Homologs of Rru_A3494 from Rhodospirillum rubrum S1H

Putative diguanylate phosphodiesterase (EAL domain) with Response Regulator Receiver modulation (NCBI)
SEED: Sensory box/GGDEF family protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Rhodospirillum rubrum S1H Rru_A3494 Putative diguanylate phosphodiesterase (EAL domain) with Response Regulator Receiver modulation (NCBI) insig. 100 100
o Magnetospirillum magneticum AMB-1 AMB_RS10945 diguanylate phosphodiesterase insig. 37 95
o Rhodopseudomonas palustris CGA009 TX73_008635 EAL domain-containing response regulator insig. 39 93
o Herbaspirillum seropedicae SmR1 HSERO_RS03135 diguanylate cyclase sig. 37 84
o Alteromonas macleodii MIT1002 MIT1002_04215 Bacteriophytochrome cph2 insig. 38 95
  Magnetospirillum magneticum AMB-1 AMB_RS16740 diguanylate phosphodiesterase insig. 37 94
  Pseudomonas sp. S08-1 OH686_03800 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 46 61
  Paraburkholderia sabiae LMG 24235 QEN71_RS10745 EAL domain-containing protein insig. 46 62
  Pseudomonas fluorescens SBW25 PFLU_RS05370 EAL domain-containing protein insig. 44 60
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05370 EAL domain-containing protein insig. 44 60
  Variovorax sp. SCN45 GFF3184 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 45 63
  Pseudomonas orientalis W4I3 QF045_RS17095 EAL domain-containing protein insig. 45 62
o Pseudomonas sp. SVBP6 COO64_RS26085 EAL domain-containing protein insig. 34 97
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_467 Sensory box/GGDEF family protein insig. 45 62
  Dechlorosoma suillum PS Dsui_0894 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 48 63
  Pseudomonas fluorescens SBW25 PFLU_RS13445 bifunctional diguanylate cyclase/phosphodiesterase insig. 43 65
  Pseudomonas fluorescens SBW25-INTG PFLU_RS13445 bifunctional diguanylate cyclase/phosphodiesterase insig. 43 65
  Pseudomonas fluorescens FW300-N2C3 AO356_22925 histidine kinase insig. 44 62
  Pseudomonas aeruginosa MRSN321 DY961_RS20305 bifunctional diguanylate cyclase/phosphodiesterase insig. 44 63
  Pseudomonas aeruginosa PUPa3 DQ20_RS54400 bifunctional diguanylate cyclase/phosphodiesterase cofit 44 63
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02800 putative signaling protein cofit 46 60
  Pseudomonas sp. RS175 PFR28_02457 putative signaling protein insig. 44 62
  Pseudomonas segetis P6 ACVTMO_RS15975 putative bifunctional diguanylate cyclase/phosphodiesterase sig. 44 63
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4670 Sensory box/GGDEF family protein insig. 44 62
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1972.1 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 44 62
  Pseudomonas simiae WCS417 PS417_12760 histidine kinase insig. 42 65
  Acidovorax sp. GW101-3H11 Ac3H11_4640 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) cofit 47 62
  Pseudomonas sp. RS175 PFR28_01497 Sensor histidine kinase RcsC insig. 33 98
  Pseudomonas syringae pv. syringae B728a Psyr_2486 diguanylate cyclase/phosphodiesterase insig. 43 62
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2486 diguanylate cyclase/phosphodiesterase insig. 43 62
  Pseudomonas aeruginosa PA14 IKLFDK_08335 Uncharacterized signaling protein PA1727 sig. 44 63
  Herbaspirillum seropedicae SmR1 HSERO_RS13550 diguanylate phosphodiesterase insig. 43 63
  Pseudomonas sp. DMC3 GFF3504 putative signaling protein cofit 44 62
o Pseudomonas fluorescens FW300-N2E3 AO353_18200 diguanylate phosphodiesterase insig. 33 98
  Pseudomonas sp. SVBP6 COO64_RS14580 bifunctional diguanylate cyclase/phosphodiesterase insig. 44 63
  Herbaspirillum seropedicae SmR1 HSERO_RS13620 diguanylate cyclase strong 43 63
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1770.1 hypothetical protein insig. 34 85
  Paraburkholderia sabiae LMG 24235 QEN71_RS02090 EAL domain-containing protein insig. 43 60
  Dechlorosoma suillum PS Dsui_2365 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 42 66
  Dechlorosoma suillum PS Dsui_0506 diguanylate cyclase (GGDEF) domain-containing protein cofit 43 63
  Dechlorosoma suillum PS Dsui_1011 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 41 65
  Pseudomonas aeruginosa PA14 IKLFDK_00990 diguanylate phosphodiesterase insig. 33 96
  Pseudomonas putida KT2440 PP_3581 conserved membrane protein of unknown function insig. 44 62
  Pantoea sp. MT58 IAI47_03280 EAL domain-containing protein insig. 44 61
  Pseudomonas fluorescens FW300-N2E3 AO353_22910 histidine kinase insig. 43 62
  Acidovorax sp. GW101-3H11 Ac3H11_2715 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 42 62
  Dechlorosoma suillum PS Dsui_0262 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 43 60
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS16415 EAL domain-containing protein cofit 43 66
  Methylophilus sp. DMC18 GFF247 hypothetical protein insig. 43 60
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3263 Sensory box/GGDEF family protein insig. 42 65
