Homologs of EX28DRAFT_3896 from Enterobacter asburiae PDN3

NAD-dependent DNA ligase (contains BRCT domain type II)
SEED: DNA ligase (EC 6.5.1.2), LigB
KEGG: DNA ligase (NAD+)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Enterobacter asburiae PDN3 EX28DRAFT_3896 NAD-dependent DNA ligase (contains BRCT domain type II) insig. 100 100
o Enterobacter sp. TBS_079 MPMX20_00089 DNA ligase B insig. 80 100
o Escherichia coli ECRC62 BNILDI_04065 ligB NAD-dependent DNA ligase LigB insig. 58 99
o Escherichia coli ECOR27 NOLOHH_07450 ligB NAD-dependent DNA ligase LigB insig. 58 99
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00054 DNA ligase B insig. 58 100
o Escherichia coli BW25113 b3647 yicF putative enzyme (VIMSS) insig. 58 99
o Escherichia coli ECRC100 OKFHMN_15570 ligB NAD-dependent DNA ligase LigB cofit 58 99
o Escherichia coli ECRC101 MCAODC_06080 ligB NAD-dependent DNA ligase LigB insig. 58 99
o Escherichia coli ECRC102 NIAGMN_13330 ligB NAD-dependent DNA ligase LigB cofit 58 99
o Escherichia coli ECRC98 JDDGAC_19195 ligB NAD-dependent DNA ligase LigB insig. 58 99
o Escherichia coli ECRC99 KEDOAH_12575 ligB NAD-dependent DNA ligase LigB no data 58 99
o Escherichia coli BL21 ECD_03504 DNA ligase, NAD(+)-dependent insig. 58 100
o Escherichia coli ECOR38 HEPCGN_14390 ligB NAD-dependent DNA ligase LigB insig. 58 100
o Klebsiella michiganensis M5al BWI76_RS27410 DNA ligase B insig. 58 99
o Escherichia fergusonii Becca EFB2_00141 DNA ligase B insig. 58 100
o Escherichia coli Nissle 1917 ECOLIN_RS20775 NAD-dependent DNA ligase LigB insig. 58 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF361 DNA ligase (EC 6.5.1.2), LigB insig. 55 100
o Klebsiella pneumoniae MKP103 KDGMDA_08110 NAD-dependent DNA ligase LigB insig. 54 98
o Serratia liquefaciens MT49 IAI46_24880 NAD-dependent DNA ligase LigB insig. 48 99
o Erwinia amylovora T8 OLJFJH_05575 NAD-dependent DNA ligase LigB insig. 47 95
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_08370 ligB NAD-dependent DNA ligase LigB cofit 48 97
o Erwinia tracheiphila SCR3 LU632_RS22215 ligB NAD-dependent DNA ligase LigB insig. 48 97
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS18820 NAD-dependent DNA ligase LigB insig. 47 97
o Pantoea sp. MT58 IAI47_00525 NAD-dependent DNA ligase LigB insig. 47 98
o Pectobacterium carotovorum WPP14 HER17_RS21370 NAD-dependent DNA ligase LigB insig. 46 97
o Dickeya dianthicola ME23 DZA65_RS22135 NAD-dependent DNA ligase LigB insig. 46 97
o Dickeya dianthicola 67-19 HGI48_RS21165 NAD-dependent DNA ligase LigB insig. 46 97
o Dickeya dadantii 3937 DDA3937_RS00195 NAD-dependent DNA ligase LigB insig. 46 97
o Pseudomonas sp. DMC3 GFF161 DNA ligase B cofit 44 97
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2394 DNA ligase (EC 6.5.1.2) insig. 45 97
o Pseudomonas fluorescens FW300-N2E3 AO353_07970 aromatic ring-opening dioxygenase LigA insig. 43 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1060 DNA ligase (EC 6.5.1.2) insig. 43 99
o Pseudomonas putida KT2440 PP_4968 DNA ligase B insig. 43 97
o Pseudomonas syringae pv. syringae B728a Psyr_4796 DNA ligase (NAD+) insig. 43 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4796 DNA ligase (NAD+) insig. 43 99
o Pseudomonas sp. SVBP6 COO64_RS17540 ligB NAD-dependent DNA ligase LigB insig. 43 97
o Rahnella sp. WP5 EX31_RS15795 NAD-dependent DNA ligase LigB insig. 43 97
o Rhodanobacter sp. FW510-T8 OKGIIK_12905 ligB NAD-dependent DNA ligase LigB insig. 44 99
o Pseudomonas segetis P6 MPMX49_00650 DNA ligase B insig. 43 97
o Pseudomonas stutzeri RCH2 Psest_0318 NAD-dependent DNA ligase (contains BRCT domain type II) sig. 41 100
o Pseudomonas simiae WCS417 PS417_26460 NAD-dependent DNA ligase LigB insig. 43 97
o Pseudomonas sp. BP01 JOY50_RS09855 ligB NAD-dependent DNA ligase LigB insig. 42 97
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS03765 NAD-dependent DNA ligase LigB insig. 44 97
o Pseudomonas fluorescens SBW25 PFLU_RS28115 NAD-dependent DNA ligase LigB insig. 42 97
o Pseudomonas fluorescens SBW25-INTG PFLU_RS28115 NAD-dependent DNA ligase LigB insig. 42 97
o Pseudomonas lactucae CFBP13502 GEMAOFIL_05424 DNA ligase B cofit 41 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4650 DNA ligase (EC 6.5.1.2) insig. 41 97
o Rhodanobacter denitrificans MT42 LRK55_RS10680 NAD-dependent DNA ligase LigB insig. 44 97
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS10975 NAD-dependent DNA ligase LigB insig. 44 97
