Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU2675 | | DNA-binding response regulator, LuxR family (TIGR) | insig. | 100 | 100 |
o | Desulfovibrio vulgaris Miyazaki F | DvMF_1129 | | two component transcriptional regulator, LuxR family (RefSeq) | insig. | 51 | 97 |
| Magnetospirillum magneticum AMB-1 | AMB_RS06830 | | DNA-binding response regulator | insig. | 42 | 93 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_1021 | | two component transcriptional regulator, LuxR family (RefSeq) | strong | 39 | 93 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4833 | | DNA-binding response regulator, LuxR family | sig. | 34 | 93 |
| Pseudomonas sp. SVBP6 | COO64_RS09150 | | response regulator transcription factor | insig. | 34 | 93 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU2577 | | DNA-binding response regulator, LuxR family (TIGR) | strong | 37 | 93 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1296 | | DNA-binding response regulator, LuxR family | strong | 34 | 95 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_24485 | | regulator | insig. | 34 | 93 |
| Rhodanobacter denitrificans MT42 | LRK55_RS11330 | | response regulator transcription factor | insig. | 35 | 93 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS11600 | | response regulator transcription factor | insig. | 35 | 93 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS12850 | | LuxR family transcriptional regulator | strong | 35 | 93 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_25670 | | regulator | sig. | 34 | 95 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_09180 | | DNA-binding response regulator | insig. | 32 | 93 |
| Cellulophaga baltica 18 | M666_RS04555 | | response regulator transcription factor | insig. | 30 | 95 |
| Dinoroseobacter shibae DFL-12 | Dshi_2345 | | two component transcriptional regulator, LuxR family (RefSeq) | insig. | 29 | 94 |
| Lysobacter sp. OAE881 | ABIE51_RS10320 | | response regulator transcription factor | insig. | 34 | 93 |
| Shewanella amazonensis SB2B | Sama_1873 | | response regulator receiver protein (RefSeq) | insig. | 31 | 95 |
| Pseudomonas sp. RS175 | PFR28_01435 | | Response regulator UvrY | insig. | 33 | 93 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_29835 | | LuxR family transcriptional regulator | insig. | 33 | 93 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1774 | | DNA-binding response regulator, LuxR family, near polyamine transporter | insig. | 34 | 93 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS16680 | | hypothetical protein | insig. | 31 | 92 |
| Bifidobacterium breve UCC2003 | BBR_RS14610 | | DNA-binding response regulator | strong | 30 | 93 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS30910 | | response regulator transcription factor | insig. | 37 | 90 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.3859.1 | | Two-component system regulatory protein | sig. | 34 | 90 |
| Pseudomonas stutzeri RCH2 | Psest_0662 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 36 | 93 |
| Rhodanobacter sp000427505 FW510-R12 | LRK53_RS16955 | | response regulator transcription factor | insig. | 35 | 93 |
| Variovorax sp. SCN45 | GFF5818 | | Two-component transcriptional response regulator, NarL/FixJ family | insig. | 35 | 90 |
| Magnetospirillum magneticum AMB-1 | AMB_RS19535 | | DNA-binding response regulator | insig. | 32 | 93 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS32080 | | response regulator transcription factor | insig. | 36 | 93 |
| Kangiella aquimarina DSM 16071 | B158DRAFT_1737 | | two component transcriptional regulator, LuxR family | insig. | 32 | 93 |
| Phaeobacter inhibens DSM 17395 | PGA1_c20200 | | two-component signal transduction system, response regulator | strong | 32 | 93 |
| Rhodopseudomonas palustris CGA009 | TX73_007655 | | response regulator transcription factor | cofit | 36 | 92 |
| Ralstonia solanacearum GMI1000 | RS_RS11600 | | DNA-binding response regulator | insig. | 35 | 88 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5741 | | Nitrate/nitrite response regulator protein | no data | 34 | 92 |
| Dechlorosoma suillum PS | Dsui_1862 | | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 33 | 94 |
| Pseudomonas sp. RS175 | PFR28_01618 | | Oxygen regulatory protein NreC | strong | 33 | 95 |
| Lysobacter sp. OAE881 | ABIE51_RS14590 | | response regulator transcription factor | sig. | 33 | 90 |
| Sphingobium sp. HT1-2 | GFF3503 | | two-component response regulator | cofit | 33 | 94 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4454 | | Transcriptional regulator of fimbriae expression FimZ (LuxR/UhpA family) | insig. | 32 | 95 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS21335 | | response regulator transcription factor | sig. | 35 | 85 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_01935 | | DNA-binding response regulator | sig. | 35 | 90 |
| Rhodanobacter sp. FW510-T8 | OKGIIK_03330 | citB | DNA-binding response regulator | cofit | 35 | 85 |
| Ralstonia solanacearum GMI1000 | RS_RS00100 | | DNA-binding response regulator | strong | 35 | 92 |
| Pseudomonas sp. RS175 | PFR28_01868 | | Transcriptional regulatory protein DegU | no data | 37 | 90 |
| Rhodanobacter denitrificans MT42 | LRK55_RS14195 | | response regulator transcription factor | no data | 35 | 86 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS14480 | | response regulator transcription factor | strong | 35 | 86 |
| Rhodanobacter sp000427505 FW510-R12 | LRK53_RS14100 | | response regulator transcription factor | insig. | 35 | 86 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS30895 | | response regulator transcription factor | insig. | 31 | 89 |
