Homologs of ECOLIN_RS17380 from Escherichia coli Nissle 1917

TRAP transporter substrate-binding protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Escherichia coli Nissle 1917 ECOLIN_RS17380 TRAP transporter substrate-binding protein insig. 100 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3130 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 84 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03838 Solute-binding protein insig. 56 94
o Escherichia coli ECRC62 BNILDI_07130 Bacterial extracellular solute-binding protein, family 7 cofit 56 94
o Escherichia coli ECOR27 NOLOHH_11100 Bacterial extracellular solute-binding protein, family 7 cofit 46 98
o Escherichia coli ECOR38 HEPCGN_18535 Bacterial extracellular solute-binding protein, family 7 insig. 46 98
o Klebsiella michiganensis M5al BWI76_RS24125 hypothetical protein insig. 45 97
o Alteromonas macleodii MIT1002 MIT1002_02426 Extracytoplasmic solute receptor protein YiaO insig. 48 87
o Azospirillum brasilense Sp245 AZOBR_RS27160 C4-dicarboxylate ABC transporter substrate-binding protein insig. 47 89
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3629 tripartite ATP-independent periplasmic transporter solute receptor, DctP family insig. 44 98
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2275 Predicted rhamnogalacturonide-specific TRAP-type transporter, substrate-binding component RhiA insig. 39 90
  Azospirillum brasilense Sp245 AZOBR_RS30130 C4-dicarboxylate ABC transporter insig. 40 82
o Agrobacterium fabrum C58 Atu3137 C4-dicarboxylate-binding protein strong 37 92
o Ralstonia sp. UNC404CL21Col ABZR87_RS21090 TRAP transporter substrate-binding protein insig. 36 87
o Bosea sp. OAE506 ABIE41_RS07830 TRAP transporter substrate-binding protein insig. 37 91
o Burkholderia phytofirmans PsJN BPHYT_RS24175 C4-dicarboxylate ABC transporter insig. 33 95
o Azospirillum sp. SherDot2 MPMX19_05801 Solute-binding protein insig. 40 82
o Caulobacter crescentus NA1000 CCNA_01513 C4-dicarboxylate-binding protein strong 39 90
o Caulobacter crescentus NA1000 Δfur CCNA_01513 C4-dicarboxylate-binding protein insig. 39 90
o Paraburkholderia graminis OAS925 ABIE53_006502 tripartite ATP-independent transporter DctP family solute receptor sig. 33 92
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05324 tripartite ATP-independent transporter solute receptor, DctP family insig. 33 92
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF797 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 37 93
o Variovorax sp. SCN45 GFF2918 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 35 100
  Azospirillum brasilense Sp245 AZOBR_RS31400 C4-dicarboxylate ABC transporter insig. 39 82
o Sinorhizobium meliloti 1021 SM_b21353 periplasmic C4-dicarboxylate transport protein insig. 34 94
o Variovorax sp. OAS795 ABID97_RS10340 TRAP transporter substrate-binding protein insig. 38 85
o Pseudomonas stutzeri RCH2 Psest_0363 tripartite ATP-independent periplasmic transporter solute receptor, DctP family insig. 33 91
o Enterobacter sp. TBS_079 MPMX20_04349 Solute-binding protein insig. 33 95
o Pseudomonas putida KT2440 PP_1169 D-glucuronate / D-galacturonate TRAP transporter, solute receptor component (from data) strong 34 85
o Pectobacterium carotovorum WPP14 HER17_RS19675 TRAP transporter substrate-binding protein insig. 32 93
o Rahnella sp. WP5 EX31_RS08010 TRAP transporter substrate-binding protein insig. 32 94
o Pseudomonas syringae pv. syringae B728a Psyr_0900 TRAP dicarboxylate transporter- DctP subunit insig. 32 94
