Homologs of SO3694 from Shewanella oneidensis MR-1

conserved hypothetical protein (NCBI ptt file)
SEED: ABC transporter permease
KEGG: HlyD family secretion protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO3694 conserved hypothetical protein (NCBI ptt file) insig. 100 100
o Shewanella sp. ANA-3 Shewana3_3262 RND family efflux transporter MFP subunit (RefSeq) cofit 90 100
o Shewanella loihica PV-4 Shew_0721 RND family efflux transporter MFP subunit (RefSeq) insig. 67 100
o Shewanella amazonensis SB2B Sama_2865 HlyD family secretion protein (RefSeq) insig. 59 100
o Lysobacter sp. OAE881 ABIE51_RS18325 HlyD family efflux transporter periplasmic adaptor subunit insig. 42 100
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4555.1 ABC transporter permease insig. 39 100
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS10620 efflux RND transporter periplasmic adaptor subunit insig. 38 100
o Rhodanobacter sp. FW510-T8 OKGIIK_11335 efflux transporter periplasmic adaptor subunit sig. 39 100
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS04450 efflux RND transporter periplasmic adaptor subunit strong 42 87
o Rhodanobacter denitrificans MT42 LRK55_RS04225 efflux RND transporter periplasmic adaptor subunit strong 41 100
o Bacteroides ovatus ATCC 8483 BACOVA_04196 efflux transporter, RND family, MFP subunit insig. 23 97
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS14405 HlyD family efflux transporter periplasmic adaptor subunit insig. 24 95
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03355 efflux RND transporter periplasmic adaptor subunit insig. 23 97
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS04170 transporter insig. 23 95
o Bacteroides thetaiotaomicron VPI-5482 BT1467 ABC transporter permease (NCBI ptt file) insig. 24 93
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS03990 HlyD family efflux transporter periplasmic adaptor subunit insig. 26 88
o Phocaeicola dorei CL03T12C01 ABI39_RS17670 efflux RND transporter periplasmic adaptor subunit insig. 23 97
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS08590 HlyD family efflux transporter periplasmic adaptor subunit cofit 24 94
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05975 HlyD family efflux transporter periplasmic adaptor subunit insig. 23 90
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02270 efflux transporter periplasmic adaptor subunit insig. 22 91
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS15755 HlyD family efflux transporter periplasmic adaptor subunit strong 23 91
  Phocaeicola dorei CL03T12C01 ABI39_RS11735 HlyD family efflux transporter periplasmic adaptor subunit strong 23 91
o Rahnella sp. WP5 EX31_RS02535 HlyD family efflux transporter periplasmic adaptor subunit insig. 22 94
  Bacteroides thetaiotaomicron VPI-5482 BT0858 conserved hypothetical protein (NCBI ptt file) sig. 23 90
  Bacteroides thetaiotaomicron VPI-5482 BT1536 ABC transporter permease (NCBI ptt file) strong 23 88
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS01160 HlyD family efflux transporter periplasmic adaptor subunit strong 21 90
  Phocaeicola dorei CL03T12C01 ABI39_RS16575 HlyD family efflux transporter periplasmic adaptor subunit insig. 21 90
  Bacteroides ovatus ATCC 8483 BACOVA_04274 efflux transporter, RND family, MFP subunit insig. 24 87
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS12150 efflux RND transporter periplasmic adaptor subunit insig. 22 93
  Rhodanobacter denitrificans MT42 LRK55_RS11815 HlyD family efflux transporter periplasmic adaptor subunit cofit 23 89
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS12080 HlyD family efflux transporter periplasmic adaptor subunit insig. 23 89
  Lysobacter sp. OAE881 ABIE51_RS09285 efflux RND transporter periplasmic adaptor subunit insig. 29 74
o Bacteroides stercoris CC31F HMPREF1181_RS15585 HlyD family efflux transporter periplasmic adaptor subunit strong 22 92
  Desulfovibrio vulgaris Miyazaki F DvMF_2956 efflux transporter, RND family, MFP subunit (RefSeq) strong 26 88
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2439.1 Probable Co/Zn/Cd efflux system membrane fusion protein insig. 28 71
  Bacteroides ovatus ATCC 8483 BACOVA_02583 efflux transporter, RND family, MFP subunit insig. 22 86
  Dechlorosoma suillum PS Dsui_1556 RND family efflux transporter, MFP subunit insig. 26 42
  Alteromonas macleodii MIT1002 MIT1002_00425 Cation efflux system protein CzcB cofit 24 58
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS06490 efflux RND transporter periplasmic adaptor subunit insig. 20 93
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_13035 MexH family multidrug efflux RND transporter periplasmic adaptor subunit insig. 23 39
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_20135 hypothetical protein insig. 24 68
  Erwinia tracheiphila SCR3 LU632_RS22040 HlyD family efflux transporter periplasmic adaptor subunit insig. 25 53
  Pseudomonas sp. S08-1 OH686_22665 Probable RND efflux membrane fusion protein cofit 28 37
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS13075 efflux RND transporter periplasmic adaptor subunit insig. 21 93
  Vibrio cholerae E7946 ATCC 55056 CSW01_04690 MexH family multidrug efflux RND transporter periplasmic adaptor subunit insig. 26 60
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS12420 efflux RND transporter periplasmic adaptor subunit insig. 22 87
