Conservation of cofitness between TX73_019540 and TX73_006050 in Rhodopseudomonas palustris CGA009

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_019540 FAD-dependent oxidoreductase 1.0 TX73_006050 aspartate aminotransferase family protein 0.62 5
Rhizobium sp. OAE497 0.54 ABIE40_RS03380 FAD-binding oxidoreductase 0.60 ABIE40_RS13520 aspartate aminotransferase family protein low > 107
Sinorhizobium meliloti 1021 0.53 SMc00797 oxidoreductase 0.60 SMc01534 omega amino acid--pyruvate transaminase low > 103
Ralstonia solanacearum PSI07 0.53 RPSI07_RS07505 FAD-binding oxidoreductase 0.54 RPSI07_RS04875 aspartate aminotransferase family protein low > 81
Paraburkholderia bryophila 376MFSha3.1 0.53 H281DRAFT_03160 D-amino-acid dehydrogenase 0.54 H281DRAFT_01578 beta-alanine--pyruvate transaminase — —
Ralstonia solanacearum IBSBF1503 0.52 RALBFv3_RS16195 FAD-binding oxidoreductase 0.54 RALBFv3_RS18720 aspartate aminotransferase family protein low > 76
Ralstonia solanacearum UW163 0.52 UW163_RS16930 FAD-binding oxidoreductase 0.54 UW163_RS20410 aspartate aminotransferase family protein — —
Paraburkholderia graminis OAS925 0.52 ABIE53_004136 D-amino-acid dehydrogenase 0.54 ABIE53_004258 beta-alanine--pyruvate transaminase low > 113
Pseudomonas putida KT2440 0.52 PP_3596 D-lysine oxidase 0.46 PP_0596 Omega-amino acid--pyruvate aminotransferase low > 96
Bosea sp. OAE506 0.51 ABIE41_RS13575 FAD-binding oxidoreductase 0.68 ABIE41_RS23295 aspartate aminotransferase family protein low > 77
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS10270 D-amino acid dehydrogenase 0.55 BPHYT_RS21555 beta alanine--pyruvate aminotransferase low > 109
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS12475 FAD-binding oxidoreductase 0.56 QEN71_RS18155 aspartate aminotransferase family protein low > 153
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS23145 FAD-binding oxidoreductase 0.55 ABZR87_RS19660 aspartate aminotransferase family protein low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF267 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.48 GFF2738 Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18) low > 90
Shewanella loihica PV-4 0.24 Shew_2360 D-hydroxyproline dehydrogenase (from data) 0.53 Shew_0966 beta alanine--pyruvate transaminase (RefSeq) low > 60
Ralstonia solanacearum GMI1000 0.23 RS_RS02525 FAD-dependent oxidoreductase 0.54 RS_RS22230 aspartate aminotransferase family protein low > 80
Shewanella amazonensis SB2B 0.23 Sama_1533 D-amino-acid dehydrogenase (RefSeq) 0.57 Sama_2649 beta alanine--pyruvate transaminase (RefSeq) low > 62
Castellaniella sp019104865 MT123 0.21 ABCV34_RS10190 FAD-dependent oxidoreductase 0.52 ABCV34_RS07415 aspartate aminotransferase family protein low > 48
Pseudomonas fluorescens SBW25 0.21 PFLU_RS16215 FAD-binding oxidoreductase 0.45 PFLU_RS03325 aspartate aminotransferase family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.21 PFLU_RS16215 FAD-binding oxidoreductase 0.45 PFLU_RS03325 aspartate aminotransferase family protein low > 109
Pseudomonas fluorescens GW456-L13 0.21 PfGW456L13_3586 D-amino acid dehydrogenase (EC 1.4.99.1) family protein in hydroxy-L-proline catabolic cluster 0.44 PfGW456L13_3 Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18) low > 87
Agrobacterium fabrum C58 0.20 Atu3364 D-amino acid dehydrogenase 0.57 Atu3329 beta alanine--pyruvate transaminase low > 89
Pseudomonas simiae WCS417 0.19 PS417_14320 FAD-dependent oxidoreductase 0.49 PS417_11165 omega amino acid--pyruvate aminotransferase — —
