Homologs of SO4457 from Shewanella oneidensis MR-1

GGDEF domain protein (NCBI ptt file)
SEED: GGDEF family protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO4457 GGDEF domain protein (NCBI ptt file) insig. 100 100
o Shewanella sp. ANA-3 Shewana3_0269 diguanylate cyclase (RefSeq) cofit 93 100
o Vibrio cholerae E7946 ATCC 55056 CSW01_11340 GGDEF domain-containing protein insig. 53 98
o Pectobacterium carotovorum WPP14 HER17_RS13535 sensor domain-containing diguanylate cyclase insig. 51 100
o Methylophilus sp. DMC18 GFF1918 hypothetical protein cofit 48 98
o Pseudomonas sp. S08-1 OH686_05940 GGDEF domain protein cofit 44 94
o Pseudomonas sp. DMC3 GFF2253 hypothetical protein insig. 42 98
o Pseudomonas sp. BP01 JOY50_RS14585 sensor domain-containing diguanylate cyclase insig. 42 98
o Pseudomonas sp. SVBP6 COO64_RS16430 sensor domain-containing diguanylate cyclase insig. 43 95
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4533 hypothetical protein insig. 41 98
o Pseudomonas putida KT2440 PP_1411 GGDEF domain protein insig. 42 98
  Pseudomonas syringae pv. syringae B728a Psyr_1157 diguanylate cyclase with PAS/PAC sensor insig. 47 35
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1157 diguanylate cyclase with PAS/PAC sensor insig. 47 35
  Kangiella aquimarina DSM 16071 B158DRAFT_0954 diguanylate cyclase (GGDEF) domain insig. 44 36
  Kangiella aquimarina DSM 16071 B158DRAFT_0300 diguanylate cyclase (GGDEF) domain insig. 40 42
  Rhodanobacter denitrificans MT42 LRK55_RS01975 GGDEF domain-containing protein insig. 44 34
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS02220 GGDEF domain-containing protein insig. 44 34
  Xanthobacter sp. DMC5 GFF713 hypothetical protein insig. 40 39
  Desulfovibrio vulgaris Miyazaki F DvMF_1537 diguanylate cyclase (RefSeq) insig. 47 33
  Desulfovibrio vulgaris Hildenborough JW710 DVU0416 GGDEF domain protein (TIGR) insig. 36 48
  Rhodanobacter sp. FW510-T8 OKGIIK_09270 Diguanylate cyclase insig. 43 34
  Xanthobacter sp. DMC5 GFF2622 hypothetical protein insig. 26 89
  Azospirillum brasilense Sp245 AZOBR_RS15555 transcriptional regulator insig. 45 35
  Marinobacter adhaerens HP15 HP15_p187g173 protein containing diguanylate cyclase, predicted domains insig. 34 53
  Marinobacter adhaerens HP15 HP15_850 GGDEF domain protein insig. 43 34
  Desulfovibrio vulgaris Miyazaki F DvMF_2758 diguanylate cyclase with PAS/PAC sensor (RefSeq) insig. 43 34
  Magnetospirillum magneticum AMB-1 AMB_RS04735 diguanylate cyclase cofit 41 39
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS07790 GGDEF domain-containing protein insig. 43 34
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00290 hypothetical protein insig. 43 34
  Synechococcus elongatus PCC 7942 Synpcc7942_2535 diguanylate cyclase (GGDEF domain) with PAS/PAC and GAF sensors insig. 43 37
  Pseudomonas fluorescens SBW25 PFLU_RS00425 diguanylate cyclase cofit 43 34
  Pseudomonas fluorescens SBW25-INTG PFLU_RS00425 diguanylate cyclase sig. 43 34
  Magnetospirillum magneticum AMB-1 AMB_RS23415 PAS domain S-box protein cofit 41 39
  Pseudomonas segetis P6 ACVTMO_RS05685 GGDEF domain-containing protein insig. 38 39
  Azospirillum brasilense Sp245 AZOBR_RS16180 diguanylate cyclase strong 46 35
  Magnetospirillum magneticum AMB-1 AMB_RS09815 GGDEF domain-containing protein insig. 44 34
  Rhodospirillum rubrum S1H Rru_A3391 Putative diguanylate cyclase (GGDEF domain) (NCBI) insig. 41 39
  Shewanella amazonensis SB2B Sama_2382 GGDEF family protein (RefSeq) insig. 37 51
  Desulfovibrio vulgaris Miyazaki F DvMF_2637 diguanylate cyclase with extracellular sensor (RefSeq) insig. 40 37
  Pseudomonas sp. S08-1 OH686_17790 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 44 33
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3472.1 sensor histidine kinase insig. 44 32
  Synechocystis sp000284455 PCC 6803 SGL_RS07990 diguanylate cyclase insig. 43 37
  Pseudomonas stutzeri RCH2 Psest_0767 diguanylate cyclase (GGDEF) domain sig. 41 37
  Acidovorax sp. GW101-3H11 Ac3H11_4285 diguanylate cyclase insig. 38 40
  Marinobacter adhaerens HP15 HP15_3345 GGDEF domain protein insig. 43 33
  Magnetospirillum magneticum AMB-1 AMB_RS23425 PAS domain S-box protein insig. 41 39
  Magnetospirillum magneticum AMB-1 AMB_RS23160 PAS domain S-box protein insig. 41 39
  Azospirillum brasilense Sp245 AZOBR_RS09565 diguanylate cyclase insig. 44 33
  Dickeya dianthicola 67-19 HGI48_RS17605 GGDEF domain-containing protein insig. 40 37
