Homologs of ybiH from Escherichia coli BW25113

ybiH: putative transcriptional regulator (VIMSS)
SEED: Transcriptional regulator YbiH, TetR family

104 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
o Escherichia coli BL21 ECD_00763 DUF1956 domain-containing tetR family putative transcriptional regulator insig. 100 100
o Escherichia coli ECOR27 NOLOHH_22650 cecR DNA-binding transcriptional regulator CecR insig. 100 100
o Escherichia coli ECOR38 HEPCGN_01745 cecR DNA-binding transcriptional regulator CecR insig. 100 100
o Escherichia coli ECRC101 MCAODC_25510 cecR DNA-binding transcriptional regulator CecR insig. 100 100
o Escherichia coli ECRC102 NIAGMN_04340 cecR DNA-binding transcriptional regulator CecR insig. 100 100
o Escherichia coli ECRC62 BNILDI_20930 cecR DNA-binding transcriptional regulator CecR insig. 100 100
o Escherichia coli ECRC98 JDDGAC_09930 cecR DNA-binding transcriptional regulator CecR insig. 100 100
o Escherichia coli ECRC99 KEDOAH_21615 cecR DNA-binding transcriptional regulator CecR no data 100 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02917 HTH-type transcriptional dual regulator CecR insig. 100 100
  Escherichia coli BW25113 b0796 ybiH putative transcriptional regulator (VIMSS) sig. 100 100
o Escherichia coli ECRC100 OKFHMN_06295 cecR DNA-binding transcriptional regulator CecR insig. 100 100
o Escherichia fergusonii Becca EFB2_03309 HTH-type transcriptional dual regulator CecR insig. 99 100
o Escherichia coli Nissle 1917 ECOLIN_RS04240 DNA-binding transcriptional regulator CecR insig. 99 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF695 Transcriptional regulator YbiH, TetR family insig. 85 100
o Klebsiella pneumoniae MKP103 KDGMDA_17150 transcriptional regulator CecR insig. 80 98
o Enterobacter sp. TBS_079 MPMX20_01424 HTH-type transcriptional dual regulator CecR insig. 78 100
o Klebsiella pneumoniae MRSN742743 GJGHJB_03426 cecR transcriptional regulator CecR insig. 80 98
o Enterobacter asburiae PDN3 EX28DRAFT_2195 transcriptional regulator, TetR family insig. 77 100
o Klebsiella michiganensis M5al BWI76_RS08885 transcriptional regulator sig. 73 100
o Rahnella sp. WP5 EX31_RS00885 transcriptional regulator CecR insig. 63 98
o Serratia liquefaciens MT49 IAI46_06615 transcriptional regulator CecR insig. 53 99
  Dechlorosoma suillum PS Dsui_0270 transcriptional regulator insig. 34 87
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2559 transcriptional regulator, TetR family insig. 32 91
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2560 transcriptional regulator, TetR family insig. 32 97
  Sinorhizobium meliloti 1021 SM_b21208 TetR family transcriptional regulator insig. 29 91
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04939 transcriptional regulator, TetR family strong 29 98
  Paraburkholderia sabiae LMG 24235 QEN71_RS07900 CerR family C-terminal domain-containing protein insig. 29 86
  Rhodopseudomonas palustris CGA009 TX73_015395 CerR family C-terminal domain-containing protein insig. 27 92
  Variovorax sp. SCN45 GFF4398 Transcriptional regulator, AcrR family strong 29 93
  Rhodospirillum rubrum S1H Rru_A1794 Transcriptional Regulator, TetR family (NCBI) insig. 32 83
  Desulfovibrio vulgaris Hildenborough JW710 DVU0057 transcriptional regulator, TetR family (TIGR) strong 27 87
  Desulfovibrio vulgaris Miyazaki F DvMF_2165 transcriptional regulator, TetR family (RefSeq) strong 29 93
  Variovorax sp. SCN45 GFF519 Transcriptional regulator, AcrR family insig. 31 81