Rhodospirillum rubrum S1H 0.19 Rru_A2064 FAD dependent oxidoreductase (NCBI) 0.49 Rru_A1541 Aminotransferase class-III (NCBI) low > 58
Herbaspirillum seropedicae SmR1 0.19 HSERO_RS22955 D-amino acid dehydrogenase 0.54 HSERO_RS23240 omega amino acid--pyruvate aminotransferase low > 78
Azospirillum sp. SherDot2 0.18 MPMX19_04536 D-amino acid dehydrogenase 1 0.50 MPMX19_05489 Beta-alanine--pyruvate aminotransferase low > 112
Phaeobacter inhibens DSM 17395 0.18 PGA1_c05140 D-amino acid dehydrogenase small subunit 0.28 PGA1_c07810 aminotransferase class-III 0.21 61
Cupriavidus basilensis FW507-4G11 0.18 RR42_RS09075 amino acid dehydrogenase 0.53 RR42_RS01575 omega amino acid--pyruvate aminotransferase low > 128
Xanthomonas campestris pv. campestris strain 8004 0.17 Xcc-8004.1916.1 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.54 Xcc-8004.2192.1 Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18) low > 74
Pseudomonas fluorescens FW300-N2E2 0.16 Pf6N2E2_4391 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.44 Pf6N2E2_3463 Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18) low > 103
Variovorax sp. OAS795 0.16 ABID97_RS22385 D-amino acid dehydrogenase 0.48 ABID97_RS09320 aspartate aminotransferase family protein low > 91
Pseudomonas sp. S08-1 0.16 OH686_13685 D-amino acid dehydrogenase 0.46 OH686_07315 Omega-amino acid--pyruvate aminotransferase low > 80
Pseudomonas fluorescens FW300-N2C3 0.16 AO356_12620 amino acid dehydrogenase 0.44 AO356_07955 omega amino acid--pyruvate aminotransferase low > 104
Pseudomonas sp. RS175 0.16 PFR28_04399 D-amino acid dehydrogenase 1 0.44 PFR28_05262 Omega-amino acid--pyruvate aminotransferase 0.44 39
Pseudomonas fluorescens FW300-N2E3 0.16 AO353_09155 amino acid dehydrogenase 0.45 AO353_06085 omega amino acid--pyruvate aminotransferase 0.36 58
Pseudomonas fluorescens FW300-N1B4 0.16 Pf1N1B4_2144 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.45 Pf1N1B4_1239 Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18) 0.26 64
Variovorax sp. SCN45 0.16 GFF1773 D-amino acid dehydrogenase (EC 1.4.99.6) 0.55 GFF918 Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18) low > 127
Pseudomonas stutzeri RCH2 0.16 Psest_3793 D-alanine dehydrogenase (EC 1.4.99.-) (from data) 0.59 Psest_4306 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.15 Psyr_0235 D-amino acid dehydrogenase small subunit 0.45 Psyr_0678 Aminotransferase class-III low > 86
Pseudomonas syringae pv. syringae B728a 0.15 Psyr_0235 D-amino acid dehydrogenase small subunit 0.45 Psyr_0678 Aminotransferase class-III low > 86
Dinoroseobacter shibae DFL-12 0.14 Dshi_0558 D-amino-acid dehydrogenase (RefSeq) 0.59 Dshi_1366 aminotransferase class-III (RefSeq) low > 64
Azospirillum brasilense Sp245 0.14 AZOBR_RS08020 D-alanine dehydrogenase (EC 1.4.99.-) (from data) 0.48 AZOBR_RS22505 omega amino acid--pyruvate aminotransferase low > 97
Klebsiella michiganensis M5al 0.14 BWI76_RS17735 D-amino acid dehydrogenase small subunit 0.22 BWI76_RS14455 aspartate aminotransferase family protein low > 92
Acidovorax sp. GW101-3H11 0.13 Ac3H11_1644 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.46 Ac3H11_4342 Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18) low > 79
Magnetospirillum magneticum AMB-1 0.13 AMB_RS14080 D-amino-acid dehydrogenase 0.24 AMB_RS08515 aspartate aminotransferase family protein — —
Serratia liquefaciens MT49 0.12 IAI46_14460 D-amino acid dehydrogenase 0.46 IAI46_02645 aspartate aminotransferase family protein 0.47 37

Not shown: 35 genomes with orthologs for TX73_019540 only; 7 genomes with orthologs for TX73_006050 only