  Cupriavidus basilensis FW507-4G11 RR42_RS15650 hemolysin D insig. 29 34
  Kangiella aquimarina DSM 16071 B158DRAFT_1543 Multidrug resistance efflux pump insig. 24 74
  Shewanella loihica PV-4 Shew_1177 RND family efflux transporter MFP subunit (RefSeq) insig. 25 55
  Bosea sp. OAE506 ABIE41_RS07730 efflux RND transporter periplasmic adaptor subunit insig. 23 37
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4617 Membrane-fusion protein cofit 23 85
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1772 Probable Co/Zn/Cd efflux system membrane fusion protein insig. 27 52
  Escherichia coli BL21 ECD_02540 multidrug efflux system strong 24 55
  Escherichia fergusonii Becca EFB2_01243 Multidrug export protein EmrA insig. 24 55
  Escherichia coli ECOR27 NOLOHH_12620 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA cofit 24 55
  Escherichia coli ECOR38 HEPCGN_19975 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA cofit 24 55
  Escherichia coli ECRC62 BNILDI_11180 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA insig. 24 55
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01048 Multidrug export protein EmrA cofit 24 55
  Escherichia coli Nissle 1917 ECOLIN_RS14965 multidrug efflux MFS transporter periplasmic adaptor subunit EmrA insig. 24 55
  Escherichia coli BW25113 b2685 emrA multidrug efflux system (NCBI) strong 24 55
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4731 RND efflux membrane fusion protein insig. 22 65
  Pseudomonas fluorescens SBW25 PFLU_RS24400 efflux RND transporter periplasmic adaptor subunit insig. 27 60
  Pseudomonas fluorescens SBW25-INTG PFLU_RS24400 efflux RND transporter periplasmic adaptor subunit insig. 27 60
  Azospirillum sp. SherDot2 MPMX19_00827 Multidrug resistance protein MdtA insig. 25 62
  Rhodospirillum rubrum S1H Rru_A2095 Secretion protein HlyD (NCBI) insig. 27 37
  Azospirillum sp. SherDot2 MPMX19_05611 Multidrug resistance protein MdtA insig. 27 40
  Pseudomonas simiae WCS417 PS417_22750 RND transporter insig. 26 60
  Escherichia coli ECRC101 OKFHMN_20780 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA insig. 23 55
  Escherichia coli ECRC101 MCAODC_11305 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA insig. 23 55
  Escherichia coli ECRC102 NIAGMN_18550 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA insig. 23 55
  Escherichia coli ECRC98 JDDGAC_24445 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA no data 23 55
  Escherichia coli ECRC99 KEDOAH_07355 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA no data 23 55
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5615 Probable Co/Zn/Cd efflux system membrane fusion protein sig. 26 53
  Shewanella loihica PV-4 Shew_1649 RND family efflux transporter MFP subunit (RefSeq) strong 26 57
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1712 RND family efflux transporter, MFP subunit insig. 25 46
  Azospirillum brasilense Sp245 AZOBR_RS14650 RND transporter no data 28 42
  Rhodopseudomonas palustris CGA009 TX73_019550 efflux RND transporter periplasmic adaptor subunit cofit 29 32
  Marinobacter adhaerens HP15 HP15_3694 efflux transporter, RND family, MFP subunit insig. 25 47
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0680 RND family efflux transporter, MFP subunit sig. 23 43
  Magnetospirillum magneticum AMB-1 AMB_RS20235 HlyD family secretion protein cofit 23 70
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2835 RND family efflux transporter, MFP subunit strong 22 91
  Shewanella oneidensis MR-1 SO3483 HlyD family secretion protein (NCBI ptt file) sig. 27 51
  Bacteroides thetaiotaomicron VPI-5482 BT0298 cation efflux system protein (outer membrane protein) (NCBI ptt file) insig. 19 88
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1592 Multidrug resistance protein A sig. 24 57
  Vibrio cholerae E7946 ATCC 55056 CSW01_00855 MexH family multidrug efflux RND transporter periplasmic adaptor subunit cofit 27 43
  Pseudomonas simiae WCS417 PS417_06110 RND transporter insig. 26 42
  Azospirillum sp. SherDot2 MPMX19_04494 p-hydroxybenzoic acid efflux pump subunit AaeA insig. 30 43
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3058 Membrane fusion component of tripartite multidrug resistance system insig. 25 54
  Pseudomonas stutzeri RCH2 Psest_1792 RND family efflux transporter, MFP subunit insig. 25 74
  Shewanella amazonensis SB2B Sama_1470 membrane-fusion protein (RefSeq) insig. 25 57
  Shewanella oneidensis MR-1 SO1881 HlyD family-related protein (NCBI ptt file) insig. 26 40
  Enterobacter asburiae PDN3 EX28DRAFT_2768 efflux pump membrane protein (multidrug resistance protein A) insig. 25 47
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_03180 efflux transporter periplasmic adaptor subunit strong 24 56
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1261.1 Membrane fusion protein of RND family multidrug efflux pump insig. 24 42
  Marinobacter adhaerens HP15 HP15_3261 efflux transporter, RND family, MFP subunit strong 22 73
  Enterobacter sp. TBS_079 MPMX20_03563 Multidrug export protein EmrA insig. 25 47
  Pseudomonas sp. RS175 PFR28_03329 Multidrug export protein AcrE insig. 25 57
  Rhizobium sp. OAE497 ABIE40_RS17050 efflux RND transporter periplasmic adaptor subunit strong 23 77
  Shewanella amazonensis SB2B Sama_0139 secretion protein HlyD (RefSeq) insig. 22 74
  Pseudomonas fluorescens SBW25 PFLU_RS06180 efflux RND transporter periplasmic adaptor subunit insig. 22 71