Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Dickeya dianthicola ME23 | DZA65_RS07950 | | phosphonate metabolism transcriptional regulator PhnF | insig. | 100 | 100 |
o | Dickeya dianthicola 67-19 | HGI48_RS07445 | | phosphonate metabolism transcriptional regulator PhnF | insig. | 98 | 100 |
o | Dickeya dadantii 3937 | DDA3937_RS07595 | | phosphonate metabolism transcriptional regulator PhnF | insig. | 97 | 100 |
o | Serratia liquefaciens MT49 | IAI46_02110 | | phosphonate metabolism transcriptional regulator PhnF | insig. | 77 | 100 |
o | Rahnella sp. WP5 | EX31_RS08405 | | phosphonate metabolism transcriptional regulator PhnF | insig. | 76 | 99 |
o | Pantoea sp. MT58 | IAI47_07750 | | phosphonate metabolism transcriptional regulator PhnF | insig. | 74 | 99 |
o | Escherichia coli BL21 | ECD_03974 | | putative DNA-binding transcriptional regulator of phosphonate uptake and biodegradation | insig. | 70 | 99 |
o | Escherichia coli ECOR27 | NOLOHH_04905 | phnF | phosphonate metabolism transcriptional regulator PhnF | cofit | 70 | 99 |
o | Escherichia coli ECOR38 | HEPCGN_11275 | phnF | phosphonate metabolism transcriptional regulator PhnF | insig. | 70 | 99 |
o | Escherichia coli ECRC62 | BNILDI_06590 | phnF | phosphonate metabolism transcriptional regulator PhnF | insig. | 70 | 99 |
o | Escherichia coli BW25113 | b4102 | phnF | predicted DNA-binding transcriptional regulator of phosphonate uptake and biodegradation (NCBI) | strong | 70 | 99 |
o | Escherichia fergusonii Becca | EFB2_04480 | | putative transcriptional regulator PhnF | insig. | 70 | 99 |
o | Escherichia coli ECRC100 | OKFHMN_12645 | phnF | phosphonate metabolism transcriptional regulator PhnF | insig. | 70 | 99 |
o | Escherichia coli ECRC101 | MCAODC_03155 | phnF | phosphonate metabolism transcriptional regulator PhnF | insig. | 70 | 99 |
o | Escherichia coli ECRC102 | NIAGMN_10490 | phnF | phosphonate metabolism transcriptional regulator PhnF | insig. | 70 | 99 |
o | Escherichia coli ECRC98 | JDDGAC_16280 | phnF | phosphonate metabolism transcriptional regulator PhnF | insig. | 70 | 99 |
o | Escherichia coli ECRC99 | KEDOAH_15520 | phnF | phosphonate metabolism transcriptional regulator PhnF | no data | 70 | 99 |
o | Escherichia coli Nissle 1917 | ECOLIN_RS23750 | | phosphonate metabolism transcriptional regulator PhnF | insig. | 70 | 99 |
o | Enterobacter sp. TBS_079 | MPMX20_00322 | | putative transcriptional regulator PhnF | insig. | 70 | 99 |
o | Enterobacter asburiae PDN3 | EX28DRAFT_4203 | | phosphonates metabolism transcriptional regulator PhnF | insig. | 69 | 99 |
o | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03942 | | putative transcriptional regulator PhnF | insig. | 69 | 99 |
o | Klebsiella michiganensis M5al | BWI76_RS02230 | | phosphonate metabolism transcriptional regulator PhnF | insig. | 67 | 99 |
o | Pseudomonas syringae pv. syringae B728a | Psyr_2250 | | transcriptional regulator, GntR family | no data | 39 | 97 |
o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2250 | | transcriptional regulator, GntR family | insig. | 39 | 97 |
o | Pseudomonas stutzeri RCH2 | Psest_0097 | | phosphonates metabolism transcriptional regulator PhnF | insig. | 42 | 97 |
o | Pseudomonas fluorescens SBW25 | PFLU_RS08755 | | phosphonate metabolism transcriptional regulator PhnF | insig. | 41 | 85 |
o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS08755 | | phosphonate metabolism transcriptional regulator PhnF | insig. | 41 | 85 |
o | Phaeobacter inhibens DSM 17395 | PGA1_c04230 | | putative phosphonates metabolism transcriptional regulator phnF | strong | 32 | 96 |
| Ralstonia solanacearum PSI07 | RPSI07_RS14660 | | GntR family transcriptional regulator | insig. | 34 | 90 |
| Ralstonia solanacearum GMI1000 | RS_RS10035 | | GntR family transcriptional regulator | insig. | 32 | 89 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS02655 | | GntR family transcriptional regulator | insig. | 31 | 89 |
| Ralstonia solanacearum UW163 | UW163_RS11070 | | GntR family transcriptional regulator | insig. | 31 | 89 |
