Homologs of Shew_0970 from Shewanella loihica PV-4

XRE family transcriptional regulator (RefSeq)
SEED: Putrescine utilization regulator

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella loihica PV-4 Shew_0970 XRE family transcriptional regulator (RefSeq) strong 100 100
o Shewanella sp. ANA-3 Shewana3_3100 XRE family transcriptional regulator (RefSeq) strong 85 100
o Shewanella oneidensis MR-1 SO1265 transcriptional regulator, putative (NCBI ptt file) strong 85 100
o Shewanella amazonensis SB2B Sama_2646 XRE family transcriptional regulator (RefSeq) strong 82 100
o Pseudomonas sp. S08-1 OH686_13700 Putrescine utilization regulator strong 66 100
o Pseudomonas segetis P6 ACVTMO_RS00025 cupin domain-containing protein strong 65 100
o Pseudomonas putida KT2440 PP_5268 DNA-binding transcriptional repressor PuuR-putrescine strong 64 100
o Pseudomonas aeruginosa MRSN321 DY961_RS12395 cupin domain-containing protein strong 65 100
o Pseudomonas aeruginosa PA14 IKLFDK_26945 XRE family transcriptional regulator strong 65 100
o Pseudomonas aeruginosa PUPa3 DQ20_RS49735 cupin domain-containing protein strong 65 100
o Pseudomonas stutzeri RCH2 Psest_3791 Predicted transcriptional regulators insig. 66 100
o Pseudomonas sp. BP01 JOY50_RS09135 cupin domain-containing protein insig. 63 100
o Pseudomonas fluorescens SBW25 PFLU_RS29365 cupin domain-containing protein cofit 65 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS29365 cupin domain-containing protein strong 65 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_00005 HTH-type transcriptional regulator PuuR cofit 65 100
o Pseudomonas orientalis W4I3 QF045_RS02040 cupin domain-containing protein cofit 65 100
o Pseudomonas simiae WCS417 PS417_27690 XRE family transcriptional regulator strong 65 100
o Pseudomonas sp. RS175 PFR28_04396 HTH-type transcriptional regulator PuuR strong 64 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2147 Putrescine utilization regulator strong 64 100
o Pseudomonas sp. SVBP6 COO64_RS01380 cupin domain-containing protein insig. 64 100
o Pseudomonas fluorescens FW300-N2C3 AO356_12635 XRE family transcriptional regulator strong 64 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4394 Putrescine utilization regulator strong 64 100
o Pseudomonas sp. DMC3 GFF387 HTH-type transcriptional regulator PuuR cofit 63 100
o Pseudomonas fluorescens FW300-N2E3 AO353_09140 XRE family transcriptional regulator strong 63 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_815 Putrescine utilization regulator strong 63 100
o Pseudomonas syringae pv. syringae B728a Psyr_0238 Helix-turn-helix motif protein insig. 64 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0238 Helix-turn-helix motif protein insig. 64 100
o Rhodospirillum rubrum S1H Rru_A2042 Transcriptional Regulator, XRE family with Cupin sensor domain (NCBI) insig. 52 98
o Paraburkholderia sabiae LMG 24235 QEN71_RS12920 cupin domain-containing protein insig. 51 100
o Burkholderia phytofirmans PsJN BPHYT_RS23170 XRE family transcriptional regulator insig. 51 100
o Bosea sp. OAE506 ABIE41_RS05345 cupin domain-containing protein insig. 49 99
  Pseudomonas syringae pv. syringae B728a Psyr_2705 Helix-turn-helix motif protein sig. 51 100
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2705 Helix-turn-helix motif protein sig. 51 100
o Xanthobacter sp. DMC5 GFF3339 HTH-type transcriptional regulator PuuR insig. 48 100
o Sinorhizobium meliloti 1021 SMc04387 aldehyde dehydrogenase insig. 49 100
o Azospirillum sp. SherDot2 MPMX19_04921 HTH-type transcriptional regulator PuuR insig. 48 98
o Azospirillum brasilense Sp245 AZOBR_RS19640 aldehyde dehydrogenase strong 48 98
  Pseudomonas sp. SVBP6 COO64_RS10815 cupin domain-containing protein insig. 50 100
  Pseudomonas sp. DMC3 GFF1632 HTH-type transcriptional regulator PuuR cofit 53 100
  Pseudomonas sp. BP01 JOY50_RS05840 cupin domain-containing protein insig. 50 100
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4357 Putrescine utilization regulator sig. 52 100
  Pseudomonas putida KT2440 PP_2884 XRE family transcriptional regulator strong 50 100
o Agrobacterium fabrum C58 Atu3328 aldehyde dehydrogenase strong 45 100
  Pseudomonas fluorescens FW300-N2E3 AO353_29285 XRE family transcriptional regulator strong 52 100
o Pantoea sp. MT58 IAI47_07115 HTH-type transcriptional regulator PuuR insig. 45 98
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS01235 HTH-type transcriptional regulator PuuR cofit 46 98
o Klebsiella michiganensis M5al BWI76_RS10700 XRE family transcriptional regulator strong 41 98
o Escherichia coli BL21 ECD_01276 repressor for the divergent puu operons, putrescine inducible strong 41 98
o Escherichia coli ECOR27 NOLOHH_20120 puuR HTH-type transcriptional regulator PuuR insig. 41 98
o Escherichia coli ECOR38 HEPCGN_25765 puuR HTH-type transcriptional regulator PuuR insig. 41 98
