| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Xanthomonas campestris pv. campestris strain 8004 | 1.0 | Xcc-8004.3041.1 | | Dna binding response regulator PrrA (RegA) | 1.0 | Xcc-8004.2182.1 | | NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form | 0.71 | 6 |
| Rhodanobacter sp. FW510-T8 | 0.46 | OKGIIK_10900 | | two-component system response regulator | 0.54 | OKGIIK_09160 | gdh2 | NAD-specific glutamate dehydrogenase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.46 | QEN71_RS00325 | | response regulator transcription factor | 0.39 | QEN71_RS20065 | | NAD-glutamate dehydrogenase | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.46 | ABZR86_RS10115 | | response regulator transcription factor | 0.55 | ABZR86_RS07560 | | NAD-glutamate dehydrogenase domain-containing protein | — | — |
| Rhodanobacter denitrificans MT42 | 0.46 | LRK55_RS03810 | | response regulator transcription factor | 0.54 | LRK55_RS01865 | | NAD-glutamate dehydrogenase | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.46 | LRK54_RS04040 | | response regulator transcription factor | 0.54 | LRK54_RS02090 | | NAD-glutamate dehydrogenase | — | — |
| Burkholderia phytofirmans PsJN | 0.45 | BPHYT_RS01625 | | chemotaxis protein CheY | 0.39 | BPHYT_RS22475 | | NAD-glutamate dehydrogenase | low | > 109 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.45 | H281DRAFT_02208 | | two component transcriptional regulator, Fis family | 0.39 | H281DRAFT_03183 | | glutamate dehydrogenase (NAD) | — | — |
| Paraburkholderia graminis OAS925 | 0.45 | ABIE53_000420 | | two-component system response regulator RegA | 0.39 | ABIE53_004113 | | glutamate dehydrogenase | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.44 | PfGW456L13_5048 | | Dna binding response regulator PrrA (RegA) | 0.39 | PfGW456L13_3298 | | NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form | low | > 87 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.42 | Psyr_4230 | | Helix-turn-helix, Fis-type | 0.38 | Psyr_1724 | | glutamate dehydrogenase (NAD) | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.42 | Psyr_4230 | | Helix-turn-helix, Fis-type | 0.38 | Psyr_1724 | | glutamate dehydrogenase (NAD) | low | > 86 |
| Ralstonia solanacearum IBSBF1503 | 0.42 | RALBFv3_RS09615 | | DNA-binding response regulator | 0.40 | RALBFv3_RS20390 | | NAD-glutamate dehydrogenase | low | > 76 |
| Pseudomonas fluorescens FW300-N2E3 | 0.42 | AO353_05335 | | chemotaxis protein CheY | 0.38 | AO353_22820 | | NAD-glutamate dehydrogenase | — | — |
| Ralstonia solanacearum UW163 | 0.42 | UW163_RS03965 | | DNA-binding response regulator | 0.40 | UW163_RS18785 | | NAD-glutamate dehydrogenase | — | — |
| Pseudomonas putida KT2440 | 0.41 | PP_0888 | | Photosynthetic apparatus regulatory protein RegA | 0.39 | PP_2080 | | NAD-specific glutamate dehydrogenase | low | > 96 |
| Pseudomonas fluorescens FW300-N1B4 | 0.41 | Pf1N1B4_1115 | | Dna binding response regulator PrrA (RegA) | 0.38 | Pf1N1B4_4643 | | NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form | low | > 87 |
| Ralstonia sp. UNC404CL21Col | 0.41 | ABZR87_RS05135 | | response regulator transcription factor | 0.40 | ABZR87_RS22605 | | NAD-glutamate dehydrogenase | — | — |
| Shewanella oneidensis MR-1 | 0.41 | SO4172 | | DNA-binding response regulator (NCBI ptt file) | 0.40 | SO2593 | | conserved hypothetical protein (NCBI ptt file) | low | > 76 |
| Pseudomonas fluorescens SBW25 | 0.41 | PFLU_RS04140 | | response regulator transcription factor | 0.38 | PFLU_RS17095 | | NAD-glutamate dehydrogenase | low | > 109 |
| Pseudomonas fluorescens FW300-N2C3 | 0.41 | AO356_07205 | | chemotaxis protein CheY | 0.38 | AO356_24705 | | NAD-glutamate dehydrogenase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.41 | Pf6N2E2_3302 | | Dna binding response regulator PrrA (RegA) | 0.38 | Pf6N2E2_634 | | NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form | — | — |
| Ralstonia solanacearum PSI07 | 0.41 | RPSI07_RS23750 | | DNA-binding response regulator | 0.39 | RPSI07_RS18780 | | NAD-glutamate dehydrogenase | low | > 81 |
