| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Shewanella sp. ANA-3 | Shewana3_1615 | | histone family protein DNA-binding protein (RefSeq) | insig. | 100 | 100 |
| o | Shewanella oneidensis MR-1 | SO1863 | | DNA-binding protein, HU family (NCBI ptt file) | insig. | 96 | 100 |
| o | Shewanella amazonensis SB2B | Sama_1611 | | HU family DNA-binding protein (RefSeq) | insig. | 63 | 98 |
| | Shewanella loihica PV-4 | Shew_2505 | | histone family protein DNA-binding protein (RefSeq) | no data | 42 | 99 |
| | Alteromonas macleodii MIT1002 | MIT1002_02756 | | hypothetical protein | no data | 46 | 99 |
| | Shewanella oneidensis MR-1 | SO1797 | | DNA-binding protein, HU family (NCBI ptt file) | no data | 43 | 99 |
| | Pseudomonas sp. SVBP6 | COO64_RS19210 | | HU family DNA-binding protein | insig. | 43 | 99 |
| | Shewanella sp. ANA-3 | Shewana3_2658 | | histone family protein DNA-binding protein (RefSeq) | no data | 42 | 99 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.4045.1 | | DNA-binding protein HU-beta | no data | 41 | 99 |
| | Rahnella sp. WP5 | EX31_RS22260 | | DNA-binding protein HU-beta | insig. | 42 | 99 |
| | Escherichia coli BL21 | ECD_00392 | | HU, DNA-binding transcriptional regulator, beta subunit | strong | 42 | 99 |
| | Escherichia fergusonii Becca | EFB2_03617 | | DNA-binding protein HU-beta | insig. | 42 | 99 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03233 | | DNA-binding protein HU-beta | strong | 42 | 99 |
| | Escherichia coli BW25113 | b0440 | hupB | HU, DNA-binding transcriptional regulator, beta subunit (NCBI) | strong | 42 | 99 |
| | Pantoea sp. MT58 | IAI47_14640 | | DNA-binding protein HU-beta | sig. | 42 | 99 |
| | Erwinia tracheiphila SCR3 | LU632_RS18330 | hupB | DNA-binding protein HU-beta | insig. | 42 | 99 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_1750 | | bacterial nucleoid protein HU beta subunit | no data | 42 | 99 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1750 | | bacterial nucleoid protein HU beta subunit | no data | 42 | 99 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS10555 | | DNA-binding protein HU-beta | cofit | 41 | 99 |
| | Pseudomonas sp. BP01 | JOY50_RS25900 | | HU family DNA-binding protein | no data | 40 | 99 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4356 | | DNA-binding protein HU-beta | cofit | 41 | 99 |
| | Serratia liquefaciens MT49 | IAI46_05025 | | DNA-binding protein HU-beta | sig. | 40 | 99 |
| | Escherichia coli ECOR27 | NOLOHH_01250 | hupB | DNA-binding protein HU-beta | cofit | 41 | 99 |
| | Escherichia coli ECOR38 | HEPCGN_06930 | hupB | DNA-binding protein HU-beta | insig. | 41 | 99 |
| | Escherichia coli ECRC100 | OKFHMN_08315 | hupB | DNA-binding protein HU-beta | cofit | 41 | 99 |
| | Escherichia coli ECRC101 | MCAODC_27540 | hupB | DNA-binding protein HU-beta | sig. | 41 | 99 |
| | Escherichia coli ECRC102 | NIAGMN_06370 | hupB | DNA-binding protein HU-beta | cofit | 41 | 99 |
| | Escherichia coli ECRC62 | BNILDI_22665 | hupB | DNA-binding protein HU-beta | insig. | 41 | 99 |
| | Escherichia coli ECRC98 | JDDGAC_11970 | hupB | DNA-binding protein HU-beta | insig. | 41 | 99 |
| | Escherichia coli ECRC99 | KEDOAH_19650 | hupB | DNA-binding protein HU-beta | no data | 41 | 99 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS02640 | | nucleoid-associated protein HU-beta | sig. | 41 | 99 |
| | Lysobacter sp. OAE881 | ABIE51_RS14140 | | HU family DNA-binding protein | no data | 41 | 99 |
| | Pectobacterium carotovorum WPP14 | HER17_RS15835 | | DNA-binding protein HU-beta | insig. | 41 | 99 |
