Homologs of SO4734 from Shewanella oneidensis MR-1

sensory box protein (NCBI ptt file)
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO4734 sensory box protein (NCBI ptt file) sig. 100 100
o Shewanella sp. ANA-3 Shewana3_4120 diguanylate phosphodiesterase (RefSeq) insig. 82 100
o Shewanella amazonensis SB2B Sama_0082 GGDEF domain-containing protein (RefSeq) sig. 40 98
o Shewanella loihica PV-4 Shew_3724 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 38 100
  Shewanella amazonensis SB2B Sama_3627 signal transduction protein (RefSeq) insig. 28 76
  Dechlorosoma suillum PS Dsui_2425 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 29 74
  Azospirillum brasilense Sp245 AZOBR_RS19995 Diguanylate cyclase/phosphodiesterase with PAS/PAC domain strong 28 72
  Acidovorax sp. GW101-3H11 Ac3H11_1143 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) sig. 30 62
  Acidovorax sp. GW101-3H11 Ac3H11_3877 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 29 68
  Acidovorax sp. GW101-3H11 Ac3H11_4268 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 29 72
  Marinobacter adhaerens HP15 HP15_4050 sensory box/GGDEF family protein cofit 27 69
  Burkholderia phytofirmans PsJN BPHYT_RS33250 diguanylate phosphodiesterase insig. 28 59
  Azospirillum sp. SherDot2 MPMX19_01476 hypothetical protein insig. 28 75
  Dechlorosoma suillum PS Dsui_2160 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 29 59
  Pseudomonas stutzeri RCH2 Psest_0338 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 28 71
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2728 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 26 74
  Acidovorax sp. GW101-3H11 Ac3H11_4997 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 28 61
  Synechococcus elongatus PCC 7942 Synpcc7942_1355 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 28 62
  Azospirillum sp. SherDot2 MPMX19_02219 hypothetical protein insig. 25 81
  Acidovorax sp. GW101-3H11 Ac3H11_402 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 29 53
  Paraburkholderia sabiae LMG 24235 QEN71_RS14325 EAL domain-containing protein insig. 28 59
  Caulobacter crescentus NA1000 CCNA_00692 PAS-family GGDEF/EAL protein insig. 26 71
  Caulobacter crescentus NA1000 Δfur CCNA_00692 PAS-family GGDEF/EAL protein cofit 26 71
  Acidovorax sp. GW101-3H11 Ac3H11_2210 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 26 70
  Acidovorax sp. GW101-3H11 Ac3H11_3122 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 27 80
  Herbaspirillum seropedicae SmR1 HSERO_RS12780 diguanylate phosphodiesterase sig. 27 58
  Pseudomonas putida KT2440 PP_1983 PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase insig. 26 74
  Pseudomonas sp. RS175 PFR28_03785 hypothetical protein insig. 28 62
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5083 Serine hydroxymethyltransferase (EC 2.1.2.1) sig. 28 62
  Pseudomonas fluorescens FW300-N2C3 AO356_15730 diguanylate phosphodiesterase insig. 28 62
  Pseudomonas simiae WCS417 PS417_24275 diguanylate phosphodiesterase strong 27 62
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1818 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 27 62
  Pseudomonas fluorescens SBW25 PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase cofit 27 62
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase sig. 27 62
  Acidovorax sp. GW101-3H11 Ac3H11_2319 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 26 69
  Marinobacter adhaerens HP15 HP15_68 sensory box/FOG: EAL domain/GGDEF domain containing protein insig. 25 73
  Pseudomonas sp. S08-1 OH686_11085 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 28 71
  Cupriavidus basilensis FW507-4G11 RR42_RS10125 diguanylate phosphodiesterase insig. 26 59
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4670 Sensory box/GGDEF family protein insig. 29 53
  Azospirillum sp. SherDot2 MPMX19_04839 hypothetical protein insig. 27 53
  Pseudomonas syringae pv. syringae B728a Psyr_0086 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 27 58
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0086 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 27 58
  Rhodopseudomonas palustris CGA009 TX73_004715 EAL domain-containing protein no data 25 75
  Acidovorax sp. GW101-3H11 Ac3H11_1725 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) cofit 27 54
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1452 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 27 63
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2779 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 27 62
  Acidovorax sp. GW101-3H11 Ac3H11_3642 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 28 48
  Rhodospirillum rubrum S1H Rru_A0558 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) (NCBI) insig. 28 54
