Homologs of BBR_RS10510 from Bifidobacterium breve UCC2003

GGDEF domain-containing protein
SEED: Sensory box/GGDEF family protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Bifidobacterium breve UCC2003 BBR_RS10510 GGDEF domain-containing protein cofit 100 100
  Sinorhizobium meliloti 1021 SMc00038 hypothetical protein insig. 39 33
  Paraburkholderia sabiae LMG 24235 QEN71_RS02090 EAL domain-containing protein insig. 39 33
  Dechlorosoma suillum PS Dsui_0983 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 39 32
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2779 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 36 33
  Dechlorosoma suillum PS Dsui_1531 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 37 33
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1452 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 37 32
  Pseudomonas sp. RS175 PFR28_03785 hypothetical protein insig. 36 33
  Pseudomonas fluorescens FW300-N2E3 AO353_14025 diguanylate phosphodiesterase strong 36 33
  Dechlorosoma suillum PS Dsui_3104 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein strong 38 33
  Pseudomonas putida KT2440 PP_0672 Sensory box protein sig. 36 32
  Pseudomonas simiae WCS417 PS417_24275 diguanylate phosphodiesterase strong 36 33
  Pseudomonas fluorescens FW300-N2C3 AO356_15730 diguanylate phosphodiesterase insig. 36 33
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5083 Serine hydroxymethyltransferase (EC 2.1.2.1) sig. 36 33
  Burkholderia phytofirmans PsJN BPHYT_RS03250 diguanylate cyclase insig. 38 32
  Pseudomonas fluorescens FW300-N2C3 AO356_26670 histidine kinase insig. 36 33
  Pseudomonas fluorescens SBW25 PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase cofit 35 33
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase sig. 35 33
  Marinobacter adhaerens HP15 HP15_3533 response regulator receiver (CheY-like) modulated diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 35 33
  Pseudomonas stutzeri RCH2 Psest_1163 diguanylate cyclase (GGDEF) domain strong 33 33
  Pseudomonas fluorescens FW300-N2C3 AO356_17705 diguanylate cyclase insig. 39 30
  Pseudomonas syringae pv. syringae B728a Psyr_4493 PAS:GGDEF insig. 39 31
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4493 PAS:GGDEF cofit 39 31
  Marinobacter adhaerens HP15 HP15_2352 sensory box sensor/GGDEF/EAL domain protein insig. 36 33
  Herbaspirillum seropedicae SmR1 HSERO_RS23840 hypothetical protein sig. 35 33
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04630 PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein insig. 38 32
  Pseudomonas sp. S08-1 OH686_08910 Phytochrome-like protein / Cph2 cofit 34 33
  Dechlorosoma suillum PS Dsui_1890 diguanylate cyclase (GGDEF) domain-containing protein insig. 35 32
  Pseudomonas sp. S08-1 OH686_11550 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 37 33
  Dechlorosoma suillum PS Dsui_1429 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 36 34
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3950 Sensory box/GGDEF family protein insig. 39 33
  Herbaspirillum seropedicae SmR1 HSERO_RS18020 diguanylate cyclase insig. 35 35
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS18455 phosphodiesterase insig. 35 33
  Ralstonia solanacearum UW163 UW163_RS20675 phosphodiesterase insig. 35 33
  Pseudomonas sp. RS175 PFR28_03484 hypothetical protein strong 39 30
  Pseudomonas fluorescens FW300-N2E3 AO353_16180 diguanylate cyclase strong 40 30
  Pseudomonas simiae WCS417 PS417_28235 diguanylate cyclase insig. 35 33
  Magnetospirillum magneticum AMB-1 AMB_RS13545 bifunctional diguanylate cyclase/phosphodiesterase insig. 35 33
  Pseudomonas sp. S08-1 OH686_04490 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 37 33
  Ralstonia solanacearum PSI07 RPSI07_RS05100 bifunctional diguanylate cyclase/phosphodiesterase insig. 35 33
  Burkholderia phytofirmans PsJN BPHYT_RS05950 dGTP triphosphohydrolase insig. 35 32
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1640 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 34 33
  Pseudomonas sp. S08-1 OH686_13050 Sensory box/GGDEF family protein cofit 38 33
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07185 EAL domain-containing protein cofit 35 33
  Kangiella aquimarina DSM 16071 B158DRAFT_2237 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 36 32
  Enterobacter asburiae PDN3 EX28DRAFT_1002 diguanylate cyclase (GGDEF) domain insig. 35 33
  Rhodospirillum rubrum S1H Rru_A3137 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) insig. 35 33
  Pseudomonas syringae pv. syringae B728a Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 34 33
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 34 33
