Conservation of cofitness between Xcc-8004.4046.1 and Xcc-8004.1359.1 in Xanthomonas campestris pv. campestris strain 8004

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.4046.1 ATP-dependent protease La (EC 3.4.21.53) Type I 1.0 Xcc-8004.1359.1 NAD synthetase (EC 6.3.1.5) / Glutamine amidotransferase chain of NAD synthetase 0.57 13
Lysobacter sp. OAE881 0.82 ABIE51_RS14145 endopeptidase La 0.76 ABIE51_RS04875 NAD+ synthase — —
Dyella japonica UNC79MFTsu3.2 0.74 ABZR86_RS07320 endopeptidase La 0.52 ABZR86_RS10980 NAD+ synthase — —
Rhodanobacter sp. FW510-T8 0.73 OKGIIK_08030 lon endopeptidase La 0.47 OKGIIK_01780 NAD+ synthase low > 52
Rhodanobacter denitrificans FW104-10B01 0.73 LRK54_RS16735 endopeptidase La 0.49 LRK54_RS04975 NAD+ synthase — —
Rhodanobacter denitrificans MT42 0.73 LRK55_RS16460 endopeptidase La 0.49 LRK55_RS04755 NAD+ synthase — —
Ralstonia solanacearum GMI1000 0.65 RS_RS08655 endopeptidase La 0.40 RS_RS11780 NAD+ synthase — —
Ralstonia solanacearum PSI07 0.65 RPSI07_RS16135 endopeptidase La 0.40 RPSI07_RS13160 NAD+ synthase — —
Ralstonia solanacearum UW163 0.65 UW163_RS14650 endopeptidase La 0.40 UW163_RS09480 NAD+ synthase — —
Ralstonia solanacearum IBSBF1503 0.65 RALBFv3_RS01340 endopeptidase La 0.40 RALBFv3_RS04190 NAD+ synthase — —
Ralstonia sp. UNC404CL21Col 0.64 ABZR87_RS12785 endopeptidase La 0.40 ABZR87_RS16090 NAD+ synthase — —
Dechlorosoma suillum PS 0.64 Dsui_2198 ATP-dependent protease La 0.40 Dsui_1686 NAD+ synthetase — —
Herbaspirillum seropedicae SmR1 0.64 HSERO_RS12905 peptidase 0.31 HSERO_RS22865 NH(3)-dependent NAD(+) synthetase — —
Serratia liquefaciens MT49 0.64 IAI46_05020 endopeptidase La 0.45 IAI46_19455 NAD+ synthase — —
Marinobacter adhaerens HP15 0.63 HP15_2183 DNA-binding ATP-dependent protease La 0.46 HP15_525 NAD+ synthetase — —
Kangiella aquimarina DSM 16071 0.63 B158DRAFT_1038 ATP-dependent protease La 0.46 B158DRAFT_2529 NAD synthase — —
Cupriavidus basilensis FW507-4G11 0.63 RR42_RS09030 DNA-binding protein 0.10 RR42_RS35170 NAD synthetase — —
Burkholderia phytofirmans PsJN 0.63 BPHYT_RS09460 peptidase 0.41 BPHYT_RS05480 NAD synthetase — —
Paraburkholderia bryophila 376MFSha3.1 0.63 H281DRAFT_00898 ATP-dependent proteinase. Serine peptidase. MEROPS family S16 0.42 H281DRAFT_00218 NAD+ synthase (glutamine-hydrolysing) — —
Azospirillum brasilense Sp245 0.62 AZOBR_RS07145 peptidase 0.41 AZOBR_RS04215 NAD synthetase low > 97
Azospirillum sp. SherDot2 0.62 MPMX19_01545 Lon protease 0.32 MPMX19_03478 Glutamine-dependent NAD(+) synthetase low > 112
Acidovorax sp. GW101-3H11 0.62 Ac3H11_937 ATP-dependent protease La (EC 3.4.21.53) Type I 0.46 Ac3H11_517 NAD synthetase (EC 6.3.1.5) / Glutamine amidotransferase chain of NAD synthetase low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF4044 ATP-dependent protease La (EC 3.4.21.53) Type I 0.42 GFF4271 NAD synthetase (EC 6.3.1.5) / Glutamine amidotransferase chain of NAD synthetase low > 90
