Homologs of ydhC from Escherichia coli BW25113

ydhC: predicted transporter (NCBI)
SEED: Putative transport protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Escherichia coli BW25113 b1660 ydhC predicted transporter (NCBI) strong 100 100
o Escherichia coli BL21 ECD_01631 putative arabinose efflux transporter no data 100 100
o Escherichia coli ECOR27 NOLOHH_17895 punC purine nucleoside transporter PunC insig. 100 100
o Escherichia coli ECRC62 BNILDI_16685 punC purine nucleoside transporter PunC insig. 100 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02064 Inner membrane transport protein YdhC insig. 100 100
o Escherichia fergusonii Becca EFB2_02332 Inner membrane transport protein YdhC insig. 99 100
o Escherichia coli Nissle 1917 ECOLIN_RS09255 purine nucleoside transporter PunC insig. 99 100
o Escherichia coli ECRC100 OKFHMN_27375 punC purine nucleoside transporter PunC cofit 100 100
o Escherichia coli ECRC101 MCAODC_18035 punC purine nucleoside transporter PunC insig. 100 100
o Escherichia coli ECRC102 NIAGMN_00690 punC purine nucleoside transporter PunC strong 100 100
o Escherichia coli ECRC98 JDDGAC_01965 punC purine nucleoside transporter PunC insig. 100 100
o Escherichia coli ECRC99 KEDOAH_00735 punC purine nucleoside transporter PunC no data 100 100
o Escherichia coli ECOR38 HEPCGN_05760 punC purine nucleoside transporter PunC insig. 99 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3616 Putative transport protein insig. 85 100
o Enterobacter asburiae PDN3 EX28DRAFT_1657 drug resistance transporter, Bcr/CflA subfamily insig. 78 99
o Enterobacter sp. TBS_079 MPMX20_01976 Inner membrane transport protein YdhC strong 77 99
o Klebsiella pneumoniae MKP103 KDGMDA_23480 purine nucleoside transporter PunC insig. 75 96
o Klebsiella michiganensis M5al BWI76_RS16520 Bcr/CflA family multidrug efflux MFS transporter strong 73 99
o Serratia liquefaciens MT49 IAI46_11230 Bcr/CflA family multidrug efflux MFS transporter insig. 64 98
o Rahnella sp. WP5 EX31_RS13840 Bcr/CflA family multidrug efflux MFS transporter insig. 59 100
o Erwinia amylovora T8 OLJFJH_14520 purine nucleoside transporter PunC insig. 63 94
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS17785 Bcr/CflA family multidrug efflux MFS transporter cofit 59 97
o Pantoea sp. MT58 IAI47_10805 Bcr/CflA family multidrug efflux MFS transporter sig. 60 96
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01743 Inner membrane transport protein YdhC cofit 60 95
o Erwinia tracheiphila SCR3 LU632_RS11180 Bcr/CflA family multidrug efflux MFS transporter insig. 62 94
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_25175 punC purine nucleoside transporter PunC cofit 61 94
o Pseudomonas simiae WCS417 PS417_08035 adenine transporter (MFS superfamily) (from data) strong 59 95
o Pseudomonas orientalis W4I3 QF045_RS10755 purine nucleoside transporter PunC cofit 60 95
o Pseudomonas fluorescens SBW25 PFLU_RS08005 Bcr/CflA family multidrug efflux MFS transporter insig. 57 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS08005 Bcr/CflA family multidrug efflux MFS transporter insig. 57 99
o Shewanella sp. ANA-3 Shewana3_2062 inner membrane transport protein YdhC (RefSeq) strong 42 93
o Shewanella oneidensis MR-1 SO2373 drug resistance transporter, Bcr/CflA family protein (NCBI ptt file) sig. 43 83
