Homologs of SO1887 from Shewanella oneidensis MR-1

conserved hypothetical protein (NCBI ptt file)
SEED: Putative intracellular protease/amidase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO1887 conserved hypothetical protein (NCBI ptt file) insig. 100 100
o Shewanella sp. ANA-3 Shewana3_1664 ThiJ/PfpI domain-containing protein (RefSeq) insig. 95 100
o Shewanella loihica PV-4 Shew_2856 ThiJ/PfpI domain-containing protein (RefSeq) insig. 66 99
o Pseudomonas fluorescens FW300-N2C3 AO356_29465 thiamine biosynthesis protein ThiJ insig. 54 98
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_263 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain insig. 53 98
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5141 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain insig. 52 98
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03706 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain insig. 38 98
  Burkholderia phytofirmans PsJN BPHYT_RS10435 ThiJ/PfpI domain-containing protein insig. 37 82
  Paraburkholderia sabiae LMG 24235 QEN71_RS38975 DJ-1/PfpI family protein insig. 40 82
o Ralstonia solanacearum PSI07 RPSI07_RS13735 transcriptional regulator sig. 35 93
o Ralstonia sp. UNC404CL21Col ABZR87_RS17000 DJ-1/PfpI family protein insig. 36 93
o Pseudomonas fluorescens FW300-N2E3 AO353_23085 AraC family transcriptional regulator insig. 33 93
o Acidovorax sp. GW101-3H11 Ac3H11_4341 ThiJ/PfpI family protein insig. 38 93
o Variovorax sp. SCN45 GFF2410 Intracellular protease insig. 33 93
o Sphingomonas koreensis DSMZ 15582 Ga0059261_1841 Putative amidotransferase insig. 35 91
o Sphingobium sp. HT1-2 GFF3108 Intracellular protease cofit 35 91
o Pseudomonas segetis P6 MPMX49_00012 hypothetical protein insig. 35 92
o Variovorax sp. OAS795 ABID97_RS05615 DJ-1/PfpI family protein sig. 35 94
  Ralstonia sp. UNC404CL21Col ABZR87_RS16985 DJ-1/PfpI family protein insig. 25 77
  Enterobacter asburiae PDN3 EX28DRAFT_1218 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain insig. 29 89
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS03375 GlxA family transcriptional regulator insig. 31 75
  Sinorhizobium meliloti 1021 SM_b20215 transcriptional regulator insig. 27 96
  Synechococcus elongatus PCC 7942 Synpcc7942_B2643 ThiJ family protein insig. 32 56
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3870 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain insig. 28 86
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1689 Putative amidotransferase insig. 25 77
  Azospirillum brasilense Sp245 AZOBR_RS11500 dimethylglycine dehydrogenase no data 26 86
  Pseudomonas segetis P6 MPMX49_01857 HTH-type transcriptional regulator CdhR insig. 32 58
  Pseudomonas simiae WCS417 PS417_16125 AraC family transcriptional regulator insig. 29 79
  Burkholderia phytofirmans PsJN BPHYT_RS25285 AraC family transcriptional regulator insig. 28 95
  Enterobacter sp. TBS_079 MPMX20_02247 HTH-type transcriptional regulator CdhR insig. 28 89
  Phaeobacter inhibens DSM 17395 PGA1_c15870 transcriptional regulator, AraC family strong 28 74
  Pseudomonas simiae WCS417 PS417_09665 dimethylglycine dehydrogenase insig. 26 94
  Rhodospirillum rubrum S1H Rru_A1577 ThiJ/PfpI (NCBI) no data 30 95
  Pseudomonas fluorescens SBW25 PFLU_RS10270 DJ-1/PfpI family protein insig. 25 88
  Pseudomonas fluorescens SBW25-INTG PFLU_RS10270 DJ-1/PfpI family protein sig. 25 88
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02136 Isonitrile hydratase cofit 26 88
  Pseudomonas stutzeri RCH2 Psest_0067 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain insig. 38 42
  Pseudomonas fluorescens SBW25 PFLU_RS18095 GlxA family transcriptional regulator insig. 28 79
  Pseudomonas fluorescens SBW25-INTG PFLU_RS18095 GlxA family transcriptional regulator sig. 28 79
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5920 Transcriptional regulator, AraC family insig. 28 79
  Sphingobium sp. HT1-2 GFF4117 Intracellular protease insig. 25 81
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02631 HTH-type transcriptional regulator CdhR cofit 27 79
  Pseudomonas sp. DMC3 GFF2974 HTH-type transcriptional regulator CdhR insig. 30 53
  Pseudomonas simiae WCS417 PS417_27095 AraC family transcriptional regulator insig. 29 77
  Pseudomonas fluorescens SBW25 PFLU_RS28745 GlxA family transcriptional regulator insig. 28 77
  Pseudomonas fluorescens SBW25-INTG PFLU_RS28745 GlxA family transcriptional regulator insig. 28 77
  Pseudomonas sp. DMC3 GFF931 HTH-type transcriptional regulator CdhR cofit 28 75
  Caulobacter crescentus NA1000 CCNA_03055 AraC-family transcriptional regulator insig. 25 77
  Caulobacter crescentus NA1000 Δfur CCNA_03055 AraC-family transcriptional regulator cofit 25 77
  Ralstonia solanacearum PSI07 RPSI07_RS03345 DJ-1/PfpI family protein insig. 22 88