  Acidovorax sp. GW101-3H11 Ac3H11_1210 transcriptional regulator, TetR family sig. 30 75
  Paraburkholderia sabiae LMG 24235 QEN71_RS37145 TetR family transcriptional regulator strong 29 58
  Desulfovibrio vulgaris Miyazaki F DvMF_2158 transcriptional regulator, TetR family (RefSeq) strong 31 66
  Cupriavidus basilensis FW507-4G11 RR42_RS30185 TetR family transcriptional regulator strong 39 33
  Pseudomonas aeruginosa PUPa3 NPBIFN_03763 HTH tetR-type domain-containing protein strong 30 59
  Pseudomonas aeruginosa MRSN321 PFGADD_03722 HTH tetR-type domain-containing protein sig. 30 59
  Pseudomonas aeruginosa PA14 IKLFDK_07165 TetR family transcriptional regulator sig. 30 59
  Enterobacter sp. TBS_079 MPMX20_01700 HTH-type transcriptional regulator RutR strong 27 61
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_07185 TetR family transcriptional regulator strong 42 26
  Vibrio cholerae E7946 ATCC 55056 CSW01_08745 TetR/AcrR family transcriptional regulator insig. 32 43
  Rhodopseudomonas palustris CGA009 TX73_021190 TetR family transcriptional regulator insig. 32 63
  Escherichia coli ECOR38 HEPCGN_23530 rutR HTH-type transcriptional regulator RutR insig. 29 61
  Pseudomonas protegens RBAN4 FABNJH_14540 pltZ PltZ insig. 29 75
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS07645 TetR family transcriptional regulator cofit 38 30
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2284 transcriptional regulator, TetR family insig. 37 32
  Variovorax sp. OAS795 ABID97_RS17705 CerR family C-terminal domain-containing protein insig. 31 64
  Rahnella sp. WP5 EX31_RS24095 HTH-type transcriptional regulator RutR insig. 27 55
  Enterobacter asburiae PDN3 EX28DRAFT_1913 transcriptional regulator, TetR family insig. 25 61
  Desulfovibrio vulgaris Hildenborough JW710 DVU0436 transcriptional regulator, TetR family (TIGR) strong 25 74
  Mycobacterium tuberculosis H37Rv Rv1219c Probable transcriptional regulatory protein insig. 43 25
  Variovorax sp. OAS795 ABID97_RS11095 TetR/AcrR family transcriptional regulator strong 35 40
  Escherichia coli BL21 ECD_01016 rut operon transcriptional repressor for no data 30 55
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02653 HTH-type transcriptional regulator RutR cofit 30 55
  Escherichia coli ECRC100 OKFHMN_04610 rutR HTH-type transcriptional regulator RutR insig. 28 93
  Escherichia coli ECRC101 MCAODC_23995 rutR HTH-type transcriptional regulator RutR insig. 28 93
  Escherichia coli ECRC102 NIAGMN_23725 rutR HTH-type transcriptional regulator RutR no data 28 93
  Escherichia coli ECRC98 JDDGAC_08220 rutR HTH-type transcriptional regulator RutR insig. 28 93
  Escherichia coli ECRC99 KEDOAH_23135 rutR HTH-type transcriptional regulator RutR no data 28 93
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3299 Transcriptional regulator RutR of pyrimidine catabolism (TetR family) insig. 28 56
  Klebsiella michiganensis M5al BWI76_RS10785 transcriptional regulator strong 28 55
  Marinobacter adhaerens HP15 HP15_3627 transcriptional regulator, TetR family strong 32 36
  Escherichia fergusonii Becca EFB2_03067 HTH-type transcriptional regulator RutR insig. 30 55
  Escherichia coli ECOR27 NOLOHH_21510 rutR HTH-type transcriptional regulator RutR insig. 30 55
  Escherichia coli ECRC62 BNILDI_19675 rutR HTH-type transcriptional regulator RutR insig. 30 55
  Escherichia coli Nissle 1917 ECOLIN_RS05285 HTH-type transcriptional regulator RutR no data 30 55
  Escherichia coli BW25113 b1013 ycdC predicted DNA-binding transcriptional regulator (NCBI) sig. 30 55
