Conservation of cofitness between Xcc-8004.5365.1 and Xcc-8004.5366.1 in Xanthomonas campestris pv. campestris strain 8004

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.5365.1 Uncharacterized ABC transporter, permease component YrbE 1.0 Xcc-8004.5366.1 Uncharacterized ABC transporter, periplasmic component YrbD 0.76 1
Lysobacter sp. OAE881 0.78 ABIE51_RS01010 MlaE family lipid ABC transporter permease subunit 0.54 ABIE51_RS01005 outer membrane lipid asymmetry maintenance protein MlaD 0.96 1
Pantoea sp. MT58 0.48 IAI47_17140 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.25 IAI47_17135 outer membrane lipid asymmetry maintenance protein MlaD 0.58 4
Acidovorax sp. GW101-3H11 0.47 Ac3H11_4713 Uncharacterized ABC transporter, permease component YrbE 0.30 Ac3H11_4714 Uncharacterized ABC transporter, periplasmic component YrbD 0.94 4
Escherichia coli HS(pFamp)R (ATCC 700891) 0.47 OHPLBJKB_00506 putative phospholipid ABC transporter permease protein MlaE 0.29 OHPLBJKB_00507 putative phospholipid ABC transporter-binding protein MlaD 0.79 4
Escherichia coli Nissle 1917 0.47 ECOLIN_RS18385 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.29 ECOLIN_RS18380 outer membrane lipid asymmetry maintenance protein MlaD 0.92 1
Escherichia coli ECRC102 0.47 NIAGMN_15740 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.29 NIAGMN_15745 mlaD outer membrane lipid asymmetry maintenance protein MlaD — —
Escherichia coli ECRC101 0.47 MCAODC_08500 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.29 MCAODC_08505 mlaD outer membrane lipid asymmetry maintenance protein MlaD 0.97 1
Escherichia coli ECRC100 0.47 OKFHMN_17980 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.29 OKFHMN_17985 mlaD outer membrane lipid asymmetry maintenance protein MlaD 0.95 6
Escherichia coli ECRC99 0.47 KEDOAH_10170 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.29 KEDOAH_10165 mlaD outer membrane lipid asymmetry maintenance protein MlaD — —
Escherichia coli ECOR27 0.47 NOLOHH_09780 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.29 NOLOHH_09785 mlaD outer membrane lipid asymmetry maintenance protein MlaD 0.87 5
Escherichia coli ECRC98 0.47 JDDGAC_21605 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.29 JDDGAC_21610 mlaD outer membrane lipid asymmetry maintenance protein MlaD 0.99 1
Dickeya dianthicola ME23 0.47 DZA65_RS01550 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.30 DZA65_RS01555 outer membrane lipid asymmetry maintenance protein MlaD 0.92 2
Dickeya dianthicola 67-19 0.47 HGI48_RS01485 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.30 HGI48_RS01490 outer membrane lipid asymmetry maintenance protein MlaD 0.61 3
Escherichia fergusonii Becca 0.47 EFB2_00629 Intermembrane phospholipid transport system permease protein MlaE 0.29 EFB2_00630 Intermembrane phospholipid transport system binding protein MlaD 0.64 45
Escherichia coli BL21 0.47 ECD_03059 ABC transporter maintaining OM lipid asymmetry, inner membrane permease protein 0.29 ECD_03058 OM lipid asymmetry maintenance protein; membrane-anchored ABC family periplasmic binding protein 0.79 3
Escherichia coli ECOR38 0.47 HEPCGN_16855 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.29 HEPCGN_16860 mlaD outer membrane lipid asymmetry maintenance protein MlaD 0.97 1
Escherichia coli ECRC62 0.47 BNILDI_01755 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.29 BNILDI_01750 mlaD outer membrane lipid asymmetry maintenance protein MlaD low > 75
Escherichia coli BW25113 0.47 b3194 yrbE predicted toluene transporter subunit: membrane component of ABC superfamily (NCBI) 0.29 b3193 yrbD predicted ABC-type organic solvent transporter (NCBI) 0.93 2
Enterobacter sp. TBS_079 0.47 MPMX20_04100 Intermembrane phospholipid transport system permease protein MlaE 0.27 MPMX20_04099 Intermembrane phospholipid transport system binding protein MlaD 0.36 74
Vibrio cholerae E7946 ATCC 55056 0.46 CSW01_12770 ABC transporter permease 0.26 CSW01_12765 outer membrane lipid asymmetry maintenance protein MlaD 0.64 13
Enterobacter asburiae PDN3 0.46 EX28DRAFT_3248 ABC transport permease subunit 0.26 EX28DRAFT_3247 mce related protein low > 76
Variovorax sp. OAS795 0.46 ABID97_RS23210 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.32 ABID97_RS23205 outer membrane lipid asymmetry maintenance protein MlaD 0.81 3
Serratia liquefaciens MT49 0.46 IAI46_22425 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.30 IAI46_22420 outer membrane lipid asymmetry maintenance protein MlaD low > 86
Rahnella sp. WP5 0.45 EX31_RS12440 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.27 EX31_RS12445 outer membrane lipid asymmetry maintenance protein MlaD low > 89