Paraburkholderia graminis OAS925 0.61 ABIE53_002117 ATP-dependent Lon protease 0.41 ABIE53_001345 NAD+ synthase (glutamine-hydrolyzing) low > 113
Rhodospirillum rubrum S1H 0.61 Rru_A1552 Peptidase S16, ATP-dependent protease La (NCBI) 0.37 Rru_A0687 NAD(+) synthase (glutamine-hydrolyzing) (NCBI) — —
Magnetospirillum magneticum AMB-1 0.60 AMB_RS14035 endopeptidase La 0.38 AMB_RS06260 NAD+ synthase — —
Variovorax sp. SCN45 0.60 GFF487 ATP-dependent protease La (EC 3.4.21.53) Type I 0.44 GFF1150 NAD synthetase (EC 6.3.1.5) / Glutamine amidotransferase chain of NAD synthetase low > 127
Agrobacterium fabrum C58 0.59 Atu1261 ATP-dependent protease LA 0.38 Atu1657 NAD (+) synthetase — —
Rhodopseudomonas palustris CGA009 0.59 TX73_015345 endopeptidase La 0.42 TX73_010235 NAD+ synthase — —
Rhizobium sp. OAE497 0.58 ABIE40_RS07100 endopeptidase La 0.40 ABIE40_RS10475 NAD+ synthase — —
Sinorhizobium meliloti 1021 0.58 SMc01905 ATP-dependent protease LA protein 0.41 SMc00161 NAD synthetase — —
Phaeobacter inhibens DSM 17395 0.57 PGA1_c20540 ATP-dependent protease La 0.36 PGA1_c26450 glutamine-dependent NAD(+) synthetase NadE — —
Dinoroseobacter shibae DFL-12 0.56 Dshi_1777 ATP-dependent protease La (RefSeq) 0.35 Dshi_0601 NAD+ synthetase (RefSeq) — —
Desulfovibrio vulgaris Miyazaki F 0.53 DvMF_0112 ATP-dependent protease La (RefSeq) 0.34 DvMF_0449 NAD+ synthetase (RefSeq) — —
Desulfovibrio vulgaris Hildenborough JW710 0.52 DVU1337 lon ATP-dependent protease La (TIGR) 0.34 DVU1610 nadE glutamine-dependent NAD+ synthetase (TIGR) — —
Acinetobacter radioresistens SK82 0.51 MPMX26_02299 Lon protease 0.42 MPMX26_00744 Glutamine-dependent NAD(+) synthetase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.43 CA264_00045 endopeptidase La 0.13 CA264_00760 NAD(+) synthase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.42 ABZR88_RS15670 endopeptidase La 0.33 ABZR88_RS04215 NAD+ synthase — —
Bacteroides stercoris CC31F 0.41 HMPREF1181_RS14340 endopeptidase La 0.12 HMPREF1181_RS04530 NAD(+) synthase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.41 Echvi_4670 ATP-dependent protease La 0.12 Echvi_2312 NAD+ synthetase — —
Pedobacter sp. GW460-11-11-14-LB5 0.40 CA265_RS14555 endopeptidase La 0.34 CA265_RS23995 NAD+ synthase — —
Parabacteroides merdae CL09T00C40 0.40 HMPREF1078_RS16185 endopeptidase La 0.12 HMPREF1078_RS01210 NAD(+) synthase — —
Bacteroides ovatus ATCC 8483 0.39 BACOVA_02571 endopeptidase La 0.12 BACOVA_01230 NAD+ synthase — —
Phocaeicola vulgatus CL09T03C04 0.39 HMPREF1058_RS01210 endopeptidase La 0.12 HMPREF1058_RS15890 NAD(+) synthase — —
Phocaeicola dorei CL03T12C01 0.39 ABI39_RS16520 endopeptidase La 0.12 ABI39_RS11850 NAD(+) synthase — —

Not shown: 53 genomes with orthologs for Xcc-8004.4046.1 only; 3 genomes with orthologs for Xcc-8004.1359.1 only