| Pseudomonas lactucae CFBP13502 | GEMAOFIL_03428 | | Nitrate/nitrite response regulator protein NarL | cofit | 34 | 90 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1492 | | Nitrate/nitrite response regulator protein | no data | 34 | 93 |
| Variovorax sp. OAS795 | ABID97_RS22515 | | response regulator transcription factor | strong | 33 | 92 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1128 | | Two-component response regulator | insig. | 35 | 93 |
| Burkholderia phytofirmans PsJN | BPHYT_RS30900 | | transcriptional regulator | sig. | 34 | 92 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_25245 | | regulator | strong | 33 | 93 |
| Serratia liquefaciens MT49 | IAI46_18680 | | two-component system response regulator NarL | insig. | 33 | 91 |
| Pseudomonas sp. SVBP6 | COO64_RS14210 | narL | two-component system response regulator NarL | insig. | 32 | 92 |
| Xanthobacter sp. DMC5 | GFF464 | | Response regulator UvrY | insig. | 35 | 93 |
| Variovorax sp. OAS795 | ABID97_RS28185 | | response regulator transcription factor | insig. | 34 | 90 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_22075 | | hypothetical protein | strong | 33 | 93 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03107 | | two component transcriptional regulator, LuxR family | no data | 34 | 93 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03153 | | two component transcriptional regulator, LuxR family | insig. | 33 | 91 |
| Pseudomonas aeruginosa PA14 | IKLFDK_19985 | | two-component system response regulator NarL | insig. | 32 | 93 |
| Escherichia coli ECOR38 | HEPCGN_06415 | fimZ | fimbria biosynthesis transcriptional regulator FimZ | insig. | 29 | 93 |
| Agrobacterium fabrum C58 | Atu5267 | | two component response regulator | no data | 32 | 93 |
| Cellulophaga baltica 18 | M666_RS08490 | | response regulator transcription factor | insig. | 28 | 93 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.2397.1 | | two-component system regulatory protein | insig. | 36 | 92 |
| Cellulophaga baltica 18 | M666_RS08335 | | response regulator transcription factor | sig. | 33 | 87 |
| Pseudomonas sp. BP01 | JOY50_RS24990 | | response regulator transcription factor | insig. | 32 | 93 |
| Escherichia coli BL21 | ECD_00485 | | response regulator family protein | no data | 29 | 93 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03146 | | Virulence factors putative positive transcription regulator BvgA | insig. | 29 | 93 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_26265 | | LuxR family transcriptional regulator | no data | 35 | 90 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_725 | | Nitrate/nitrite response regulator protein | strong | 32 | 90 |
| Escherichia coli ECOR27 | NOLOHH_00760 | fimZ | fimbria biosynthesis transcriptional regulator FimZ | sig. | 29 | 93 |
| Escherichia coli ECRC100 | OKFHMN_07775 | fimZ | fimbria biosynthesis transcriptional regulator FimZ | no data | 29 | 93 |
| Escherichia coli ECRC101 | MCAODC_26995 | fimZ | fimbria biosynthesis transcriptional regulator FimZ | insig. | 29 | 93 |
| Escherichia coli ECRC102 | NIAGMN_05830 | fimZ | fimbria biosynthesis transcriptional regulator FimZ | no data | 29 | 93 |
| Escherichia coli ECRC62 | BNILDI_22195 | fimZ | fimbria biosynthesis transcriptional regulator FimZ | insig. | 29 | 93 |
| Escherichia coli ECRC98 | JDDGAC_11425 | fimZ | fimbria biosynthesis transcriptional regulator FimZ | insig. | 29 | 93 |
| Escherichia coli ECRC99 | KEDOAH_20195 | fimZ | fimbria biosynthesis transcriptional regulator FimZ | no data | 29 | 93 |
| Escherichia coli BW25113 | b0535 | fimZ | predicted DNA-binding transcriptional regulator (NCBI) | sig. | 29 | 93 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS32890 | | response regulator transcription factor | insig. | 35 | 94 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS33915 | | two-component system response regulator NarL | insig. | 34 | 90 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS04120 | | DNA-binding response regulator | insig. | 32 | 98 |
| Alteromonas macleodii MIT1002 | MIT1002_03526 | | Nitrogen regulation protein C | insig. | 30 | 93 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS09785 | | LuxR family transcriptional regulator | sig. | 36 | 90 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS09500 | | DNA-binding response regulator | insig. | 34 | 92 |
| Ralstonia solanacearum UW163 | UW163_RS04080 | | DNA-binding response regulator | insig. | 34 | 92 |
| Pseudomonas putida KT2440 | PP_2126 | | DNA-binding response regulator, LuxR family | insig. | 33 | 93 |
| Magnetospirillum magneticum AMB-1 | AMB_RS18540 | | DNA-binding response regulator | cofit | 35 | 93 |
| Ralstonia solanacearum PSI07 | RPSI07_RS23850 | | DNA-binding response regulator | cofit | 34 | 92 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS05230 | | response regulator transcription factor | insig. | 34 | 92 |
| Pseudomonas sp. RS175 | PFR28_01628 | | Nitrate/nitrite response regulator protein NarL | insig. | 31 | 90 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS42425 | | response regulator transcription factor | insig. | 34 | 93 |
| Pseudomonas simiae WCS417 | PS417_15740 | | hypothetical protein | insig. | 33 | 90 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2418 | | DNA-binding response regulator, LuxR family | insig. | 32 | 92 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_1897 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | strong | 29 | 89 |
| Burkholderia phytofirmans PsJN | BPHYT_RS22230 | | LuxR family transcriptional regulator | sig. | 35 | 91 |
| Lysobacter sp. OAE881 | ABIE51_RS02650 | | response regulator transcription factor | insig. | 34 | 93 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_25185 | | hypothetical protein | sig. | 31 | 90 |