  Azospirillum sp. SherDot2 MPMX19_03993 hypothetical protein insig. 38 41
  Herbaspirillum seropedicae SmR1 HSERO_RS09550 diguanylate cyclase insig. 43 34
  Azospirillum sp. SherDot2 MPMX19_00642 Diguanylate cyclase VdcA insig. 42 33
  Pseudomonas sp. DMC3 GFF982 putative diguanylate cyclase DgcC cofit 40 37
  Methylophilus sp. DMC18 GFF1420 hypothetical protein cofit 43 34
  Pseudomonas fluorescens FW300-N2E3 AO353_02110 hypothetical protein insig. 43 32
  Ralstonia solanacearum PSI07 RPSI07_RS09290 GGDEF domain-containing protein insig. 42 35
  Dickeya dianthicola ME23 DZA65_RS18730 diguanylate cyclase insig. 39 37
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1642 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor insig. 39 38
  Rhodanobacter denitrificans MT42 LRK55_RS13850 GGDEF domain-containing protein insig. 45 33
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS14130 GGDEF domain-containing protein insig. 45 33
  Pseudomonas simiae WCS417 PS417_00435 DeoR faimly transcriptional regulator insig. 42 34
  Marinobacter adhaerens HP15 HP15_3803 GGDEF domain-like protein insig. 42 34
  Shewanella loihica PV-4 Shew_3023 diguanylate cyclase (RefSeq) insig. 42 35
  Magnetospirillum magneticum AMB-1 AMB_RS17460 PAS domain S-box protein cofit 43 37
  Pseudomonas sp. SVBP6 COO64_RS05290 diguanylate cyclase insig. 35 44
  Pseudomonas orientalis W4I3 QF045_RS03380 diguanylate cyclase insig. 41 34
  Azospirillum brasilense Sp245 AZOBR_RS06990 response regulator receiver modulated diguanylate cyclase insig. 41 34
  Dickeya dadantii 3937 DDA3937_RS17585 GGDEF domain-containing protein insig. 39 37
  Azospirillum sp. SherDot2 MPMX19_04554 Response regulator PleD sig. 45 33
  Pseudomonas fluorescens FW300-N2C3 AO356_03505 hypothetical protein insig. 43 33
  Rhodopseudomonas palustris CGA009 TX73_020695 diguanylate cyclase insig. 40 42
  Agrobacterium fabrum C58 Atu2179 GGDEF family protein insig. 39 36
  Pseudomonas syringae pv. syringae B728a Psyr_2110 diguanylate cyclase with PAS/PAC sensor insig. 38 36
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2110 diguanylate cyclase with PAS/PAC sensor insig. 38 36
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04054 hypothetical protein cofit 42 32
  Shewanella oneidensis MR-1 SO3489 GGDEF domain protein (NCBI ptt file) insig. 41 34
  Ralstonia sp. UNC404CL21Col ABZR87_RS16760 GGDEF domain-containing protein insig. 41 34
  Pectobacterium carotovorum WPP14 HER17_RS05020 sensor domain-containing diguanylate cyclase cofit 39 37
  Pseudomonas sp. RS175 PFR28_04630 hypothetical protein insig. 41 33
  Synechococcus elongatus PCC 7942 Synpcc7942_1811 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor sig. 40 37
  Pseudomonas sp. S08-1 OH686_03075 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 38 37
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04378 hypothetical protein cofit 30 66
o Acinetobacter radioresistens SK82 MPMX26_00896 hypothetical protein no data 25 97
  Shewanella oneidensis MR-1 SO2049 GGDEF family protein (NCBI ptt file) insig. 46 33
  Pseudomonas stutzeri RCH2 Psest_3165 diguanylate cyclase (GGDEF) domain insig. 43 33
  Azospirillum sp. SherDot2 MPMX19_01522 Response regulator PleD insig. 43 35
  Rhizobium sp. OAE497 ABIE40_RS07330 PleD family two-component system response regulator cofit 43 33
  Sinorhizobium meliloti 1021 SMc01370 response regulator PleD insig. 42 33
  Methylophilus sp. DMC18 GFF906 hypothetical protein insig. 40 36
  Pseudomonas stutzeri RCH2 Psest_2106 diguanylate cyclase (GGDEF) domain sig. 38 38
  Pseudomonas sp. DMC3 GFF4685 hypothetical protein insig. 41 33
  Synechocystis sp000284455 PCC 6803 SGL_RS15895 diguanylate cyclase insig. 39 37
  Rhodopseudomonas palustris CGA009 TX73_016195 PleD family two-component system response regulator insig. 42 33
  Alteromonas macleodii MIT1002 MIT1002_00511 Bacteriophytochrome cph2 insig. 41 35
  Alteromonas macleodii MIT1002 MIT1002_01203 putative diguanylate cyclase YcdT insig. 40 34
  Desulfovibrio vulgaris Miyazaki F DvMF_1477 diguanylate cyclase with PAS/PAC sensor (RefSeq) sig. 38 38
  Pseudomonas sp. RS175 PFR28_00898 hypothetical protein cofit 41 33
  Desulfovibrio vulgaris Hildenborough JW710 DVU1805 GGDEF domain protein (TIGR) insig. 41 35
  Magnetospirillum magneticum AMB-1 AMB_RS23435 GGDEF domain-containing protein insig. 40 38
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2528 GGDEF domain protein insig. 42 32