| Pseudomonas sp. RS175 | 0.41 | PFR28_00137 | | Photosynthetic apparatus regulatory protein RegA | 0.38 | PFR28_01602 | | NAD-specific glutamate dehydrogenase | — | — |
| Pseudomonas sp. S08-1 | 0.41 | OH686_08680 | | Dna binding response regulator PrrA (RegA) | 0.39 | OH686_22265 | | NAD-specific glutamate dehydrogenase , large form | low | > 80 |
| Shewanella sp. ANA-3 | 0.41 | Shewana3_3707 | | response regulator receiver protein (RefSeq) | 0.40 | Shewana3_1785 | | glutamate dehydrogenase (NAD) (RefSeq) | low | > 73 |
| Pseudomonas simiae WCS417 | 0.41 | PS417_04100 | | chemotaxis protein CheY | 0.39 | PS417_15075 | | NAD-glutamate dehydrogenase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.41 | PFLU_RS04140 | | response regulator transcription factor | 0.38 | PFLU_RS17095 | | NAD-glutamate dehydrogenase | low | > 109 |
| Pseudomonas stutzeri RCH2 | 0.41 | Psest_3338 | | Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain | 0.39 | Psest_1944 | | NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form (from data) | low | > 67 |
| Shewanella loihica PV-4 | 0.41 | Shew_3342 | | two component Fis family transcriptional regulator (RefSeq) | 0.40 | Shew_1809 | | NAD-glutamate dehydrogenase (RefSeq) | low | > 60 |
| Kangiella aquimarina DSM 16071 | 0.39 | B158DRAFT_1932 | | Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain | 0.40 | B158DRAFT_0998 | | NAD-specific glutamate dehydrogenase | low | > 40 |
| Shewanella amazonensis SB2B | 0.39 | Sama_3186 | | response regulator receiver protein (RefSeq) | 0.40 | Sama_1592 | | hypothetical protein (RefSeq) | low | > 62 |
| Caulobacter crescentus NA1000 Δfur | 0.37 | CCNA_01845 | | two-component response regulator protein | 0.34 | CCNA_00086 | | NAD-specific glutamate dehydrogenase GdhZ | — | — |
| Caulobacter crescentus NA1000 | 0.37 | CCNA_01845 | | two-component response regulator protein | 0.34 | CCNA_00086 | | NAD-specific glutamate dehydrogenase GdhZ | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.37 | A4249_RS04475 | | response regulator transcription factor | 0.31 | A4249_RS13510 | | NAD-glutamate dehydrogenase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.37 | RR42_RS01085 | | chemotaxis protein CheY | 0.39 | RR42_RS07270 | | NAD-glutamate dehydrogenase | low | > 128 |
| Rhizobium sp. OAE497 | 0.36 | ABIE40_RS19505 | | ActR/PrrA/RegA family redox response regulator transcription factor | 0.31 | ABIE40_RS19120 | | NAD-glutamate dehydrogenase | low | > 107 |
| Azospirillum sp. SherDot2 | 0.36 | MPMX19_06181 | | Photosynthetic apparatus regulatory protein RegA | 0.40 | MPMX19_04621 | | NAD-specific glutamate dehydrogenase | — | — |
| Azospirillum brasilense Sp245 | 0.36 | AZOBR_RS23150 | | chemotaxis protein CheY | 0.41 | AZOBR_RS00190 | | L-glutamate dehydrogenase (NAD+) (EC 1.4.1.2) (from data) | 0.34 | 40 |
| Sinorhizobium meliloti 1021 | 0.36 | SMc02584 | | transcriptional regulator | 0.31 | SMc04085 | | hypothetical protein | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.35 | Ga0059261_1560 | | Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain | 0.29 | Ga0059261_1252 | | NAD-specific glutamate dehydrogenase | — | — |
| Agrobacterium fabrum C58 | 0.35 | Atu0050 | | two component response regulator | 0.32 | Atu2766 | | NAD-glutamate dehydrogenase | low | > 89 |
| Lysobacter sp. OAE881 | 0.35 | ABIE51_RS09795 | | response regulator transcription factor | 0.68 | ABIE51_RS09105 | | NAD-glutamate dehydrogenase domain-containing protein | — | — |
| Marinobacter adhaerens HP15 | 0.34 | HP15_3981 | | two component transcriptional regulator, Fis family | 0.38 | HP15_2269 | | NAD-specific glutamate dehydrogenase | low | > 73 |
| Bosea sp. OAE506 | 0.34 | ABIE41_RS03875 | | ActR/PrrA/RegA family redox response regulator transcription factor | 0.33 | ABIE41_RS04780 | | NAD-glutamate dehydrogenase | 0.39 | 28 |
Not shown: 9 genomes with orthologs for Xcc-8004.3041.1 only; 5 genomes with orthologs for Xcc-8004.2182.1 only