| | Kangiella aquimarina DSM 16071 | B158DRAFT_1039 | | Bacterial nucleoid DNA-binding protein | strong | 42 | 99 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2555 | | DNA-binding protein HU-beta | no data | 41 | 99 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3948 | | DNA-binding protein HU-beta | no data | 41 | 99 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_20190 | | DNA-binding protein HU | no data | 41 | 99 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_01735 | | DNA-binding protein HU | no data | 41 | 99 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2215 | | DNA-binding protein HU-beta | no data | 41 | 99 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS19155 | | HU family DNA-binding protein | no data | 40 | 99 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS19155 | | HU family DNA-binding protein | no data | 40 | 99 |
| | Pseudomonas orientalis W4I3 | QF045_RS18885 | | HU family DNA-binding protein | no data | 40 | 99 |
| | Pseudomonas simiae WCS417 | PS417_17220 | | transcriptional regulator HU subunit alpha | no data | 40 | 99 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_09600 | | DNA-binding protein HU-beta | cofit | 42 | 99 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_16455 | hupB | DNA-binding protein HU-beta | no data | 41 | 99 |
| | Dickeya dadantii 3937 | DDA3937_RS05655 | | DNA-binding protein HU-beta | insig. | 40 | 99 |
| | Dickeya dianthicola 67-19 | HGI48_RS05700 | | DNA-binding protein HU-beta | insig. | 40 | 99 |
| | Dickeya dianthicola ME23 | DZA65_RS06025 | | DNA-binding protein HU-beta | insig. | 40 | 99 |
| | Azospirillum brasilense Sp245 | AZOBR_RS23140 | | transcriptional regulator | no data | 42 | 99 |
| | Pseudomonas sp. DMC3 | GFF1446 | | DNA-binding protein HU-beta | no data | 39 | 99 |
| | Shewanella amazonensis SB2B | Sama_1227 | | HU family DNA-binding protein (RefSeq) | no data | 39 | 99 |
| | Azospirillum brasilense Sp245 | AZOBR_RS33080 | | transcriptional regulator | no data | 42 | 99 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS20745 | hupB;inference=COORDINATES | nucleoid-associated protein HU-beta | no data | 40 | 99 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_08765 | | DNA-binding protein HU-beta | no data | 40 | 99 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS54825 | hupB;inference=COORDINATES | nucleoid-associated protein HU-beta | no data | 40 | 99 |
| | Pseudomonas sp. S08-1 | OH686_03630 | | DNA-binding protein HU-beta | no data | 40 | 99 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_2530 | | Bacterial nucleoid DNA-binding protein | cofit | 39 | 99 |
| | Enterobacter sp. TBS_079 | MPMX20_01031 | | DNA-binding protein HU-beta | strong | 39 | 99 |
| | Klebsiella michiganensis M5al | BWI76_RS06540 | | DNA-binding protein HU-beta | strong | 39 | 99 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_14625 | | DNA-binding protein HU-beta | sig. | 39 | 99 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_10070 | | DNA-binding protein HU-alpha | strong | 43 | 98 |
| | Pseudomonas stutzeri RCH2 | Psest_2284 | | Bacterial nucleoid DNA-binding protein | no data | 40 | 99 |
| | Klebsiella michiganensis M5al | BWI76_RS01585 | | transcriptional regulator | strong | 43 | 98 |
| | Sphingobium sp. HT1-2 | GFF1673 | | DNA-binding protein HU-beta | cofit | 42 | 99 |
| | Pectobacterium carotovorum WPP14 | HER17_RS20350 | | DNA-binding protein HU-alpha | strong | 43 | 98 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4192 | | DNA-binding protein HU-alpha | strong | 43 | 98 |