o Vibrio cholerae E7946 ATCC 55056 CSW01_13985 Bcr/CflA family drug resistance efflux transporter cofit 46 83
o Shewanella amazonensis SB2B Sama_1784 inner membrane transport protein YdhC (RefSeq) sig. 40 92
o Shewanella loihica PV-4 Shew_2012 inner membrane transport protein YdhC (RefSeq) sig. 41 86
  Rahnella sp. WP5 EX31_RS17685 multidrug effflux MFS transporter insig. 30 90
  Marinobacter adhaerens HP15 HP15_3564 drug resistance transporter, Bcr/CflA subfamily sig. 31 86
  Herbaspirillum seropedicae SmR1 HSERO_RS23560 MFS transporter insig. 32 92
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS08155 Bcr/CflA family drug resistance efflux transporter sig. 32 97
  Pseudomonas stutzeri RCH2 Psest_0741 drug resistance transporter, Bcr/CflA subfamily sig. 35 83
  Marinobacter adhaerens HP15 HP15_26 drug resistance transporter, Bcr/CflA family protein insig. 31 90
  Cupriavidus basilensis FW507-4G11 RR42_RS28940 Bcr/CflA family drug resistance efflux transporter cofit 32 92
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3352 drug resistance transporter, Bcr/CflA subfamily strong 29 85
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS00225 multidrug effflux MFS transporter strong 36 66
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_01830 Bcr/CflA family drug resistance efflux transporter insig. 31 84
  Bosea sp. OAE506 ABIE41_RS02750 multidrug effflux MFS transporter sig. 33 82
  Pantoea sp. MT58 IAI47_06590 Bcr/CflA family multidrug efflux MFS transporter insig. 32 83
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS03440 Bcr/CflA family drug resistance efflux transporter insig. 31 96
  Ralstonia solanacearum UW163 UW163_RS10230 Bcr/CflA family drug resistance efflux transporter insig. 31 96
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS00675 Bcr/CflA family multidrug efflux MFS transporter cofit 31 83
  Magnetospirillum magneticum AMB-1 AMB_RS01475 MFS transporter cofit 32 64
  Ralstonia solanacearum GMI1000 RS_RS10900 Bcr/CflA family drug resistance efflux transporter insig. 32 95
  Ralstonia sp. UNC404CL21Col ABZR87_RS15340 multidrug effflux MFS transporter insig. 32 94
  Ralstonia solanacearum PSI07 RPSI07_RS00615 MFS transporter insig. 28 87
  Pseudomonas segetis P6 MPMX49_01117 Bicyclomycin resistance protein insig. 36 57
  Ralstonia solanacearum PSI07 RPSI07_RS13775 MFS transporter insig. 32 89
  Pseudomonas aeruginosa PA14 IKLFDK_21300 Bcr/CflA family multidrug efflux MFS transporter insig. 32 85
o Sinorhizobium meliloti 1021 SMc03825 transporter insig. 29 84
  Pseudomonas aeruginosa MRSN321 DY961_RS28160 Bcr/CflA family multidrug efflux MFS transporter insig. 32 85
  Pseudomonas putida KT2440 PP_0589 Bcr/CflA family multidrug resistance transporter sig. 34 58
  Pseudomonas aeruginosa PUPa3 DQ20_RS47480 Bcr/CflA family multidrug efflux MFS transporter sig. 32 85
  Pseudomonas sp. SVBP6 COO64_RS26355 multidrug effflux MFS transporter insig. 32 58
  Azospirillum sp. SherDot2 MPMX19_06022 Bicyclomycin resistance protein insig. 31 83
  Variovorax sp. SCN45 GFF1385 Multidrug resistance transporter, Bcr/CflA family insig. 31 81
  Pseudomonas sp. BP01 JOY50_RS23280 multidrug effflux MFS transporter insig. 34 58
  Variovorax sp. SCN45 GFF2880 Multidrug resistance transporter, Bcr/CflA family insig. 31 94