  Marinobacter adhaerens HP15 HP15_1415 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) insig. 44 61
  Shewanella sp. ANA-3 Shewana3_3829 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) cofit 42 63
  Dechlorosoma suillum PS Dsui_1890 diguanylate cyclase (GGDEF) domain-containing protein insig. 42 65
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_790 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 40 67
  Pseudomonas orientalis W4I3 QF045_RS16400 EAL domain-containing response regulator insig. 35 92
  Pseudomonas simiae WCS417 PS417_16935 diguanylate phosphodiesterase insig. 33 97
  Ralstonia sp. UNC404CL21Col ABZR87_RS07670 bifunctional diguanylate cyclase/phosphodiesterase insig. 46 60
  Herbaspirillum seropedicae SmR1 HSERO_RS18020 diguanylate cyclase insig. 44 63
  Dechlorosoma suillum PS Dsui_1531 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 43 64
  Cupriavidus basilensis FW507-4G11 RR42_RS09980 diguanylate phosphodiesterase insig. 45 61
  Shewanella oneidensis MR-1 SO0341 sensory box protein (NCBI ptt file) insig. 42 63
  Ralstonia solanacearum GMI1000 RS_RS02540 bifunctional diguanylate cyclase/phosphodiesterase insig. 46 58
  Pseudomonas fluorescens SBW25 PFLU_RS05360 GGDEF and EAL domain-containing protein insig. 43 59
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05360 GGDEF and EAL domain-containing protein insig. 43 59
  Pseudomonas segetis P6 ACVTMO_RS16300 putative bifunctional diguanylate cyclase/phosphodiesterase insig. 46 60
  Acidovorax sp. GW101-3H11 Ac3H11_448 Sensory box/GGDEF family protein insig. 42 61
  Pseudomonas fluorescens FW300-N2C3 AO356_17705 diguanylate cyclase insig. 37 70
  Synechocystis sp000284455 PCC 6803 SGL_RS17625 EAL domain-containing protein strong 33 94
  Pseudomonas sp. S08-1 OH686_19830 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 44 64
  Marinobacter adhaerens HP15 HP15_3533 response regulator receiver (CheY-like) modulated diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 43 61
  Rhodospirillum rubrum S1H Rru_A3560 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) insig. 42 64
  Magnetospirillum magneticum AMB-1 AMB_RS23225 GGDEF domain-containing protein insig. 45 60
  Pseudomonas simiae WCS417 PS417_05435 diguanylate cyclase insig. 40 62
  Methylophilus sp. DMC18 GFF1835 Regulator of RpoS cofit 32 93
  Pseudomonas sp. RS175 PFR28_03484 hypothetical protein strong 38 69
  Ralstonia solanacearum PSI07 RPSI07_RS21500 bifunctional diguanylate cyclase/phosphodiesterase insig. 46 58
  Pseudomonas syringae pv. syringae B728a Psyr_3942 diguanylate cyclase/phosphodiesterase insig. 42 61
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3942 diguanylate cyclase/phosphodiesterase insig. 42 61
  Pseudomonas fluorescens FW300-N2C3 AO356_26670 histidine kinase insig. 42 64
  Kangiella aquimarina DSM 16071 B158DRAFT_0509 diguanylate cyclase (GGDEF) domain strong 41 60
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04630 PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein insig. 44 57
  Acidovorax sp. GW101-3H11 Ac3H11_446 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) strong 43 62
  Rhodospirillum rubrum S1H Rru_A0990 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) (NCBI) insig. 41 71
  Pseudomonas fluorescens SBW25 PFLU_RS15265 EAL domain-containing response regulator insig. 34 93
  Pseudomonas fluorescens SBW25-INTG PFLU_RS15265 EAL domain-containing response regulator insig. 34 93
  Pseudomonas sp. BP01 JOY50_RS07335 bifunctional diguanylate cyclase/phosphodiesterase insig. 44 61
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5465 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 37 70
  Herbaspirillum seropedicae SmR1 HSERO_RS10675 diguanylate cyclase strong 44 63
  Burkholderia phytofirmans PsJN BPHYT_RS03250 diguanylate cyclase insig. 42 60
  Pseudomonas sp. SVBP6 COO64_RS12500 dibA phosphodiesterase DibA cofit 44 61
  Dechlorosoma suillum PS Dsui_3334 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 42 64
  Desulfovibrio vulgaris Miyazaki F DvMF_2963 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) insig. 42 62
  Magnetospirillum magneticum AMB-1 AMB_RS11515 DUF3365 domain-containing protein insig. 43 65
  Shewanella sp. ANA-3 Shewana3_1464 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) cofit 41 63
  Shewanella amazonensis SB2B Sama_3115 putative diguanylate phosphodiesterase (RefSeq) insig. 40 61
  Herbaspirillum seropedicae SmR1 HSERO_RS16570 membrane protein insig. 43 63
  Sinorhizobium meliloti 1021 SMc00038 hypothetical protein insig. 42 63
  Magnetospirillum magneticum AMB-1 AMB_RS23535 PAS domain S-box protein cofit 41 63
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03092 Protein-glutamate methylesterase/protein-glutamine glutaminase cofit 32 95
  Acidovorax sp. GW101-3H11 Ac3H11_4486 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 44 62