o | Paraburkholderia sabiae LMG 24235 | QEN71_RS14195 | | phosphonate metabolism transcriptional regulator PhnF | sig. | 30 | 87 |
| Klebsiella michiganensis M5al | BWI76_RS27890 | | GntR family transcriptional regulator | sig. | 31 | 94 |
o | Variovorax sp. OAS795 | ABID97_RS08510 | | GntR family transcriptional regulator | strong | 32 | 85 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS14920 | | GntR family transcriptional regulator | no data | 31 | 89 |
| Enterobacter sp. TBS_079 | MPMX20_00018 | | Mannosyl-D-glycerate transport/metabolism system repressor MngR | insig. | 32 | 90 |
o | Sinorhizobium meliloti 1021 | SM_b20758 | | ArsR family transcriptional regulator | insig. | 31 | 95 |
| Paraburkholderia graminis OAS925 | ABIE53_004764 | | GntR family transcriptional regulator | sig. | 32 | 90 |
| Burkholderia phytofirmans PsJN | BPHYT_RS33950 | | GntR family transcriptional regulator | sig. | 32 | 90 |
| Burkholderia phytofirmans PsJN | BPHYT_RS29455 | | GntR family transcriptional regulator | no data | 30 | 87 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS14575 | | GntR family transcriptional regulator | strong | 33 | 89 |
o | Cupriavidus basilensis FW507-4G11 | RR42_RS28080 | | GntR family transcriptional regulator | insig. | 31 | 95 |
o | Variovorax sp. SCN45 | GFF3900 | | Transcriptional regulator, GntR family | sig. | 31 | 84 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_06631 | | transcriptional regulator, GntR family | no data | 32 | 90 |
| Enterobacter asburiae PDN3 | EX28DRAFT_3971 | | Transcriptional regulators | insig. | 31 | 90 |
o | Bosea sp. OAE506 | ABIE41_RS07695 | | phosphonate metabolism transcriptional regulator PhnF | insig. | 32 | 83 |
o | Agrobacterium fabrum C58 | Atu0182 | | transcriptional regulator, GntR family | insig. | 29 | 98 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS17570 | | GntR family transcriptional regulator | strong | 32 | 90 |
| Acidovorax sp. GW101-3H11 | Ac3H11_3155 | | Putative alkanesulfonate metabolism utilization regulator | strong | 30 | 84 |
| Escherichia coli ECOR27 | NOLOHH_07250 | yidP | Uncharacterized HTH-type transcriptional regulator YidP | insig. | 29 | 92 |
| Escherichia coli ECOR38 | HEPCGN_13815 | yidP | Uncharacterized HTH-type transcriptional regulator YidP | insig. | 29 | 92 |
| Escherichia coli ECRC100 | OKFHMN_15085 | yidP | Uncharacterized HTH-type transcriptional regulator YidP | cofit | 29 | 92 |
| Escherichia coli ECRC101 | MCAODC_05595 | yidP | Uncharacterized HTH-type transcriptional regulator YidP | insig. | 29 | 92 |
| Escherichia coli ECRC102 | NIAGMN_12840 | yidP | Uncharacterized HTH-type transcriptional regulator YidP | insig. | 29 | 92 |
| Escherichia coli ECRC98 | JDDGAC_18705 | yidP | Uncharacterized HTH-type transcriptional regulator YidP | cofit | 29 | 92 |
| Escherichia coli ECRC99 | KEDOAH_13065 | yidP | Uncharacterized HTH-type transcriptional regulator YidP | no data | 29 | 92 |
| Escherichia coli BW25113 | b3684 | yidP | predicted DNA-binding transcriptional regulator (NCBI) | insig. | 29 | 92 |
| Escherichia coli ECRC62 | BNILDI_04280 | yidP | Uncharacterized HTH-type transcriptional regulator YidP | insig. | 29 | 92 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_00019 | | Mannosyl-D-glycerate transport/metabolism system repressor MngR | insig. | 28 | 92 |
o | Rhodopseudomonas palustris CGA009 | TX73_003600 | | phosphonate metabolism transcriptional regulator PhnF | strong | 29 | 86 |
o | Pectobacterium carotovorum WPP14 | HER17_RS19720 | | GntR family transcriptional regulator | cofit | 30 | 98 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS14460 | | GntR family transcriptional regulator | no data | 30 | 89 |
| Acidovorax sp. GW101-3H11 | Ac3H11_4540 | | Transcriptional regulator PhnF | insig. | 29 | 96 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS29705 | | hypothetical protein | insig. | 27 | 84 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_0513 | | transcriptional regulator, GntR family (RefSeq) | sig. | 28 | 92 |
