| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Rhodopseudomonas palustris CGA009 | 1.0 | TX73_008175 | | glutamate racemase | 1.0 | TX73_015380 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.50 | 17 |
| Sinorhizobium meliloti 1021 | 0.48 | SMc00483 | | glutamate racemase | 0.37 | SMc00946 | | hypothetical protein | low | > 103 |
| Rhizobium sp. OAE497 | 0.46 | ABIE40_RS10265 | | glutamate racemase | 0.40 | ABIE40_RS09345 | | NAD(P)H-hydrate dehydratase | low | > 107 |
| Bosea sp. OAE506 | 0.46 | ABIE41_RS13570 | | glutamate racemase | 0.38 | ABIE41_RS16885 | | NAD(P)H-hydrate dehydratase | low | > 77 |
| Agrobacterium fabrum C58 | 0.45 | Atu1867 | | glutamate racemase | 0.34 | Atu1768 | | hypothetical protein | low | > 89 |
| Castellaniella sp019104865 MT123 | 0.44 | ABCV34_RS13570 | | glutamate racemase | 0.41 | ABCV34_RS02980 | | NAD(P)H-hydrate dehydratase | low | > 48 |
| Serratia liquefaciens MT49 | 0.34 | IAI46_24445 | | glutamate racemase | 0.18 | IAI46_01600 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.34 | CSW01_00800 | | glutamate racemase | 0.18 | CSW01_14940 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.33 | GFF2353 | | Glutamate racemase (EC 5.1.1.3) | 0.17 | GFF820 | | NAD(P)HX epimerase / NAD(P)HX dehydratase | — | — |
| Shewanella sp. ANA-3 | 0.33 | Shewana3_0180 | | glutamate racemase (RefSeq) | 0.19 | Shewana3_0592 | | carbohydrate kinase, YjeF related protein (RefSeq) | — | — |
| Erwinia tracheiphila SCR3 | 0.33 | LU632_RS19545 | murI | glutamate racemase | 0.17 | LU632_RS02030 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | — | — |
| Klebsiella michiganensis M5al | 0.32 | BWI76_RS00895 | | glutamate racemase | 0.20 | BWI76_RS02510 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.32 | Ga0059261_2446 | | glutamate racemase (EC 5.1.1.3) | 0.23 | Ga0059261_0649 | | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region | — | — |
| Escherichia coli ECOR27 | 0.32 | NOLOHH_05670 | murI | glutamate racemase | 0.18 | NOLOHH_04545 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | — | — |
| Escherichia coli ECRC62 | 0.32 | BNILDI_05855 | murI | glutamate racemase | 0.18 | BNILDI_06945 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.32 | OHPLBJKB_04083 | | Glutamate racemase | 0.18 | OHPLBJKB_03875 | | Bifunctional NAD(P)H-hydrate repair enzyme Nnr | — | — |
| Escherichia fergusonii Becca | 0.31 | EFB2_04643 | | Glutamate racemase | 0.18 | EFB2_04368 | | Bifunctional NAD(P)H-hydrate repair enzyme Nnr | — | — |
| Escherichia coli ECRC102 | 0.31 | NIAGMN_11275 | murI | glutamate racemase | 0.18 | NIAGMN_10130 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | — | — |
| Escherichia coli ECRC100 | 0.31 | OKFHMN_13525 | murI | glutamate racemase | 0.18 | OKFHMN_12280 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | — | — |
| Shewanella loihica PV-4 | 0.31 | Shew_0139 | | glutamate racemase (RefSeq) | 0.15 | Shew_0561 | | carbohydrate kinase, YjeF-related protein (RefSeq) | — | — |
| Escherichia coli ECRC99 | 0.31 | KEDOAH_14635 | murI | glutamate racemase | 0.18 | KEDOAH_15875 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | — | — |
| Escherichia coli Nissle 1917 | 0.31 | ECOLIN_RS22910 | | glutamate racemase | 0.18 | ECOLIN_RS24205 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | — | — |
| Escherichia coli ECRC101 | 0.31 | MCAODC_04025 | murI | glutamate racemase | 0.18 | MCAODC_02795 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | — | — |
| Escherichia coli ECOR38 | 0.31 | HEPCGN_12180 | murI | glutamate racemase | 0.18 | HEPCGN_10510 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | — | — |
| Escherichia coli ECRC98 | 0.31 | JDDGAC_17150 | murI | glutamate racemase | 0.18 | JDDGAC_15920 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | — | — |
| Escherichia coli BL21 | 0.31 | ECD_03852 | | glutamate racemase | 0.18 | ECD_04034 | | bifunctional NAD(P)H-hydrate repair enzyme; C-terminal domain ADP-dependent (S)-NAD(P)H-hydrate dehydratase and N-terminal domain NAD(P)H-hydrate epimerase | — | — |
| Escherichia coli BW25113 | 0.31 | b3967 | murI | glutamate racemase, required for biosynthesis of D-glutamate and peptidoglycan (VIMSS) | 0.18 | b4167 | yjeF | predicted carbohydrate kinase (NCBI) | — | — |
| Enterobacter sp. TBS_079 | 0.30 | MPMX20_04513 | | Glutamate racemase | 0.17 | MPMX20_00448 | | Bifunctional NAD(P)H-hydrate repair enzyme Nnr | — | — |
| Enterobacter asburiae PDN3 | 0.30 | EX28DRAFT_4430 | | glutamate racemase (EC 5.1.1.3) | 0.18 | EX28DRAFT_3364 | | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region | — | — |
| Shewanella amazonensis SB2B | 0.29 | Sama_0194 | | glutamate racemase (RefSeq) | 0.17 | Sama_3030 | | YjeF protein (RefSeq) | — | — |
