Homologs of Sama_0479 from Shewanella amazonensis SB2B

hypothetical protein (RefSeq)
SEED: ABC-type multidrug transport system, permease component
KEGG: antibiotic transport system permease protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella amazonensis SB2B Sama_0479 hypothetical protein (RefSeq) strong 100 100
o Shewanella oneidensis MR-1 SO4088 conserved hypothetical protein (NCBI ptt file) strong 56 97
o Shewanella loihica PV-4 Shew_0413 ABC-2 type transporter (RefSeq) sig. 57 99
o Shewanella sp. ANA-3 Shewana3_3638 ABC-2 type transporter (RefSeq) strong 57 97
o Pectobacterium carotovorum WPP14 HER17_RS19370 ABC transporter permease insig. 35 98
o Vibrio cholerae E7946 ATCC 55056 CSW01_08085 ABC transporter permease insig. 35 92
o Acidovorax sp. GW101-3H11 Ac3H11_501 ABC-type multidrug transport system, permease component strong 35 89
o Variovorax sp. SCN45 GFF1140 Domain of unknown function / Efflux ABC transporter, permease protein cofit 30 89
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4707 ABC-type multidrug transport system, permease component insig. 29 87
o Azospirillum sp. SherDot2 MPMX19_04495 hypothetical protein insig. 33 81
  Bacteroides stercoris CC31F HMPREF1181_RS10530 ABC transporter permease insig. 25 84
o Bacteroides ovatus ATCC 8483 BACOVA_01126 ABC-2 type transporter cofit 26 99
o Bacteroides thetaiotaomicron VPI-5482 BT3903 conserved hypothetical protein (NCBI ptt file) strong 26 99
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS10095 ABC transporter permease strong 27 87
  Acidovorax sp. GW101-3H11 Ac3H11_500 ABC-type multidrug transport system, permease component sig. 26 81
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4706 ABC-type multidrug transport system, permease component insig. 26 80
  Bacteroides stercoris CC31F HMPREF1181_RS06675 ABC transporter permease insig. 25 99
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS06100 ABC transporter permease insig. 25 87
  Bacteroides stercoris CC31F HMPREF1181_RS06680 ABC transporter permease cofit 27 91
o Phocaeicola dorei CL03T12C01 ABI39_RS17925 ABC transporter permease insig. 25 87
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS10215 ABC transporter permease insig. 25 90
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS10090 ABC transporter permease strong 26 92
  Phocaeicola dorei CL03T12C01 ABI39_RS01380 ABC transporter permease insig. 24 91
  Phocaeicola dorei CL03T12C01 ABI39_RS01375 ABC transporter permease insig. 25 97
  Bacteroides thetaiotaomicron VPI-5482 BT0956 conserved hypothetical protein, putative transmembrane protein (NCBI ptt file) strong 24 91
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS02190 ABC transporter permease cofit 24 91
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS02185 ABC transporter permease cofit 24 97
  Shewanella sp. ANA-3 Shewana3_3637 hypothetical protein (RefSeq) strong 28 60
  Variovorax sp. SCN45 GFF1139 Domain of unknown function / Efflux ABC transporter, permease protein cofit 27 90
o Acinetobacter radioresistens SK82 MPMX26_02222 hypothetical protein no data 23 86
  Shewanella oneidensis MR-1 SO4087 conserved hypothetical protein (NCBI ptt file) strong 27 60
  Bacteroides ovatus ATCC 8483 BACOVA_00759 hypothetical protein insig. 24 79
  Pseudomonas aeruginosa PA14 IKLFDK_17450 ABC transporter permease insig. 28 75
  Bacteroides stercoris CC31F HMPREF1181_RS10530 ABC transporter permease insig. 26 88
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3863 ABC-type multidrug transport system, permease component insig. 28 86
  Pseudomonas aeruginosa PA14 IKLFDK_17455 antibiotic ABC transporter permease insig. 27 81
  Rahnella sp. WP5 EX31_RS08495 ABC transporter permease insig. 26 78
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS02385 ABC transporter permease cofit 28 87
  Shewanella amazonensis SB2B Sama_0480 hypothetical protein (RefSeq) strong 32 39
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS10210 ABC transporter permease insig. 26 83
  Azospirillum sp. SherDot2 MPMX19_04496 hypothetical protein insig. 24 87
  Bacteroides ovatus ATCC 8483 BACOVA_01125 ABC-2 type transporter cofit 23 79
  Marinobacter adhaerens HP15 HP15_1351 ABC-type multidrug transport system, permease component insig. 22 88
  Serratia liquefaciens MT49 IAI46_01995 ABC transporter permease insig. 26 78
  Bacteroides thetaiotaomicron VPI-5482 BT3902 conserved hypothetical protein (NCBI ptt file) strong 23 91
  Serratia liquefaciens MT49 IAI46_02000 ABC transporter permease insig. 23 93
  Rahnella sp. WP5 EX31_RS08490 ABC transporter permease insig. 24 75
  Shewanella loihica PV-4 Shew_0414 ABC-2 type transporter (RefSeq) strong 31 38
  Lysobacter sp. OAE881 ABIE51_RS15475 ABC transporter permease insig. 22 95