| Ralstonia solanacearum GMI1000 | RS_RS24375 | | GntR family transcriptional regulator | insig. | 32 | 87 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS16690 | | GntR family transcriptional regulator | insig. | 32 | 87 |
| Ralstonia solanacearum UW163 | UW163_RS18045 | | GntR family transcriptional regulator | insig. | 32 | 87 |
| Acidovorax sp. GW101-3H11 | Ac3H11_2559 | | Histidine utilization repressor | strong | 29 | 83 |
o | Dinoroseobacter shibae DFL-12 | Dshi_0694 | | transcriptional regulator, GntR family (RefSeq) | insig. | 32 | 95 |
| Burkholderia phytofirmans PsJN | BPHYT_RS02725 | | GntR family transcriptional regulator | sig. | 34 | 61 |
| Azospirillum sp. SherDot2 | MPMX19_06519 | | HTH-type transcriptional repressor NagR | insig. | 32 | 68 |
| Azospirillum sp. SherDot2 | MPMX19_03609 | | HTH-type transcriptional repressor NagR | insig. | 29 | 92 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_02181 | | Mannosyl-D-glycerate transport/metabolism system repressor MngR | insig. | 24 | 96 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS01580 | | GntR family transcriptional regulator | sig. | 29 | 96 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF309 | | Putative transcriptional regulator of unknown carbohydrate utilization cluster, GntR family | insig. | 27 | 77 |
| Dechlorosoma suillum PS | Dsui_2210 | | transcriptional regulator | strong | 30 | 80 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.953.1 | | Predicted transcriptional regulator of N-Acetylglucosamine utilization, GntR family | insig. | 36 | 54 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS01265 | | GntR family transcriptional regulator | strong | 26 | 100 |
| Escherichia fergusonii Becca | EFB2_02423 | | Mannosyl-D-glycerate transport/metabolism system repressor MngR | insig. | 24 | 87 |
| Escherichia coli ECOR27 | NOLOHH_18685 | | GntR family transcriptional regulator | no data | 24 | 87 |
| Escherichia coli ECRC62 | BNILDI_17175 | | GntR family transcriptional regulator | cofit | 24 | 87 |
| Escherichia coli Nissle 1917 | ECOLIN_RS08770 | | GntR family transcriptional regulator | no data | 24 | 87 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01980 | | transcriptional regulator, GntR family | insig. | 34 | 61 |
| Paraburkholderia graminis OAS925 | ABIE53_000688 | | GntR family transcriptional regulator | strong | 34 | 61 |
| Escherichia coli ECOR38 | HEPCGN_26880 | | GntR family transcriptional regulator | insig. | 24 | 87 |
| Azospirillum sp. SherDot2 | MPMX19_03455 | | HTH-type transcriptional repressor NagR | insig. | 30 | 69 |
| Burkholderia phytofirmans PsJN | BPHYT_RS15800 | | GntR family transcriptional regulator | strong | 35 | 51 |
| Paraburkholderia graminis OAS925 | ABIE53_003331 | | GntR family transcriptional regulator | strong | 35 | 51 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS02910 | | GntR family transcriptional regulator | sig. | 35 | 51 |
| Ralstonia solanacearum PSI07 | RPSI07_RS06755 | | GntR family transcriptional regulator | insig. | 31 | 87 |
| Sinorhizobium meliloti 1021 | SM_b21464 | | GntR family transcriptional regulator | sig. | 29 | 92 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_23530 | | GntR family transcriptional regulator | insig. | 28 | 90 |
| Dickeya dadantii 3937 | DDA3937_RS15020 | | histidine utilization repressor | insig. | 27 | 86 |
o | Bacteroides thetaiotaomicron VPI-5482 | BT2103 | | transcriptional regulator (NCBI ptt file) | strong | 25 | 93 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS17730 | | GntR family transcriptional regulator | strong | 31 | 87 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF3371 | | Putative alkanesulfonate metabolism utilization regulator | sig. | 30 | 77 |
o | Rhizobium sp. OAE497 | ABIE40_RS00575 | | phosphonate metabolism transcriptional regulator PhnF | insig. | 28 | 96 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF508 | | Transcriptional regulator, GntR family | sig. | 23 | 97 |