o Pseudomonas sp. S08-1 OH686_10800 DNA ligase (NAD(+)) cofit 42 99
o Pseudomonas sp. RS175 PFR28_04192 DNA ligase B insig. 40 99
o Pseudomonas fluorescens FW300-N2C3 AO356_13660 aromatic ring-opening dioxygenase LigA insig. 41 97
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_04510 DNA ligase (NAD(+)) LigA no data 27 92
  Synechocystis sp000284455 PCC 6803 SGL_RS01920 NAD-dependent DNA ligase LigA no data 27 91
  Rhodopseudomonas palustris CGA009 TX73_018230 NAD-dependent DNA ligase LigA no data 28 74
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS02055 DNA ligase (NAD(+)) LigA no data 23 94
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2041 DNA ligase (EC 6.5.1.2) no data 26 94
  Escherichia coli ECRC100 OKFHMN_22215 ligA NAD-dependent DNA ligase LigA no data 25 94
  Escherichia coli ECRC101 MCAODC_12745 ligA NAD-dependent DNA ligase LigA no data 25 94
  Escherichia coli ECRC102 NIAGMN_19985 ligA NAD-dependent DNA ligase LigA no data 25 94
  Escherichia coli ECRC98 JDDGAC_26165 ligA NAD-dependent DNA ligase LigA no data 25 94
  Escherichia coli ECRC99 KEDOAH_06005 ligA NAD-dependent DNA ligase LigA no data 25 94
  Klebsiella pneumoniae MKP103 KDGMDA_27470 NAD-dependent DNA ligase LigA no data 25 94
  Escherichia coli BL21 ECD_02311 DNA ligase, NAD(+)-dependent no data 25 94
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01312 DNA ligase no data 25 94
  Rhodospirillum rubrum S1H Rru_A0939 DNA ligase (NAD+) (NCBI) no data 29 73
  Escherichia fergusonii Becca EFB2_01465 DNA ligase no data 25 94
  Escherichia coli ECOR27 NOLOHH_13895 ligA NAD-dependent DNA ligase LigA no data 25 94
  Escherichia coli ECRC62 BNILDI_12760 ligA NAD-dependent DNA ligase LigA no data 25 94
  Escherichia coli Nissle 1917 ECOLIN_RS13855 NAD-dependent DNA ligase LigA no data 25 94
  Escherichia coli BW25113 b2411 ligA NAD-dependent DNA ligase LigA (NCBI) no data 25 94
  Escherichia coli ECOR38 HEPCGN_21395 ligA NAD-dependent DNA ligase LigA no data 25 94
  Enterobacter asburiae PDN3 EX28DRAFT_0217 DNA ligase, NAD-dependent no data 26 94
  Dinoroseobacter shibae DFL-12 Dshi_1509 DNA ligase, NAD-dependent (RefSeq) no data 27 84
  Erwinia amylovora T8 OLJFJH_10880 NAD-dependent DNA ligase LigA no data 26 83
  Enterobacter sp. TBS_079 MPMX20_03305 DNA ligase no data 26 94
  Pseudomonas sp. SVBP6 COO64_RS18560 ligA NAD-dependent DNA ligase LigA no data 26 92
  Rahnella sp. WP5 EX31_RS20160 NAD-dependent DNA ligase LigA no data 26 93
  Klebsiella michiganensis M5al BWI76_RS20625 DNA ligase (NAD(+)) LigA no data 26 91
  Acinetobacter baumannii LAC-4 RR41_RS15265 NAD-dependent DNA ligase LigA no data 25 94
  Mycobacterium tuberculosis H37Rv Rv3014c DNA ligase [NAD dependent] LigA (polydeoxyribonucleotide synthase [NAD+]) no data 27 93
  Xanthobacter sp. DMC5 GFF3828 DNA ligase no data 26 92
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3775 DNA ligase, NAD-dependent no data 28 71
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3957 DNA ligase, NAD-dependent no data 27 75
  Bifidobacterium breve UCC2003 BBR_RS13815 NAD-dependent DNA ligase LigA no data 30 69
  Marinobacter adhaerens HP15 HP15_1535 NAD-dependent DNA ligase no data 25 88
  Lysobacter sp. OAE881 ABIE51_RS08890 NAD-dependent DNA ligase LigA no data 27 73
  Cellulophaga baltica 18 M666_RS17735 NAD-dependent DNA ligase LigA no data 26 73
  Azospirillum brasilense Sp245 AZOBR_RS12375 NAD-dependent DNA ligase LigA no data 25 90
  Pseudomonas sp. BP01 JOY50_RS00235 ligA NAD-dependent DNA ligase LigA no data 24 92
  Pseudomonas stutzeri RCH2 Psest_2508 DNA ligase, NAD-dependent no data 26 85
  Pseudomonas putida KT2440 PP_4274 DNA ligase no data 24 92
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3857 DNA ligase (EC 6.5.1.2) no data 25 84
  Acinetobacter radioresistens SK82 MPMX26_02460 DNA ligase no data 25 95
  Alteromonas macleodii MIT1002 MIT1002_01924 DNA ligase no data 23 95
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4080 DNA ligase (EC 6.5.1.2) no data 24 84
  Pseudomonas simiae WCS417 PS417_20865 NAD-dependent DNA ligase LigA no data 26 67
  Dickeya dianthicola ME23 DZA65_RS18230 NAD-dependent DNA ligase LigA no data 26 85
  Pseudomonas fluorescens FW300-N2E3 AO353_00710 aromatic ring-opening dioxygenase LigA no data 25 84
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS11720 NAD-dependent DNA ligase LigA no data 24 84