  Mycobacterium tuberculosis H37Rv Rv0775 Conserved hypothetical protein insig. 34 38
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS21330 TetR family transcriptional regulator strong 41 28
  Pantoea sp. MT58 IAI47_07270 TetR family transcriptional regulator insig. 38 30
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS20990 TetR/AcrR family transcriptional regulator strong 44 22
  Sphingobium sp. HT1-2 GFF1387 Transcriptional regulator, AcrR family insig. 53 22
  Erwinia amylovora T8 OLJFJH_15830 HTH-type transcriptional regulator RutR insig. 34 39
  Azospirillum brasilense Sp245 AZOBR_RS05685 TetR family transcriptional regulator insig. 33 41
  Variovorax sp. SCN45 GFF4821 Transcriptional regulator, AcrR family cofit 31 44
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4285 Transcriptional regulator, TetR family insig. 36 35
  Serratia liquefaciens MT49 IAI46_09055 HTH-type transcriptional regulator RutR insig. 25 61
  Pseudomonas orientalis W4I3 QF045_RS11520 TetR/AcrR family transcriptional regulator insig. 35 35
  Rahnella sp. WP5 EX31_RS07030 TetR family transcriptional regulator insig. 34 40
  Enterobacter sp. TBS_079 MPMX20_00655 HTH-type transcriptional repressor NicS insig. 32 30
  Azospirillum sp. SherDot2 MPMX19_02996 HTH-type transcriptional repressor NicS insig. 40 24
  Variovorax sp. OAS795 ABID97_RS24825 TetR/AcrR family transcriptional regulator insig. 34 35
  Enterobacter asburiae PDN3 EX28DRAFT_3565 transcriptional regulator, TetR family insig. 37 24
  Caulobacter crescentus NA1000 CCNA_00337 TetR-family transcriptional regulator strong 43 24
  Caulobacter crescentus NA1000 Δfur CCNA_00337 TetR-family transcriptional regulator insig. 43 24
  Desulfovibrio vulgaris Miyazaki F DvMF_1517 transcriptional regulator, TetR family (RefSeq) strong 42 22
  Paraburkholderia sabiae LMG 24235 QEN71_RS22950 TetR/AcrR family transcriptional regulator insig. 39 27
  Variovorax sp. OAS795 ABID97_RS10430 CerR family C-terminal domain-containing protein insig. 37 24
  Lysobacter sp. OAE881 ABIE51_RS09405 TetR family transcriptional regulator insig. 41 20
  Desulfovibrio vulgaris Hildenborough JW710 DVU1690 transcriptional regulator, TetR family (TIGR) sig. 39 25
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2739.1 Predicted transcriptional regulator for fatty acid degradation FadQ, TetR family sig. 43 20
  Rhodanobacter sp. FW510-T8 OKGIIK_07150 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA insig. 43 20
  Rhodanobacter sp. FW510-T8 OKGIIK_02970 TetR family transcriptional regulator insig. 47 22
  Desulfovibrio vulgaris Miyazaki F DvMF_0336 transcriptional regulator, TetR family (RefSeq) strong 38 26
  Enterobacter sp. TBS_079 MPMX20_01484 HTH-type transcriptional regulator RcdA sig. 32 29
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00295 transcriptional regulator, TetR family insig. 35 28
  Paraburkholderia graminis OAS925 ABIE53_001425 AcrR family transcriptional regulator strong 34 29
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS05465 TetR/AcrR family transcriptional regulator strong 41 20
  Burkholderia phytofirmans PsJN BPHYT_RS06090 TetR family transcriptional regulator insig. 34 29
  Pseudomonas aeruginosa MRSN321 PFGADD_01962 psrA transcriptional regulator PsrA strong 33 38
  Pseudomonas aeruginosa PA14 IKLFDK_15295 transcriptional regulator PsrA strong 33 38
  Cupriavidus basilensis FW507-4G11 RR42_RS12505 TetR family transcriptional regulator sig. 25 52