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0900 TRAP dicarboxylate transporter- DctP subunit insig. 32 94
o Pantoea sp. MT58 IAI47_03230 TRAP transporter substrate-binding protein insig. 32 91
o Pseudomonas fluorescens FW300-N2C3 AO356_23055 C4-dicarboxylate ABC transporter insig. 35 83
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_487 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 33 91
o Pseudomonas sp. RS175 PFR28_02438 Solute-binding protein strong 33 91
o Pseudomonas fluorescens SBW25 PFLU_RS19295 TRAP transporter substrate-binding protein insig. 35 83
o Pseudomonas fluorescens SBW25-INTG PFLU_RS19295 TRAP transporter substrate-binding protein insig. 35 83
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1301 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 33 98
o Pseudomonas simiae WCS417 PS417_17370 C4-dicarboxylate ABC transporter insig. 31 96
  Castellaniella sp019104865 MT123 ABCV34_RS07845 TRAP transporter substrate-binding protein insig. 37 76
  Pseudomonas sp. RS175 PFR28_01614 hypothetical protein insig. 32 95
o Lysobacter sp. OAE881 ABIE51_RS02850 TRAP transporter substrate-binding protein insig. 30 86
o Acidovorax sp. GW101-3H11 Ac3H11_3957 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 31 86
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.201.1 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 32 82
  Pseudomonas fluorescens FW300-N2C3 AO356_25645 ABC transporter substrate-binding protein insig. 32 95
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1783 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein insig. 34 79
  Variovorax sp. SCN45 GFF6468 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein insig. 31 94
  Castellaniella sp019104865 MT123 ABCV34_RS12250 TRAP transporter substrate-binding protein insig. 32 93
  Castellaniella sp019104865 MT123 ABCV34_RS11540 TRAP transporter substrate-binding protein insig. 32 86
  Acidovorax sp. GW101-3H11 Ac3H11_161 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein insig. 31 93
  Variovorax sp. OAS795 ABID97_RS19625 TRAP transporter substrate-binding protein insig. 32 95
  Sinorhizobium meliloti 1021 SM_b20036 ABC transporter substrate-binding protein insig. 29 92
  Sinorhizobium meliloti 1021 SM_b21438 C4-dicarboxylate transport system, C4-dicarboxylate-binding protein precursor signal peptide insig. 29 99
  Azospirillum sp. SherDot2 MPMX19_03529 2,3-diketo-L-gulonate-binding periplasmic protein YiaO insig. 32 87
  Acidovorax sp. GW101-3H11 Ac3H11_1227 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 33 74
  Azospirillum sp. SherDot2 MPMX19_05866 hypothetical protein insig. 31 88
  Variovorax sp. SCN45 GFF1521 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 30 87
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF430 2,3-diketo-L-gulonate-binding periplasmic protein yiaO precursor insig. 28 98
o Phaeobacter inhibens DSM 17395 PGA1_c20680 TRAP transporter for fumarate, succinate, L-malate, and 2-oxogulatarate, substrate-binding component (from data) strong 31 89
  Azospirillum sp. SherDot2 MPMX19_00659 C4-dicarboxylate-binding periplasmic protein DctP insig. 30 100
  Dinoroseobacter shibae DFL-12 Dshi_3326 TRAP dicarboxylate transporter, DctP subunit (RefSeq) insig. 31 83
  Castellaniella sp019104865 MT123 ABCV34_RS13980 TRAP transporter substrate-binding protein insig. 32 87
  Herbaspirillum seropedicae SmR1 HSERO_RS04240 C4-dicarboxylate ABC transporter sig. 29 94