| | Rahnella sp. WP5 | EX31_RS16845 | | DNA-binding protein HU-alpha | cofit | 43 | 98 |
| | Escherichia coli BL21 | ECD_03877 | | HU, DNA-binding transcriptional regulator, alpha subunit | sig. | 43 | 98 |
| | Escherichia fergusonii Becca | EFB2_04611 | | DNA-binding protein HU-alpha | cofit | 43 | 98 |
| | Escherichia coli ECOR27 | NOLOHH_05490 | hupA | DNA-binding protein HU-alpha | insig. | 43 | 98 |
| | Escherichia coli ECRC100 | OKFHMN_13345 | hupA | DNA-binding protein HU-alpha | strong | 43 | 98 |
| | Escherichia coli ECRC101 | MCAODC_03845 | hupA | DNA-binding protein HU-alpha | strong | 43 | 98 |
| | Escherichia coli ECRC102 | NIAGMN_11095 | hupA | DNA-binding protein HU-alpha | cofit | 43 | 98 |
| | Escherichia coli ECRC62 | BNILDI_06035 | hupA | DNA-binding protein HU-alpha | cofit | 43 | 98 |
| | Escherichia coli ECRC98 | JDDGAC_16970 | hupA | DNA-binding protein HU-alpha | insig. | 43 | 98 |
| | Escherichia coli ECRC99 | KEDOAH_14815 | hupA | DNA-binding protein HU-alpha | no data | 43 | 98 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_04050 | | DNA-binding protein HU-alpha | strong | 43 | 98 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS23070 | | nucleoid-associated protein HU-alpha | strong | 43 | 98 |
| | Escherichia coli BW25113 | b4000 | hupA | HU, DNA-binding transcriptional regulator, alpha subunit (NCBI) | strong | 43 | 98 |
| | Serratia liquefaciens MT49 | IAI46_01350 | | DNA-binding protein HU-alpha | strong | 43 | 98 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_4542 | | Bacterial nucleoid DNA-binding protein | strong | 42 | 98 |
| | Enterobacter sp. TBS_079 | MPMX20_00223 | | DNA-binding protein HU-alpha | strong | 42 | 98 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_01405 | | DNA-binding protein HU-alpha | cofit | 42 | 98 |
| | Pseudomonas putida KT2440 | PP_2303 | | DNA binding regulator, beta subunit B | no data | 38 | 99 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_10915 | hupA | DNA-binding protein HU-alpha | cofit | 42 | 98 |
| | Erwinia tracheiphila SCR3 | LU632_RS01000 | hupA | DNA-binding protein HU-alpha | strong | 42 | 98 |
| | Erwinia amylovora T8 | OLJFJH_06770 | | DNA-binding protein HU-alpha | no data | 42 | 98 |
| | Erwinia amylovora T8 | OLJFJH_17955 | | DNA-binding protein HU-beta | insig. | 40 | 99 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_0103 | | Bacterial nucleoid DNA-binding protein | no data | 40 | 99 |
| | Escherichia coli ECOR38 | HEPCGN_11980 | hupA | DNA-binding protein HU-alpha | strong | 43 | 98 |
| | Dickeya dadantii 3937 | DDA3937_RS01205 | | DNA-binding protein HU-alpha | no data | 42 | 98 |
| | Pantoea sp. MT58 | IAI47_18055 | | DNA-binding protein HU-alpha | strong | 40 | 98 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS22590 | | DNA-binding protein HU-alpha | no data | 40 | 98 |
| | Dickeya dianthicola 67-19 | HGI48_RS01200 | | DNA-binding protein HU-alpha | no data | 40 | 98 |
| | Dickeya dianthicola ME23 | DZA65_RS01245 | | DNA-binding protein HU-alpha | no data | 40 | 98 |
| | Dechlorosoma suillum PS | Dsui_2199 | | bacterial nucleoid DNA-binding protein | cofit | 39 | 99 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5425 | | DNA-binding protein HU-beta | insig. | 38 | 99 |
| | Marinobacter adhaerens HP15 | HP15_2182 | | histone-like bacterial DNA-binding protein | no data | 40 | 98 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS07315 | | HU family DNA-binding protein | no data | 39 | 99 |
| | Azospirillum sp. SherDot2 | MPMX19_01048 | | DNA-binding protein HU | no data | 40 | 99 |