39 96
o Ralstonia solanacearum PSI07 RPSI07_RS13045 lysine decarboxylase no data 38 97
o Paraburkholderia graminis OAS925 ABIE53_001270 arginine decarboxylase no data 39 95
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS04325 lysine decarboxylase no data 38 95
o Ralstonia solanacearum UW163 UW163_RS09345 lysine decarboxylase no data 38 95
o Cupriavidus basilensis FW507-4G11 RR42_RS15940 lysine decarboxylase no data 38 95
o Ralstonia solanacearum GMI1000 RS_RS11875 lysine decarboxylase no data 37 97
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00160 ornithine decarboxylase no data 38 95
o Paraburkholderia sabiae LMG 24235 QEN71_RS25000 arginine/lysine/ornithine decarboxylase no data 40 92
o Burkholderia phytofirmans PsJN BPHYT_RS04980 lysine decarboxylase no data 38 95
o Ralstonia sp. UNC404CL21Col ABZR87_RS16180 arginine/lysine/ornithine decarboxylase strong 37 97
o Acidovorax sp. GW101-3H11 Ac3H11_2914 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) no data 37 96
o Castellaniella sp019104865 MT123 ABCV34_RS08900 arginine/lysine/ornithine decarboxylase no data 38 95
  Escherichia coli ECOR27 NOLOHH_04815 adiA arginine decarboxylase insig. 35 97
  Escherichia coli ECRC101 OKFHMN_12550 adiA arginine decarboxylase insig. 35 97
  Escherichia coli ECRC101 MCAODC_03060 adiA arginine decarboxylase insig. 35 97
  Escherichia coli ECRC102 NIAGMN_10395 adiA arginine decarboxylase insig. 35 97
  Escherichia coli ECRC62 BNILDI_06675 adiA arginine decarboxylase insig. 35 97
  Escherichia coli ECRC98 JDDGAC_16185 adiA arginine decarboxylase no data 35 97
  Escherichia coli ECRC99 KEDOAH_15615 adiA arginine decarboxylase no data 35 97
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03927 Biodegradative arginine decarboxylase insig. 35 97
  Escherichia coli BW25113 b4117 adiA biodegradative arginine decarboxylase (RefSeq) insig. 35 97
  Escherichia fergusonii Becca EFB2_04465 Biodegradative arginine decarboxylase insig. 35 97
  Escherichia coli ECOR38 HEPCGN_11185 adiA arginine decarboxylase cofit 35 97
  Escherichia coli Nissle 1917 ECOLIN_RS23825 arginine decarboxylase insig. 35 97
  Escherichia coli BL21 ECD_03988 arginine decarboxylase insig. 35 97
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1473 Arginine decarboxylase, catabolic (EC 4.1.1.19) insig. 35 97
  Azospirillum brasilense Sp245 AZOBR_RS27535 amino acid decarboxylase insig. 32 95
  Rhodopseudomonas palustris CGA009 TX73_010575 Orn/Lys/Arg decarboxylase N-terminal domain-containing protein insig. 32 93
  Magnetospirillum magneticum AMB-1 AMB_RS05630 amino acid decarboxylase insig. 31 95
  Azospirillum sp. SherDot2 MPMX19_05197 Inducible ornithine decarboxylase insig. 31 97
  Sinorhizobium meliloti 1021 SMa0680 amino acid (ornithine, lysine, arginine) decarboxylase insig. 31 89
  Rhizobium sp. OAE497 ABIE40_RS23765 ornithine decarboxylase insig. 30 90
  Paraburkholderia sabiae LMG 24235 QEN71_RS33025 ornithine decarboxylase insig. 30 90
  Shewanella sp. ANA-3 Shewana3_3871 ornithine decarboxylase (RefSeq) cofit 32 94
  Shewanella oneidensis MR-1 SO0314 speF ornithine decarboxylase, inducible (NCBI ptt file) cofit 32 94
  Vibrio cholerae E7946 ATCC 55056 CSW01_19405 ornithine decarboxylase SpeF insig. 33 85
  Enterobacter asburiae PDN3 EX28DRAFT_2285 ornithine decarboxylase SpeF insig. 32 89
  Erwinia tracheiphila SCR3 LU632_RS05390 ornithine decarboxylase strong 33 83
  Serratia liquefaciens MT49 IAI46_21480 ornithine decarboxylase SpeF insig. 34 81
  Pantoea sp. MT58 IAI47_03545 ornithine decarboxylase insig. 35 81
  Escherichia coli Nissle 1917 ECOLIN_RS16490 ornithine decarboxylase insig. 34 80
  Shewanella amazonensis SB2B Sama_3334 ornithine decarboxylase (RefSeq) cofit 34 84
  Escherichia fergusonii Becca EFB2_00937 Constitutive ornithine decarboxylase insig. 34 80
  Escherichia coli ECRC101 OKFHMN_19180 speC ornithine decarboxylase insig. 34 80
  Escherichia coli ECRC101 MCAODC_09700 speC ornithine decarboxylase insig. 34 80
  Escherichia coli ECRC102 NIAGMN_16945 speC ornithine decarboxylase insig. 34 80