  Vibrio cholerae E7946 ATCC 55056 CSW01_08090 ABC transporter permease insig. 25 52
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS13740 ABC transporter permease insig. 23 95
  Phocaeicola dorei CL03T12C01 ABI39_RS17920 ABC transporter permease insig. 24 83
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS09900 ABC transporter permease insig. 25 97
  Variovorax sp. OAS795 ABID97_RS10415 ABC transporter permease insig. 24 87
  Shewanella amazonensis SB2B Sama_3587 ABC transporter, permease protein, putative (RefSeq) insig. 23 89
  Pectobacterium carotovorum WPP14 HER17_RS19375 ABC transporter permease insig. 26 41
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS06105 ABC transporter permease sig. 24 83
  Bacteroides thetaiotaomicron VPI-5482 BT0957 conserved hypothetical protein (NCBI ptt file) sig. 24 79
  Rhodopseudomonas palustris CGA009 TX73_019610 ABC transporter permease insig. 25 87
  Rhodanobacter sp. FW510-T8 OKGIIK_02985 ABC transporter insig. 24 96
  Cupriavidus basilensis FW507-4G11 RR42_RS09735 multidrug ABC transporter ATP-binding protein insig. 26 96
  Bacteroides ovatus ATCC 8483 BACOVA_00760 ABC-2 type transporter insig. 23 79
  Pseudomonas simiae WCS417 PS417_27330 membrane protein insig. 26 76
  Sphingomonas koreensis DSMZ 15582 Ga0059261_4236 ABC-type multidrug transport system, permease component insig. 23 87
  Xanthobacter sp. DMC5 GFF4621 putative multidrug ABC transporter permease YbhS insig. 27 93
  Sinorhizobium meliloti 1021 SM_b21204 ABC transporter permease insig. 25 88
  Bacteroides ovatus ATCC 8483 BACOVA_03723 ABC-2 type transporter insig. 25 88
  Azospirillum sp. SherDot2 MPMX19_01922 putative multidrug ABC transporter permease YbhS insig. 23 86
  Enterobacter asburiae PDN3 EX28DRAFT_2199 ABC-type multidrug transport system, permease component insig. 24 87
  Escherichia coli BL21 ECD_00759 putative ABC transporter permease cofit 24 87
  Escherichia fergusonii Becca EFB2_03313 putative multidrug ABC transporter permease YbhR insig. 24 87
  Escherichia coli ECOR27 NOLOHH_22670 ybhR putative multidrug ABC transporter permease YbhR insig. 24 87
  Escherichia coli ECRC100 OKFHMN_06315 ybhR putative multidrug ABC transporter permease YbhR cofit 24 87
  Escherichia coli ECRC101 MCAODC_25530 ybhR putative multidrug ABC transporter permease YbhR cofit 24 87
  Escherichia coli ECRC102 NIAGMN_04360 ybhR putative multidrug ABC transporter permease YbhR insig. 24 87
  Escherichia coli ECRC62 BNILDI_20950 ybhR putative multidrug ABC transporter permease YbhR cofit 24 87
  Escherichia coli ECRC98 JDDGAC_09950 ybhR putative multidrug ABC transporter permease YbhR cofit 24 87
  Escherichia coli ECRC99 KEDOAH_21595 ybhR putative multidrug ABC transporter permease YbhR no data 24 87
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02921 putative multidrug ABC transporter permease YbhR insig. 24 87
  Escherichia coli BW25113 b0792 ybhR predicted transporter subunit: membrane component of ABC superfamily (NCBI) insig. 24 87
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS14185 ABC transporter permease sig. 24 86
  Shewanella oneidensis MR-1 SO1707 ABC transporter, permease protein, putative (NCBI ptt file) insig. 23 88
  Vibrio cholerae E7946 ATCC 55056 CSW01_08340 ABC transporter permease insig. 22 88
  Erwinia tracheiphila SCR3 LU632_RS22030 ABC transporter permease insig. 21 91
  Herbaspirillum seropedicae SmR1 HSERO_RS09725 ABC transporter strong 26 89
  Rahnella sp. WP5 EX31_RS00865 ABC transporter permease insig. 24 87
  Escherichia coli Nissle 1917 ECOLIN_RS04220 ABC transporter permease no data 24 87
  Rhodanobacter denitrificans MT42 LRK55_RS13905 ABC transporter permease insig. 24 86
  Escherichia coli ECOR38 HEPCGN_01725 ybhR putative multidrug ABC transporter permease YbhR insig. 24 87
  Klebsiella michiganensis M5al BWI76_RS08865 ABC transporter inner membrane insig. 24 87
  Bacteroides stercoris CC31F HMPREF1181_RS16130 ABC transporter permease insig. 24 92
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF691 ABC transport system, permease component YbhR insig. 24 87
  Pseudomonas fluorescens SBW25 PFLU_RS28985 ABC transporter permease insig. 25 76
  Pseudomonas fluorescens SBW25-INTG PFLU_RS28985 ABC transporter permease sig. 25 76
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3864 ABC-type multidrug transport system, permease component insig. 30 40
  Shewanella sp. ANA-3 Shewana3_2748 ABC-2 type transporter (RefSeq) insig. 22 88
  Pseudomonas stutzeri RCH2 Psest_4260 ABC-type multidrug transport system, ATPase component insig. 23 89
  Paraburkholderia graminis OAS925 ABIE53_005374 ABC-2 type transport system permease protein insig. 23 86
  Sinorhizobium meliloti 1021 SM_b21205 ABC transporter permease insig. 26 76
  Pseudomonas fluorescens FW300-N2E3 AO353_08800 hypothetical protein insig. 24 76