Homologs of Dshi_0379 from Dinoroseobacter shibae DFL-12

inner-membrane translocator (RefSeq)
SEED: Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)
KEGG: branched-chain amino acid transport system permease protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Dinoroseobacter shibae DFL-12 Dshi_0379 inner-membrane translocator (RefSeq) insig. 100 100
o Phaeobacter inhibens DSM 17395 PGA1_c32580 high-affinity branched-chain amino acid transport permease protein insig. 78 100
o Bosea sp. OAE506 ABIE41_RS05955 branched-chain amino acid ABC transporter permease insig. 58 100
o Cupriavidus basilensis FW507-4G11 RR42_RS01640 ABC transporter permease insig. 58 100
o Herbaspirillum seropedicae SmR1 HSERO_RS12820 ABC transporter permease insig. 58 100
o Dechlorosoma suillum PS Dsui_1111 ABC-type branched-chain amino acid transport system, permease component cofit 56 100
o Variovorax sp. OAS795 ABID97_RS01090 branched-chain amino acid ABC transporter permease insig. 59 100
o Acidovorax sp. GW101-3H11 Ac3H11_4628 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) insig. 55 100
o Variovorax sp. SCN45 GFF5620 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) insig. 60 100
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1081 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) no data 53 100
o Castellaniella sp019104865 MT123 ABCV34_RS14170 branched-chain amino acid ABC transporter permease insig. 57 100
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3119 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) no data 53 100
o Pseudomonas fluorescens SBW25 PFLU_RS16700 branched-chain amino acid ABC transporter permease insig. 49 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS16700 branched-chain amino acid ABC transporter permease sig. 49 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1431 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) insig. 51 100
o Pseudomonas fluorescens FW300-N2C3 AO356_28380 ABC transporter permease insig. 51 100
  Pseudomonas fluorescens FW300-N2C3 AO356_29010 ABC transporter permease insig. 51 89
  Pseudomonas fluorescens SBW25 PFLU_RS18795 branched-chain amino acid ABC transporter permease insig. 51 91
  Pseudomonas fluorescens SBW25-INTG PFLU_RS18795 branched-chain amino acid ABC transporter permease sig. 51 91
o Pseudomonas simiae WCS417 PS417_16785 ABC transporter permease insig. 50 91
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1703 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) sig. 52 88
o Pseudomonas putida KT2440 PP_2750 putative Branched-chain amino acid ABC transporter, permease protein insig. 50 89
o Agrobacterium fabrum C58 Atu5523 ABC transporter membrane spanning protein (branched chain amino acid) insig. 44 94
  Herbaspirillum seropedicae SmR1 HSERO_RS04780 ABC transporter permease insig. 47 89
o Ralstonia sp. UNC404CL21Col ABZR87_RS21155 branched-chain amino acid ABC transporter permease insig. 44 87
  Pseudomonas putida KT2440 PP_2769 putative Branched-chain amino acid ABC transporter, permease protein insig. 47 100
o Azospirillum brasilense Sp245 AZOBR_RS22335 ABC transporter permease insig. 41 98
o Azospirillum sp. SherDot2 MPMX19_03954 hypothetical protein insig. 40 99
o Rhodospirillum rubrum S1H Rru_A3507 inner-membrane translocator (NCBI) insig. 37 99
o Shewanella loihica PV-4 Shew_2608 inner-membrane translocator (RefSeq) insig. 41 99
o Marinobacter adhaerens HP15 HP15_4097 inner-membrane translocator insig. 40 98
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF963 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) insig. 39 88
o Rhodopseudomonas palustris CGA009 TX73_020950 branched-chain amino acid ABC transporter permease insig. 41 99
  Acidovorax sp. GW101-3H11 Ac3H11_4985 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) insig. 38 98
  Variovorax sp. SCN45 GFF4307 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) insig. 41 84
o Magnetospirillum magneticum AMB-1 AMB_RS18175 branched-chain amino acid ABC transporter permease cofit 38 98
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3399 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) insig. 39 89
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF949 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) insig. 38 87
  Phaeobacter inhibens DSM 17395 PGA1_c02600 putative high-affinity branched-chain amino acid transport system permease protein LivM insig. 36 97
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF938 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) insig. 35 99
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF509 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) insig. 33 97
  Acidovorax sp. GW101-3H11 Ac3H11_1938 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) insig. 32 97
  Variovorax sp. OAS795 ABID97_RS18525 branched-chain amino acid ABC transporter permease insig. 36 89
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5641 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) insig. 36 91
  Rhodopseudomonas palustris CGA009 TX73_006320 branched-chain amino acid ABC transporter permease insig. 34 83
  Variovorax sp. OAS795 ABID97_RS27805 branched-chain amino acid ABC transporter permease no data 32 97
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5638 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) insig. 33 97
  Cupriavidus basilensis FW507-4G11 RR42_RS29445 ABC transporter permease insig. 33 97
  Variovorax sp. SCN45 GFF7358 Phenylacetate ABC transporter, permease protein 2 sig. 35 74
  Desulfovibrio vulgaris Hildenborough JW710 DVU0549 proline/arginine ABC transporter, permease component (from data) strong 31 88