  Pseudomonas syringae pv. syringae B728a Psyr_1981 PAS:GGDEF insig. 38 33
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1981 PAS:GGDEF insig. 38 33
  Marinobacter adhaerens HP15 HP15_806 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 32 34
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5465 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 38 30
  Pseudomonas fluorescens SBW25 PFLU_RS15265 EAL domain-containing response regulator insig. 36 32
  Pseudomonas fluorescens SBW25-INTG PFLU_RS15265 EAL domain-containing response regulator insig. 36 32
  Pseudomonas stutzeri RCH2 Psest_4097 PAS domain S-box/diguanylate cyclase (GGDEF) domain strong 35 32
  Paraburkholderia graminis OAS925 ABIE53_001396 diguanylate cyclase (GGDEF)-like protein sig. 35 32
  Dechlorosoma suillum PS Dsui_0894 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 34 33
  Synechococcus elongatus PCC 7942 Synpcc7942_1355 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 31 33
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00268 diguanylate cyclase/phosphodiesterase insig. 34 32
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4602 Sensory box/GGDEF family protein insig. 34 34
  Pseudomonas fluorescens FW300-N2E3 AO353_20610 histidine kinase insig. 38 33
  Paraburkholderia sabiae LMG 24235 QEN71_RS24680 EAL domain-containing protein insig. 34 32
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS16935 bifunctional diguanylate cyclase/phosphodiesterase strong 34 33
  Pseudomonas fluorescens SBW25 PFLU_RS05520 GGDEF and EAL domain-containing protein insig. 36 33
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05520 GGDEF and EAL domain-containing protein insig. 36 33
  Vibrio cholerae E7946 ATCC 55056 CSW01_03440 bifunctional diguanylate cyclase/phosphodiesterase insig. 35 33
  Herbaspirillum seropedicae SmR1 HSERO_RS08510 phosphodiesterase insig. 35 32
  Pseudomonas fluorescens SBW25 PFLU_RS29895 EAL domain-containing protein insig. 34 33
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29895 EAL domain-containing protein insig. 34 33
  Rhodanobacter denitrificans MT42 LRK55_RS16650 EAL domain-containing protein strong 34 33
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3221 Sensory box/GGDEF family protein insig. 34 33
  Pseudomonas fluorescens FW300-N2C3 AO356_24220 diguanylate cyclase insig. 34 33
  Paraburkholderia sabiae LMG 24235 QEN71_RS20660 EAL domain-containing protein insig. 33 33
  Pseudomonas fluorescens FW300-N2C3 AO356_05010 diguanylate cyclase strong 33 33
  Ralstonia solanacearum GMI1000 RS_RS22415 bifunctional diguanylate cyclase/phosphodiesterase insig. 34 33
  Acidovorax sp. GW101-3H11 Ac3H11_2715 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 33 32
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2852 GGDEF domain/EAL domain protein strong 33 34
  Pseudomonas sp. RS175 PFR28_00605 hypothetical protein strong 32 33
  Pseudomonas sp. S08-1 OH686_16235 Sensory box/GGDEF family protein insig. 35 32
  Dechlorosoma suillum PS Dsui_3334 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 34 32
  Enterobacter sp. TBS_079 MPMX20_02445 putative signaling protein insig. 34 35
  Pseudomonas fluorescens FW300-N2E3 AO353_17145 diguanylate phosphodiesterase insig. 33 32
  Acidovorax sp. GW101-3H11 Ac3H11_446 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) strong 33 32
  Pseudomonas fluorescens FW300-N2C3 AO356_21390 histidine kinase insig. 37 33
  Pseudomonas putida KT2440 PP_0218 Sensory box protein strong 34 32
  Bosea sp. OAE506 ABIE41_RS13785 EAL domain-containing protein insig. 36 33
  Pseudomonas fluorescens FW300-N2E3 AO353_10050 diguanylate cyclase insig. 35 33
  Pseudomonas fluorescens SBW25 PFLU_RS20590 EAL domain-containing protein insig. 37 32
  Pseudomonas fluorescens SBW25-INTG PFLU_RS20590 EAL domain-containing protein insig. 37 32
  Pseudomonas simiae WCS417 PS417_05435 diguanylate cyclase insig. 36 32
  Magnetospirillum magneticum AMB-1 AMB_RS21860 GGDEF domain-containing protein cofit 36 32
  Pseudomonas fluorescens GW456-L13 PfGW456L13_725 Sensory box/GGDEF family protein insig. 35 33
  Pseudomonas sp. RS175 PFR28_04522 hypothetical protein insig. 35 33
  Azospirillum sp. SherDot2 MPMX19_04031 hypothetical protein insig. 39 31
  Shewanella oneidensis MR-1 SO0427 sensory box protein (NCBI ptt file) sig. 36 33
  Shewanella amazonensis SB2B Sama_0496 putative diguanylate phosphodiesterase (RefSeq) insig. 34 33
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_60 Sensory box/GGDEF family protein insig. 37 33
  Pseudomonas stutzeri RCH2 Psest_0651 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 35 32
  Dechlorosoma suillum PS Dsui_0506 diguanylate cyclase (GGDEF) domain-containing protein cofit 34 33