Pectobacterium carotovorum WPP14 0.45 HER17_RS20020 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.30 HER17_RS20015 outer membrane lipid asymmetry maintenance protein MlaD 0.61 20
Dickeya dadantii 3937 0.45 DDA3937_RS01570 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.31 DDA3937_RS01575 outer membrane lipid asymmetry maintenance protein MlaD 0.69 3
Cupriavidus basilensis FW507-4G11 0.45 RR42_RS18965 ABC transporter permease 0.34 RR42_RS18960 ABC transporter substrate-binding protein 0.99 1
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_05642 phospholipid/cholesterol/gamma-HCH transport system permease protein 0.36 H281DRAFT_05643 phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein 0.91 1
Dechlorosoma suillum PS 0.45 Dsui_1399 conserved hypothetical integral membrane protein 0.34 Dsui_1400 ABC-type transport system involved in resistance to organic solvents, periplasmic component 0.96 1
Paraburkholderia graminis OAS925 0.45 ABIE53_003711 phospholipid/cholesterol/gamma-HCH transport system permease protein 0.35 ABIE53_003710 phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein 0.96 1
Shewanella loihica PV-4 0.44 Shew_3303 hypothetical protein (RefSeq) 0.28 Shew_3302 hypothetical protein (RefSeq) 0.66 4
Acinetobacter radioresistens SK82 0.44 MPMX26_02740 Intermembrane phospholipid transport system permease protein MlaE 0.22 MPMX26_02739 Intermembrane phospholipid transport system binding protein MlaD 0.98 2
Ralstonia sp. UNC404CL21Col 0.44 ABZR87_RS02550 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.32 ABZR87_RS02545 outer membrane lipid asymmetry maintenance protein MlaD 0.95 1
Shewanella oneidensis MR-1 0.44 SO3953 conserved hypothetical protein TIGR00056 (NCBI ptt file) 0.29 SO3952 mce-related protein (NCBI ptt file) 0.94 1
Ralstonia solanacearum IBSBF1503 0.44 RALBFv3_RS06895 ABC transporter permease 0.33 RALBFv3_RS06890 outer membrane lipid asymmetry maintenance protein MlaD — —
Ralstonia solanacearum UW163 0.44 UW163_RS06720 ABC transporter permease 0.33 UW163_RS06725 outer membrane lipid asymmetry maintenance protein MlaD — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF1324 Uncharacterized ABC transporter, permease component YrbE 0.30 GFF1323 Uncharacterized ABC transporter, periplasmic component YrbD 0.89 1
Shewanella sp. ANA-3 0.43 Shewana3_0679 hypothetical protein (RefSeq) 0.28 Shewana3_0680 hypothetical protein (RefSeq) 0.89 3
Ralstonia solanacearum GMI1000 0.43 RS_RS14840 ABC transporter permease 0.33 RS_RS14835 outer membrane lipid asymmetry maintenance protein MlaD 0.97 1
Ralstonia solanacearum PSI07 0.43 RPSI07_RS10340 ABC transporter permease 0.33 RPSI07_RS10345 outer membrane lipid asymmetry maintenance protein MlaD 0.64 5
Marinobacter adhaerens HP15 0.43 HP15_2435 ABC-type transport system involved in resistance to organic solvents, permease component 0.27 HP15_2434 mammalian cell entry related domain protein 0.82 3
Alteromonas macleodii MIT1002 0.43 MIT1002_00835 putative phospholipid ABC transporter permease protein MlaE 0.30 MIT1002_00836 putative phospholipid ABC transporter-binding protein MlaD 0.64 2
Shewanella amazonensis SB2B 0.43 Sama_3080 hypothetical protein (RefSeq) 0.30 Sama_3079 mce-related protein (RefSeq) 0.90 4
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS27915 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.35 QEN71_RS27910 outer membrane lipid asymmetry maintenance protein MlaD 0.75 3
Castellaniella sp019104865 MT123 0.41 ABCV34_RS11185 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.34 ABCV34_RS11190 outer membrane lipid asymmetry maintenance protein MlaD — —
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS20395 ABC transporter permease 0.35 HSERO_RS20390 ABC transporter substrate-binding protein — —
Desulfovibrio vulgaris Miyazaki F 0.34 DvMF_0852 protein of unknown function DUF140 (RefSeq) 0.25 DvMF_0854 Mammalian cell entry related domain protein (RefSeq) 0.80 1
Caulobacter crescentus NA1000 0.29 CCNA_03809 organic solvent resistance transport system permease 0.28 CCNA_03808 organic solvent resistance transport system Ttg2C protein 0.84 4
Caulobacter crescentus NA1000 Δfur 0.29 CCNA_03809 organic solvent resistance transport system permease 0.28 CCNA_03808 organic solvent resistance transport system Ttg2C protein low > 67
Azospirillum brasilense Sp245 0.28 AZOBR_RS08345 ABC transporter permease 0.25 AZOBR_RS11990 ATPase AAA 0.80 4
Rhodospirillum rubrum S1H 0.27 Rru_A0408 Protein of unknown function DUF140 (NCBI) 0.19 Rru_A2438 Mammalian cell entry related (NCBI) — —
Dinoroseobacter shibae DFL-12 0.23 Dshi_2379 protein of unknown function DUF140 (RefSeq) 0.18 Dshi_1391 Mammalian cell entry related domain protein (RefSeq) 0.81 4

Not shown: 31 genomes with orthologs for Xcc-8004.5365.1 only; 0 genomes with orthologs for Xcc-8004.5366.1 only