  Azospirillum brasilense Sp245 AZOBR_RS26585 AraC family transcriptional regulator insig. 31 69
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS17995 helix-turn-helix domain-containing protein insig. 29 66
  Caulobacter crescentus NA1000 CCNA_01858 AraC-family transcriptional regulator cofit 28 83
  Caulobacter crescentus NA1000 Δfur CCNA_01858 AraC-family transcriptional regulator cofit 28 83
  Pseudomonas fluorescens FW300-N2E3 AO353_22235 AraC family transcriptional regulator insig. 27 75
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.761.1 ThiJ/PfpI family protein insig. 27 84
  Pseudomonas sp. DMC3 GFF1101 HTH-type transcriptional regulator CdhR insig. 36 44
  Serratia liquefaciens MT49 IAI46_16680 GlxA family transcriptional regulator cofit 32 48
  Pseudomonas fluorescens FW300-N2C3 AO356_21920 AraC family transcriptional regulator insig. 27 78
  Xanthobacter sp. DMC5 GFF683 hypothetical protein insig. 33 77
  Pseudomonas sp. RS175 PFR28_02656 HTH-type transcriptional regulator CdhR strong 26 78
  Variovorax sp. SCN45 GFF6230 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain insig. 26 96
  Azospirillum sp. SherDot2 MPMX19_01004 HTH-type transcriptional regulator CdhR insig. 30 82
  Pseudomonas aeruginosa PA14 IKLFDK_19480 AraC family transcriptional regulator insig. 27 75
  Rhodopseudomonas palustris CGA009 TX73_012535 GlxA family transcriptional regulator insig. 30 64
  Pseudomonas sp. RS175 PFR28_02652 HTH-type transcriptional regulator CdhR insig. 30 69
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2368 ThiJ/PfpI family protein insig. 29 57
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1673 transcriptional regulator, AraC family with amidase-like domain insig. 34 62
  Pseudomonas fluorescens FW300-N2E3 AO353_19575 dimethylglycine dehydrogenase sig. 23 88
  Rhodopseudomonas palustris CGA009 TX73_012530 DJ-1/PfpI family protein insig. 24 88
  Sinorhizobium meliloti 1021 SMa1476 AraC family transcriptional regulator insig. 31 52
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03723 transcriptional regulator, AraC family with amidase-like domain insig. 31 61
  Pseudomonas fluorescens FW300-N2C3 AO356_21945 AraC family transcriptional regulator insig. 29 75
  Ralstonia sp. UNC404CL21Col ABZR87_RS16980 GlxA family transcriptional regulator insig. 28 96
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4334 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain insig. 27 63
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS01780 helix-turn-helix domain-containing protein insig. 26 76
  Bosea sp. OAE506 ABIE41_RS09540 transcriptional regulator FtrA insig. 29 73
  Pseudomonas fluorescens SBW25 PFLU_RS11095 GlxA family transcriptional regulator insig. 27 63
  Pseudomonas fluorescens SBW25-INTG PFLU_RS11095 GlxA family transcriptional regulator insig. 27 63
  Rhizobium sp. OAE497 ABIE40_RS14485 transcriptional regulator FtrA insig. 25 78
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06617 cyclohexyl-isocyanide hydratase no data 24 88
  Klebsiella michiganensis M5al BWI76_RS15355 transcriptional regulator FtrA insig. 32 54
  Burkholderia phytofirmans PsJN BPHYT_RS00535 AraC family transcriptional regulator insig. 31 54
  Azospirillum brasilense Sp245 AZOBR_RS26865 AraC family transcriptional regulator insig. 30 59
  Agrobacterium fabrum C58 Atu5390 AraC family transcriptional regulator no data 28 48
  Pseudomonas fluorescens FW300-N2E3 AO353_28190 AraC family transcriptional regulator sig. 27 63
  Escherichia coli ECRC100 OKFHMN_01050 ftrA transcriptional regulator FtrA no data 27 70
  Escherichia coli ECRC101 MCAODC_16875 ftrA transcriptional regulator FtrA insig. 27 70
  Escherichia coli ECRC102 NIAGMN_25195 ftrA transcriptional regulator FtrA insig. 27 70
  Escherichia coli ECRC98 JDDGAC_03560 ftrA transcriptional regulator FtrA insig. 27 70
  Escherichia coli ECRC99 KEDOAH_27380 ftrA transcriptional regulator FtrA no data 27 70
  Sphingobium sp. HT1-2 GFF5085 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain cofit 27 62
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_247 Transcriptional regulator, AraC family insig. 26 78
  Pseudomonas sp. S08-1 OH686_02370 Transcriptional regulator, AraC family insig. 26 89
  Pseudomonas segetis P6 MPMX49_00481 HTH-type transcriptional regulator CdhR insig. 25 77
  Agrobacterium fabrum C58 Atu5341 AraC family transcriptional regulator no data 24 77
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS19840 DJ-1/PfpI family protein insig. 22 88
  Ralstonia solanacearum UW163 UW163_RS19335 DJ-1/PfpI family protein insig. 22 88
  Sinorhizobium meliloti 1021 SMc02609 transcriptional regulator insig. 38 39
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3574 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain insig. 37 42