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2974 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 33 84
  Serratia liquefaciens MT49 IAI46_00375 TRAP transporter substrate-binding protein insig. 30 82
  Sinorhizobium meliloti 1021 SM_b20295 ABC transporter substrate-binding protein insig. 31 96
  Azospirillum brasilense Sp245 AZOBR_RS26640 ABC transporter substrate-binding protein insig. 30 87
  Azospirillum brasilense Sp245 AZOBR_RS15915 gluconate TRAP transporter, periplasmic solute-binding component (from data) strong 30 87
  Vibrio cholerae E7946 ATCC 55056 CSW01_08925 sialic acid-binding protein insig. 29 97
  Escherichia coli BL21 ECD_03431 2,3-diketo-L-gulonate-binding periplasmic protein insig. 27 97
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00125 2,3-diketo-L-gulonate-binding periplasmic protein YiaO insig. 27 97
  Escherichia coli BW25113 b3579 yiaO predicted transporter (NCBI) insig. 27 97
  Escherichia coli ECOR27 NOLOHH_07820 yiaO 2,3-diketo-L-gulonate transporter substrate-binding protein YiaO cofit 27 97
  Azospirillum sp. SherDot2 MPMX19_06061 Solute-binding protein insig. 32 88
  Escherichia fergusonii Becca EFB2_00227 2,3-diketo-L-gulonate-binding periplasmic protein YiaO insig. 27 97
  Escherichia coli Nissle 1917 ECOLIN_RS20470 2,3-diketo-L-gulonate TRAP transporter substrate-binding protein YiaO insig. 27 97
  Escherichia coli ECOR38 HEPCGN_14765 yiaO 2,3-diketo-L-gulonate transporter substrate-binding protein YiaO insig. 27 97
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5231 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 28 92
  Variovorax sp. OAS795 ABID97_RS05815 sialic acid TRAP transporter substrate-binding protein SiaP strong 31 88
  Escherichia coli ECRC62 BNILDI_03725 yiaO 2,3-diketo-L-gulonate transporter substrate-binding protein YiaO insig. 27 97
  Sinorhizobium meliloti 1021 SMc00265 periplasmic binding protein insig. 32 88
  Magnetospirillum magneticum AMB-1 AMB_RS04560 C4-dicarboxylate ABC transporter cofit 30 85
  Azospirillum sp. SherDot2 MPMX19_04764 Solute-binding protein insig. 28 94
  Pseudomonas sp. RS175 PFR28_00119 C4-dicarboxylate-binding periplasmic protein DctP insig. 28 94
  Azospirillum sp. SherDot2 MPMX19_03904 Sialic acid-binding periplasmic protein SiaP insig. 30 92
  Pseudomonas sp. RS175 PFR28_00257 C4-dicarboxylate-binding periplasmic protein DctP insig. 30 77
  Sinorhizobium meliloti 1021 SMc00271 periplasmic binding protein insig. 29 92
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1656 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 28 86
  Rhodospirillum rubrum S1H Rru_A3678 TRAP dicarboxylate transporter- DctP subunit (NCBI) strong 31 94
  Pseudomonas fluorescens FW300-N2C3 AO356_06880 C4-dicarboxylate ABC transporter insig. 30 79
  Vibrio cholerae E7946 ATCC 55056 CSW01_09650 C4-dicarboxylate ABC transporter insig. 29 81
  Desulfovibrio vulgaris Miyazaki F DvMF_1932 TRAP dicarboxylate transporter, DctP subunit (RefSeq) insig. 29 86
  Desulfovibrio vulgaris Miyazaki F DvMF_2135 TRAP dicarboxylate transporter, DctP subunit (RefSeq) insig. 31 92
  Bosea sp. OAE506 ABIE41_RS24145 TRAP transporter substrate-binding protein insig. 30 65
  Variovorax sp. SCN45 GFF1519 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 28 94
  Azospirillum brasilense Sp245 AZOBR_RS16140 C4-dicarboxylate ABC transporter insig. 28 91
  Pseudomonas stutzeri RCH2 Psest_2125 D-gluconate TRAP transporter, periplasmic component (from data) strong 30 83
  Azospirillum brasilense Sp245 AZOBR_RS09605 C4-dicarboxylate ABC transporter sig. 30 81