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS22540 Bcr/CflA family drug resistance efflux transporter insig. 28 87
  Ralstonia solanacearum UW163 UW163_RS23085 Bcr/CflA family drug resistance efflux transporter insig. 28 87
  Paraburkholderia graminis OAS925 ABIE53_005658 DHA1 family bicyclomycin/chloramphenicol resistance-like MFS transporter sig. 29 87
  Pseudomonas sp. S08-1 OH686_07365 Multidrug resistance transporter, Bcr/CflA family insig. 36 58
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS13175 multidrug effflux MFS transporter insig. 30 88
o Dinoroseobacter shibae DFL-12 Dshi_0717 drug resistance transporter, Bcr/CflA subfamily (RefSeq) insig. 28 97
  Escherichia coli ECRC100 OKFHMN_23365 bcr multidrug efflux MFS transporter Bcr cofit 30 80
  Escherichia coli ECOR38 HEPCGN_22630 bcr multidrug efflux MFS transporter Bcr insig. 29 80
  Escherichia coli ECRC101 MCAODC_14415 bcr multidrug efflux MFS transporter Bcr strong 29 80
  Escherichia coli ECRC102 NIAGMN_21130 bcr multidrug efflux MFS transporter Bcr insig. 29 80
  Escherichia coli ECRC98 JDDGAC_27325 bcr multidrug efflux MFS transporter Bcr insig. 29 80
  Escherichia coli ECRC99 KEDOAH_04820 bcr multidrug efflux MFS transporter Bcr no data 29 80
  Azospirillum sp. SherDot2 MPMX19_00435 Bicyclomycin resistance protein insig. 28 93
  Erwinia amylovora T8 OLJFJH_11715 Bcr/CflA family multidrug efflux MFS transporter insig. 30 86
  Escherichia coli BL21 ECD_02112 bicyclomycin/cysteine/sulfonamide efflux transporter insig. 29 80
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01527 Bicyclomycin resistance protein insig. 29 80
  Escherichia coli BW25113 b2182 bcr bicyclomycin/multidrug efflux system (NCBI) strong 29 80
  Pseudomonas syringae pv. syringae B728a Psyr_0657 Drug resistance transporter Bcr/CflA subfamily sig. 30 94
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0657 Drug resistance transporter Bcr/CflA subfamily insig. 30 94
  Variovorax sp. OAS795 ABID97_RS10530 multidrug effflux MFS transporter insig. 30 95
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3754 MFS family multidrug transport protein, bicyclomycin resistance protein insig. 30 82
  Escherichia coli ECOR27 NOLOHH_14940 bcr multidrug efflux MFS transporter Bcr insig. 29 80
  Escherichia coli ECRC62 BNILDI_13860 bcr multidrug efflux MFS transporter Bcr cofit 29 80
  Escherichia fergusonii Becca EFB2_01674 Bicyclomycin resistance protein insig. 29 80
  Escherichia coli Nissle 1917 ECOLIN_RS12755 multidrug efflux MFS transporter Bcr insig. 29 80
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00850 Bicyclomycin resistance protein cofit 29 95
  Pseudomonas fluorescens SBW25 PFLU_RS03255 multidrug effflux MFS transporter insig. 28 95
  Pseudomonas fluorescens SBW25-INTG PFLU_RS03255 multidrug effflux MFS transporter insig. 28 95
  Pseudomonas simiae WCS417 PS417_03175 major facilitator transporter insig. 28 95
  Pseudomonas orientalis W4I3 QF045_RS17790 multidrug effflux MFS transporter cofit 28 95
  Klebsiella pneumoniae MKP103 KDGMDA_26745 Bcr/CflA family multidrug efflux MFS transporter insig. 29 87
  Pseudomonas fluorescens SBW25 PFLU_RS17770 multidrug effflux MFS transporter insig. 28 84
  Pseudomonas fluorescens SBW25-INTG PFLU_RS17770 multidrug effflux MFS transporter insig. 28 84
  Enterobacter sp. TBS_079 MPMX20_03148 Bicyclomycin resistance protein insig. 30 85