  Pseudomonas sp. S08-1 OH686_00995 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 25 70
  Pseudomonas sp. RS175 PFR28_02457 putative signaling protein insig. 28 55
  Rahnella sp. WP5 EX31_RS12105 bifunctional diguanylate cyclase/phosphodiesterase insig. 28 54
  Pseudomonas fluorescens FW300-N2E3 AO353_20610 histidine kinase insig. 27 54
  Acidovorax sp. GW101-3H11 Ac3H11_2290 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 27 62
  Pseudomonas fluorescens GW456-L13 PfGW456L13_725 Sensory box/GGDEF family protein insig. 29 58
  Pseudomonas fluorescens FW300-N2E3 AO353_14025 diguanylate phosphodiesterase strong 27 62
  Castellaniella sp019104865 MT123 ABCV34_RS15140 EAL domain-containing protein insig. 28 51
  Ralstonia sp. UNC404CL21Col ABZR87_RS19215 EAL domain-containing protein cofit 25 73
  Shewanella amazonensis SB2B Sama_2448 sensory box protein (RefSeq) insig. 25 68
  Pseudomonas sp. RS175 PFR28_02826 hypothetical protein strong 27 54
  Azospirillum brasilense Sp245 AZOBR_RS04390 signal peptide protein cofit 28 54
  Pseudomonas syringae pv. syringae B728a Psyr_1981 PAS:GGDEF insig. 27 54
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1981 PAS:GGDEF insig. 27 54
  Vibrio cholerae E7946 ATCC 55056 CSW01_13870 sensor domain-containing phosphodiesterase insig. 27 51
  Pseudomonas fluorescens FW300-N2E3 AO353_11530 diguanylate cyclase strong 25 71
  Dechlorosoma suillum PS Dsui_2365 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 27 60
  Pseudomonas fluorescens FW300-N2E3 AO353_22910 histidine kinase insig. 29 51
  Herbaspirillum seropedicae SmR1 HSERO_RS16570 membrane protein insig. 29 54
  Pseudomonas fluorescens SBW25 PFLU_RS29895 EAL domain-containing protein insig. 28 59
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29895 EAL domain-containing protein insig. 28 59
  Dechlorosoma suillum PS Dsui_1531 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 26 72
  Pseudomonas sp. S08-1 OH686_08910 Phytochrome-like protein / Cph2 cofit 24 73
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4790 sensory box/GGDEF domain/EAL domain protein sig. 29 53
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_467 Sensory box/GGDEF family protein insig. 28 53
  Herbaspirillum seropedicae SmR1 HSERO_RS00065 hypothetical protein insig. 28 59
  Dechlorosoma suillum PS Dsui_3449 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 27 56
  Pseudomonas putida KT2440 PP_0672 Sensory box protein sig. 27 62
  Pseudomonas fluorescens FW300-N2C3 AO356_22925 histidine kinase insig. 29 53
  Pseudomonas simiae WCS417 PS417_28235 diguanylate cyclase insig. 28 59
  Marinobacter adhaerens HP15 HP15_4115 sensory box/GGDEF/EAL family protein cofit 29 53
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2007 Sensory box/GGDEF family protein insig. 28 59
  Pseudomonas syringae pv. syringae B728a Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 28 53
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 28 53
  Paraburkholderia sabiae LMG 24235 QEN71_RS13125 EAL domain-containing protein insig. 26 57
  Azospirillum sp. SherDot2 MPMX19_04558 hypothetical protein insig. 25 74
  Kangiella aquimarina DSM 16071 B158DRAFT_0054 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 24 72
  Pseudomonas sp. S08-1 OH686_11550 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 29 48
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3263 Sensory box/GGDEF family protein insig. 28 53
  Vibrio cholerae E7946 ATCC 55056 CSW01_03465 GGDEF-domain containing protein cofit 26 53
  Dechlorosoma suillum PS Dsui_0262 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 28 57
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3950 Sensory box/GGDEF family protein insig. 26 54
  Pseudomonas fluorescens SBW25 PFLU_RS13445 bifunctional diguanylate cyclase/phosphodiesterase insig. 27 53
  Pseudomonas fluorescens SBW25-INTG PFLU_RS13445 bifunctional diguanylate cyclase/phosphodiesterase insig. 27 53
  Pseudomonas fluorescens FW300-N2C3 AO356_21390 histidine kinase insig. 27 54
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_17 Sensory box/GGDEF family protein insig. 26 54
  Pseudomonas fluorescens SBW25 PFLU_RS00935 EAL domain-containing protein cofit 26 60
  Pseudomonas fluorescens SBW25-INTG PFLU_RS00935 EAL domain-containing protein strong 26 60
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_60 Sensory box/GGDEF family protein insig. 25 74
  Pseudomonas stutzeri RCH2 Psest_2562 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 26 64
  Shewanella oneidensis MR-1 SO0341 sensory box protein (NCBI ptt file) insig. 26 63
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2889.1 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 28 52