  Rahnella sp. WP5 EX31_RS14795 high-affinity branched-chain amino acid ABC transporter permease LivM insig. 31 90
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3216 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) sig. 30 83
  Pseudomonas sp. RS175 PFR28_00538 hypothetical protein strong 30 84
  Enterobacter sp. TBS_079 MPMX20_04332 hypothetical protein sig. 30 87
  Rhodopseudomonas palustris CGA009 TX73_020835 branched-chain amino acid ABC transporter permease insig. 34 93
  Erwinia tracheiphila SCR3 LU632_RS19245 high-affinity branched-chain amino acid ABC transporter permease LivM insig. 31 79
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF550 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) insig. 31 79
  Enterobacter asburiae PDN3 EX28DRAFT_4288 ABC-type branched-chain amino acid transport system, permease component cofit 31 79
  Herbaspirillum seropedicae SmR1 HSERO_RS08280 leucine/isoleucine/valine transporter permease subunit sig. 31 81
  Desulfovibrio vulgaris Miyazaki F DvMF_2609 inner-membrane translocator (RefSeq) strong 29 89
  Pseudomonas putida KT2440 PP_1139 branched chain amino acid transporter - permease subunit strong 27 98
  Rhodospirillum rubrum S1H Rru_A1750 inner-membrane translocator (NCBI) cofit 33 77
  Escherichia coli Nissle 1917 ECOLIN_RS19765 branched chain amino acid ABC transporter permease LivM insig. 31 79
  Klebsiella michiganensis M5al BWI76_RS26340 branched-chain amino acid ABC transporter permease insig. 31 79
  Escherichia fergusonii Becca EFB2_00366 hypothetical protein insig. 31 79
  Pseudomonas fluorescens FW300-N2E3 AO353_17115 leucine/isoleucine/valine transporter permease subunit cofit 30 79
  Escherichia coli ECRC62 BNILDI_02960 livM branched chain amino acid ABC transporter permease LivM insig. 31 79
  Escherichia coli BW25113 b3456 livM leucine/isoleucine/valine transporter subunit (NCBI) strong 31 79
  Marinobacter adhaerens HP15 HP15_2705 inner-membrane translocator cofit 29 92
  Dickeya dianthicola 67-19 HGI48_RS20720 high-affinity branched-chain amino acid ABC transporter permease LivM cofit 31 79
  Dickeya dianthicola ME23 DZA65_RS21730 high-affinity branched-chain amino acid ABC transporter permease LivM insig. 31 79
  Escherichia coli ECOR38 HEPCGN_15570 livM branched chain amino acid ABC transporter permease LivM cofit 31 79
  Escherichia coli BL21 ECD_03305 branched-chain amino acid ABC transporter permease insig. 31 79
  Escherichia coli ECOR27 NOLOHH_08545 livM branched chain amino acid ABC transporter permease LivM cofit 31 79
  Escherichia coli ECRC101 OKFHMN_16750 livM branched chain amino acid ABC transporter permease LivM insig. 31 79
  Escherichia coli ECRC101 MCAODC_07280 livM branched chain amino acid ABC transporter permease LivM insig. 31 79
  Escherichia coli ECRC102 NIAGMN_14520 livM branched chain amino acid ABC transporter permease LivM insig. 31 79
  Escherichia coli ECRC98 JDDGAC_20380 livM branched chain amino acid ABC transporter permease LivM no data 31 79
  Escherichia coli ECRC99 KEDOAH_11390 livM branched chain amino acid ABC transporter permease LivM no data 31 79
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00247 hypothetical protein insig. 31 79
  Cupriavidus basilensis FW507-4G11 RR42_RS34790 ABC transporter permease insig. 31 85
  Pantoea sp. MT58 IAI47_01575 high-affinity branched-chain amino acid ABC transporter permease LivM insig. 30 79
  Azospirillum brasilense Sp245 AZOBR_RS26565 branched-chain amino acid ABC transporter permease insig. 35 82
  Ralstonia sp. UNC404CL21Col ABZR87_RS16590 ABC transporter permease insig. 34 82
  Dickeya dadantii 3937 DDA3937_RS00670 high-affinity branched-chain amino acid ABC transporter permease LivM insig. 31 79
  Variovorax sp. SCN45 GFF4973 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) insig. 28 89
  Rhodopseudomonas palustris CGA009 TX73_019280 branched-chain amino acid ABC transporter permease strong 37 80
  Variovorax sp. OAS795 ABID97_RS00785 branched-chain amino acid ABC transporter permease insig. 33 97
  Herbaspirillum seropedicae SmR1 HSERO_RS08920 ABC transporter insig. 31 76
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2924 ABC transporter for L-leucine/L-isoleucine/L-phenylalanine/D-alanine, permease component 2 LivM (from data) strong 29 91
  Pseudomonas sp. S08-1 OH686_04615 Branched-chain amino acid ABC transporter, permease protein LivM cofit 29 84
  Pseudomonas fluorescens FW300-N2C3 AO356_05330 leucine/isoleucine/valine transporter permease subunit strong 30 83
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4609 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) cofit 29 83
  Pseudomonas fluorescens SBW25 PFLU_RS06635 high-affinity branched-chain amino acid ABC transporter permease LivM cofit 28 98
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06635 high-affinity branched-chain amino acid ABC transporter permease LivM strong 28 98
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2102 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) insig. 40 68
  Pseudomonas syringae pv. syringae B728a Psyr_3847 L-valine ABC transporter membrane protein / L-isoleucine ABC transporter membrane protein / L-leucine ABC transporter membrane protein insig. 29 83
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3847 L-valine ABC transporter membrane protein / L-isoleucine ABC transporter membrane protein / L-leucine ABC transporter membrane protein insig. 29 83
  Burkholderia phytofirmans PsJN BPHYT_RS04435 ABC transporter sig. 33 73
  Pectobacterium carotovorum WPP14 HER17_RS00505 high-affinity branched-chain amino acid ABC transporter permease LivM strong 31 79