| Marinobacter adhaerens HP15 | 0.28 | HP15_803 | | glutamate racemase | 0.18 | HP15_2504 | | carbohydrate kinase, YjeF related protein | — | — |
| Variovorax sp. OAS795 | 0.23 | ABID97_RS17555 | | glutamate racemase | 0.13 | ABID97_RS17190 | | NAD(P)H-hydrate dehydratase | — | — |
| Pseudomonas sp. S08-1 | 0.22 | OH686_07895 | | glutamate racemase | 0.20 | OH686_09495 | | NAD(P)H-hydrate epimerase / ADP-dependent (S)-NAD(P)H-hydrate dehydratase | — | — |
| Variovorax sp. SCN45 | 0.22 | GFF484 | | Glutamate racemase (EC 5.1.1.3) | 0.12 | GFF397 | | NAD(P)H-hydrate epimerase (EC 5.1.99.6) / ADP-dependent (S)-NAD(P)H-hydrate dehydratase (EC 4.2.1.136) | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.22 | PfGW456L13_1585 | | Glutamate racemase (EC 5.1.1.3) | 0.20 | PfGW456L13_159 | | NAD(P)HX epimerase / NAD(P)HX dehydratase | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.22 | Psyr_0952 | | glutamate racemase | 0.18 | Psyr_0567 | | Protein of unknown function UPF0031:YjeF-related protein, N-terminal | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.22 | Psyr_0952 | | glutamate racemase | 0.18 | Psyr_0567 | | Protein of unknown function UPF0031:YjeF-related protein, N-terminal | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.22 | Pf1N1B4_2922 | | Glutamate racemase (EC 5.1.1.3) | 0.20 | Pf1N1B4_1417 | | NAD(P)HX epimerase / NAD(P)HX dehydratase | — | — |
| Pseudomonas sp. RS175 | 0.22 | PFR28_03652 | | Glutamate racemase 2 | 0.22 | PFR28_05116 | | Bifunctional NAD(P)H-hydrate repair enzyme Nnr | — | — |
| Ralstonia solanacearum PSI07 | 0.21 | RPSI07_RS14860 | | glutamate racemase | 0.21 | RPSI07_RS16180 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | low | > 81 |
| Pseudomonas fluorescens FW300-N2E2 | 0.21 | Pf6N2E2_5224 | | Glutamate racemase (EC 5.1.1.3) | 0.22 | Pf6N2E2_3619 | | NAD(P)HX epimerase / NAD(P)HX dehydratase | — | — |
| Ralstonia solanacearum GMI1000 | 0.21 | RS_RS09835 | | glutamate racemase | 0.22 | RS_RS08700 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | low | > 80 |
| Ralstonia sp. UNC404CL21Col | 0.21 | ABZR87_RS14380 | | glutamate racemase | 0.23 | ABZR87_RS12740 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | low | > 80 |
| Pseudomonas fluorescens FW300-N2E3 | 0.21 | AO353_14800 | | glutamate racemase | 0.21 | AO353_13120 | | carbohydrate kinase | — | — |
| Pseudomonas stutzeri RCH2 | 0.21 | Psest_1116 | | glutamate racemase | 0.23 | Psest_0678 | | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.21 | AO356_16510 | | glutamate racemase | 0.23 | AO356_08680 | | carbohydrate kinase | — | — |
| Mycobacterium tuberculosis H37Rv | 0.20 | Rv1338 | | Probable glutamate racemase MurI | 0.16 | Rv3433c | | Conserved protein | — | — |
| Acidovorax sp. GW101-3H11 | 0.20 | Ac3H11_940 | | Glutamate racemase (EC 5.1.1.3) | 0.12 | Ac3H11_415 | | NAD(P)HX epimerase / NAD(P)HX dehydratase | — | — |
| Phocaeicola vulgatus CL09T03C04 | 0.19 | HMPREF1058_RS09645 | | glutamate racemase | 0.18 | HMPREF1058_RS00705 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | — | — |
| Bifidobacterium breve UCC2003 | 0.19 | BBR_RS13695 | | glutamate racemase | 0.09 | BBR_RS15480 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.19 | Echvi_4654 | | glutamate racemase | 0.18 | Echvi_0073 | | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region | low | > 79 |
| Magnetospirillum magneticum AMB-1 | 0.18 | AMB_RS17835 | | glutamate racemase | 0.38 | AMB_RS14075 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | — | — |
| Phocaeicola dorei CL03T12C01 | 0.18 | ABI39_RS07035 | | glutamate racemase | 0.18 | ABI39_RS08310 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.18 | CA264_01685 | | glutamate racemase | 0.20 | CA264_16280 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | — | — |
| Bacteroides thetaiotaomicron VPI-5482 | 0.18 | BT3722 | | glutamate racemase (NCBI ptt file) | 0.20 | BT4383 | | putative sugar kinase (NCBI ptt file) | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.18 | CA265_RS15060 | | glutamate racemase | 0.19 | CA265_RS24885 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.17 | ABZR88_RS15760 | | glutamate racemase | 0.17 | ABZR88_RS18865 | | NAD(P)H-hydrate dehydratase | low | > 71 |
| Azospirillum brasilense Sp245 | 0.16 | AZOBR_RS08075 | | glutamate racemase | 0.44 | AZOBR_RS07115 | | hypothetical protein | low | > 97 |
| Azospirillum sp. SherDot2 | 0.11 | MPMX19_01787 | | Glutamate racemase | 0.45 | MPMX19_01552 | | Bifunctional NAD(P)H-hydrate repair enzyme Nnr | — | — |
Not shown: 8 genomes with orthologs for TX73_008175 only; 32 genomes with orthologs for TX73_015380 only