o Escherichia coli ECRC100 OKFHMN_02435 puuR HTH-type transcriptional regulator PuuR cofit 41 98
o Escherichia coli ECRC101 MCAODC_15835 puuR HTH-type transcriptional regulator PuuR insig. 41 98
o Escherichia coli ECRC102 NIAGMN_26605 puuR HTH-type transcriptional regulator PuuR insig. 41 98
o Escherichia coli ECRC62 BNILDI_18270 puuR HTH-type transcriptional regulator PuuR insig. 41 98
o Escherichia coli ECRC98 JDDGAC_04980 puuR HTH-type transcriptional regulator PuuR insig. 41 98
o Escherichia coli ECRC99 KEDOAH_26340 puuR HTH-type transcriptional regulator PuuR no data 41 98
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02383 HTH-type transcriptional regulator PuuR insig. 41 98
o Escherichia coli BW25113 b1299 puuR DNA-binding transcriptional repressor (NCBI) strong 41 98
o Serratia liquefaciens MT49 IAI46_17165 HTH-type transcriptional regulator PuuR strong 41 98
o Enterobacter asburiae PDN3 EX28DRAFT_1500 Predicted transcriptional regulators insig. 41 98
o Klebsiella pneumoniae MKP103 KDGMDA_18340 HTH-type transcriptional regulator PuuR insig. 41 98
  Serratia liquefaciens MT49 IAI46_10550 HTH-type transcriptional regulator PuuR insig. 40 98
o Rahnella sp. WP5 EX31_RS17905 HTH-type transcriptional regulator PuuR insig. 38 98
  Pseudomonas sp. BP01 JOY50_RS05765 helix-turn-helix domain-containing protein no data 32 99
  Pseudomonas putida KT2440 PP_2868 Transcriptional regulator, Cro/CI family strong 32 99
  Pseudomonas sp. SVBP6 COO64_RS21060 helix-turn-helix domain-containing protein insig. 32 99
  Pseudomonas aeruginosa MRSN321 DY961_RS10735 cupin domain-containing protein insig. 31 99
  Pseudomonas aeruginosa PA14 IKLFDK_28600 Cro/Cl family transcriptional regulator insig. 31 99
  Pseudomonas aeruginosa PUPa3 DQ20_RS51325 cupin domain-containing protein insig. 31 99
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3219 Transcriptional regulator, Cro/CI family insig. 31 99
  Pseudomonas fluorescens FW300-N2E3 AO353_24790 Cro/Cl family transcriptional regulator sig. 31 99
o Cupriavidus basilensis FW507-4G11 RR42_RS00225 XRE family transcriptional regulator insig. 30 99
o Fusobacterium nucleatum SB010 HUW76_01135 cupin domain-containing protein strong 30 100
  Rahnella sp. WP5 EX31_RS21645 XRE family transcriptional regulator insig. 31 93
  Fusobacterium nucleatum SB010 HUW76_07320 helix-turn-helix domain-containing protein strong 26 100
  Paraburkholderia sabiae LMG 24235 QEN71_RS18365 cupin domain-containing protein strong 30 100
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03889 HTH-type transcriptional regulator SutR insig. 29 98
o Ralstonia sp. UNC404CL21Col ABZR87_RS06145 XRE family transcriptional regulator insig. 31 97
o Bacteroides ovatus ATCC 8483 BACOVA_01081 hypothetical protein insig. 30 97
o Phaeobacter inhibens DSM 17395 PGA1_c28440 putative transcriptional regulator insig. 26 97
o Bacteroides thetaiotaomicron VPI-5482 BT2783 transcriptional regulator (NCBI ptt file) sig. 30 97
  Rahnella sp. WP5 EX31_RS05710 helix-turn-helix transcriptional regulator insig. 32 90
  Pseudomonas simiae WCS417 PS417_06895 DNA-binding protein sig. 30 96
o Bacteroides stercoris CC31F HMPREF1181_RS01200 helix-turn-helix transcriptional regulator insig. 31 97
  Pseudomonas fluorescens FW300-N2C3 AO356_06745 DNA-binding protein sig. 29 92
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3201 Transcriptional regulator, MerR family strong 29 92
  Azospirillum brasilense Sp245 AZOBR_RS27045 XRE family transcriptional regulator insig. 30 96
  Pseudomonas fluorescens SBW25 PFLU_RS06955 helix-turn-helix domain-containing protein insig. 31 88
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06955 helix-turn-helix domain-containing protein strong 31 88
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS14960 XRE family transcriptional regulator insig. 31 88
o Ralstonia solanacearum UW163 UW163_RS12430 XRE family transcriptional regulator no data 31 88
  Burkholderia phytofirmans PsJN BPHYT_RS07145 DNA-binding protein insig. 29 100
  Pseudomonas putida KT2440 PP_2181 Transcriptional regulator, Cro/CI family strong 27 92
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS17570 XRE family transcriptional regulator insig. 31 95
  Paraburkholderia sabiae LMG 24235 QEN71_RS16640 XRE family transcriptional regulator insig. 30 97
  Burkholderia phytofirmans PsJN BPHYT_RS22055 DNA-binding protein strong 28 100
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4551 Transcriptional regulator, MerR family insig. 30 87
o Pectobacterium carotovorum WPP14 HER17_RS21700 XRE family transcriptional regulator cofit 30 94
o Ralstonia solanacearum GMI1000 RS_RS05775 XRE family transcriptional regulator insig. 28 97
  Pseudomonas orientalis W4I3 QF045_RS17975 XRE family transcriptional regulator cofit 32 91